BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890380
Length=1182
Score E
Sequences producing significant alignments: (Bits) Value
AT4G18195.1 | Symbols: ATPUP8, PUP8 | purine permease 8 | chr4:... 1853 0.0
AT4G18197.1 | Symbols: ATPUP7, PEX17, PUP7 | purine permease 7 ... 1094 0.0
AT4G18205.1 | Symbols: | Nucleotide-sugar transporter family p... 972 0.0
> AT4G18195.1 | Symbols: ATPUP8, PUP8 | purine permease 8 | chr4:10069694-10071115
FORWARD LENGTH=1350
Length=1350
Score = 1853 bits (1003), Expect = 0.0
Identities = 1127/1187 (95%), Gaps = 7/1187 (1%)
Strand=Plus/Plus
Query 1 ATGGAAAGAACTCAAG-AACTCTATGTCAATGATGATCAGAACATAGAAGCAAACCTAAC 59
||||||| |||||||| || |||||||||||||| || | ||||||||||||||||||||
Sbjct 25 ATGGAAATAACTCAAGTAA-TCTATGTCAATGATCATAACAACATAGAAGCAAACCTAAC 83
Query 60 AGGTCAGGAGGAAATGAATACCACCATGAAAATCGAATCTTCGTCTGTTCCTCAATCGAA 119
|||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||
Sbjct 84 AGGTCAGGAGGAAATGAATACCACCATGGAAATCGAATCTTCGTCCGTACCTCAATCGAA 143
Query 120 GAATTATAAGAAATGGCTTCGTATTTTCATTTATGTGTTCTTTGTCCTTGCCTGCCAAGC 179
||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||
Sbjct 144 GAACTATAAGAAATGGCTTCGTATTTCCATTTACGTGTTCTTTGTCCTTGCTTGCCAAGC 203
Query 180 ACTTTCTACAATTTTGGGCAGAGTGTACTATGAAAATGGTGGGAAGAGTACATGGATGGG 239
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 204 ACTTTCTACAATTTTGGGCAGAGTTTACTATGAAAATGGTGGGAAGAGTACATGGATGGG 263
Query 240 AACACTTGTCCAACTAATCGGCTTCCCTGTTCTGTTTCTCTTCCGCTTCTTTTCCCGAAT 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 264 AACACTTGTCCAACTAATCGGCTTCCCTGTTCTGTTTCTCTTCCGCTTCTTTTCCCAAAC 323
Query 300 CAAAAATTCCAAATCAACAGATGCAGATTACAGAAAGTTCTCTTCCTACACCATTCTTGG 359
||||||| ||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||
Sbjct 324 CAAAAATCCCAAACCAACAGAAGCAGATTTCAGAAAGTTCTCTTCCTTCACCATTCTTGG 383
Query 360 ATCAGTTTACATTGTTACTGGACTGTTAGTGTCTGCTAATTCTTATATGTCCTCTGTTGG 419
|||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 384 ATCAGTTTACATCGTTACTGGACTATTAGTGTCTGCTAACTCTTATATGTCCTCTGTTGG 443
Query 420 TTTACTATACTTACCTGTTTCTACTTTCTCCCTCATCTTGGCCTCACAATTGGCCTTCAC 479
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 TTTACTATACTTACCAGTTTCTACTTTCTCCCTCATCTTGGCCTCACAATTGGCCTTCAC 503
Query 480 TGCCTTCTTCTCATATTTCCTAAACTCGCAGAAGTTCACACCTTTCATTGTGAATTCTCT 539
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 504 TGCCTTCTTCTCATATTTTCTAAACTCGCAGAAGTTCACACCTTTCATTGTGAATTCTCT 563
Query 540 ATTCCTCCTCACTATTTCCTCTGCCCTCCTCGTGGTAAACACTGATTCGGAAACCACAGC 599
|| ||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 564 GTTTCTCCTTACTATTTCCTCTGCCCTCCTCGTGGTCAACACTGATTCGGAAAACACAGC 623
Query 600 AAAAGTTTCTAGAGTAAAATATGTGATAGGGATCATATGTACCATTGGTGCTTCTGCTGG 659
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 624 AAAAGTGTCTAGAGTAAAATATGTGATAGGGATAATATGTACCATTGGTGCTTCTGCTGG 683
Query 660 GATTGGACTGCTGCTATCTCTGGTACAACTGATCCTCAGGAAGGTTTTAAAGAAGCAAAC 719
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 684 GATTGGATTGCTGCTATCCCTGGTACAACTGATCCTCAGGAAGGTTTTAAAGAAGCAAAC 743
Query 720 ATTCTCAACGGTTACGGACCTGGTCGCTTACCAATCTCTAGTTGCAAGCTGTGTGGTTCT 779
|||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 744 ATTCTCAACGGTCACTGACTTGGTCGCTTACCAATCTCTAGTTGCAAGCTGTGTGGTTCT 803
Query 780 CATAGGACTTTTCGCAAGCGGAGAGTGGAAAACTTTAACAAGTGAGATGGAAAACTACCA 839
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 804 CATAGGACTTTTCGCAAGCGGGGAGTGGAAAACTTTAACAAGTGAGATGGAAAACTACAA 863
Query 840 ACTGGGGAAAGCGCCATACGTTCTGACTTTGGCCTCGATAGCTATTTCCTGGCAAGTCTA 899
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 864 ACTGGGGAAAGTGCCATACGTTATGACTTTGGCCTCGATAGCTATTTCCTGGCAAGTCTA 923
Query 900 CACCATTGGTGTTGTGGGACTGATCTTCGAGTCATCCTCTGTGTTCTCCAATTCCATAAC 959
||||||||| || |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 924 CACCATTGGCGTCGTGGGACTGATCTTTGAGTCATCTTCTGTGTTCTCCAATTCCATAAC 983
Query 960 AGCTGTGGGATTGCCTATAGTTCCAGTTGTAGCAGTGATAGTTTTCCATGATAGAATGAA 1019
|||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 984 TGCTGTGGGATTGCCTATAGTTCCAGTTGTAGCAGTGATTGTTTTCCATGATAAAATGAA 1043
Query 1020 CGCGTCAAAGATCTTCTCCATCGTTTTAGCTATCTGGGGCTTCATTTCATTTGTCTATCA 1079
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct 1044 CGCGTCAAAGATCTTCTCCATCATTTTAGCTATCTGGGGATTCATTTCATTTGTCTATCA 1103
Query 1080 GCACTACCTCGATGAGAAA-AAGTTGAAGACTAGCCACACAAGTCCTGTTGGAGATCCTC 1138
|||||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1104 GCACTACCTCGACGA-AAAGAAGTTGAAGACTAGCCACACAAGTCCTGTAGGAGATCCTC 1162
Query 1139 ATCTAC--C-TGTTGAGGAAGGTCACACAAACATACAAAGTGTATGA 1182
|||||| | || |||||||||||||||||||||||| |||||||||
Sbjct 1163 ATCTACTACCTGCTGAGGAAGGTCACACAAACATACATAGTGTATGA 1209
> AT4G18197.1 | Symbols: ATPUP7, PEX17, PUP7 | purine permease
7 | chr4:10071634-10073236 FORWARD LENGTH=1521
Length=1521
Score = 1094 bits (592), Expect = 0.0
Identities = 1002/1197 (84%), Gaps = 39/1197 (3%)
Strand=Plus/Plus
Query 1 ATGGAAAGAACTCAAGAACTCTATGTCAATGATGATCAGAACATAGAAGCAAACCTAACA 60
||||| ||| ||||||||| ||||| ||||| ||| |||||| ||||||||||||| | |
Sbjct 142 ATGGACAGATCTCAAGAACACTATGCCAATGGTGACCAGAACTTAGAAGCAAACCTTATA 201
Query 61 GGTCAGGAGGAAATGAATACCACCATGAA-AATCGAATCTTC-GTCTGTTCCTC-AATCG 117
| ||| |||| || || | | |||| ||| ||| || | |||| |||| || ||
Sbjct 202 GATCATGAGG---TG-GTA--A-C-TGAATCATC--ATCATCAG-CTGTGCCTCAAACCG 250
Query 118 AAGAATTATAAGAA-ATGGCTTCGTATTTTCATTTATGTGTTCTTTGTCCT-TGCCTGCC 175
|||| ||||| || ||||||||| | | ||| || || |||||||||| | ||||
Sbjct 251 -AGAACTATAA-AAGGTGGCTTCGTGTCTCCATATACGTAATCTTTGTCCTCT-TTTGCC 307
Query 176 AAG-CACTTTCTACAATTTTGGGCAGAGTGTACTATGAAAATGGTGGGAAGAGTACATGG 234
|| |||| |||||||| |||| ||| |||||||||||||||| || || || ||||
Sbjct 308 -AGCCACTAGCTACAATTCTGGGTAGATTGTACTATGAAAATGGAGGAAATAGCACAT-- 364
Query 235 ATG-GG-AACACTTGTCCAACTAATCGGCTTCCCTGTTCTGTTTCTCTTCCGCTTCTTTT 292
||| || ||||||| | ||||| || ||||||||||| ||| |||| |||||||||||||
Sbjct 365 ATGTGGTAACACTTCTTCAACTCATTGGCTTCCCTGTACTGGTTCTGTTCCGCTTCTTTT 424
Query 293 CCCGAATCA-AAAATTCCAAATCAACAGATGCAGATTACAGAAAGTTCTCTTCCTACACC 351
| ||||||| || |||||||||||||| || ||| ||| ||| | |||||| ||||
Sbjct 425 CTCGAATCAGGCAA-CCCAAATCAACAGATACAAATTTCAGTCAGTCCCCTTCCTTCACC 483
Query 352 ATTCTTGGATCAGTTTACATTGT-TACTGGACTGTTAGTGTCTGCTAATTCTTATATGTC 410
| |||| ||| |||||| |||| ||||||||| ||||||| ||| || ||||| |||
Sbjct 484 ACCCTTGCATCGGTTTAC-TTGTGCACTGGACTGCTAGTGTCCGCTTATGCTTATTTGT- 541
Query 411 CT-CTGTTGGTTTACTATACTTACCTGTTTCTACTTTCTCCCTCATCTTGGCCTCACAAT 469
|| | || || || || |||||||| || ||||||||||||||||||||||||||||| |
Sbjct 542 CTGCAGTAGGGTTGCTCTACTTACCAGTCTCTACTTTCTCCCTCATCTTGGCCTCACAGT 601
Query 470 TGGCCTTCACTGCCTTCTTCTCATATTTCCTAAACTCGCAGAAGTTCACACCTTTCATTG 529
|||||||||||||||| |||||||||||||| |||||||| |||||||| ||||| || |
Sbjct 602 TGGCCTTCACTGCCTTTTTCTCATATTTCCTTAACTCGCAAAAGTTCACTCCTTTGATAG 661
Query 530 TGAATTCTCT-ATTCCTCCTCACTATTTCCTCTGCCCTCCTCGTGGTAAACACTGATTCG 588
| | |||| | || ||||||||| | |||||||| || || ||||| |||||||||||
Sbjct 662 TCAGTTCTTTGCTT-CTCCTCACTGTATCCTCTGCTCTTCTTGTGGTCAACACTGATTCA 720
Query 589 GAAACCACAGCAAAAGTTTCTAGAGTAAAATATGTGATAGGGATCATATGTACCATTGGT 648
|||| | || | || || ||||||||| | |||||||| ||| ||||||||||||| |||
Sbjct 721 GAAAACTCAACTAATGTATCTAGAGTACAGTATGTGATCGGGTTCATATGTACCATCGGT 780
Query 649 GCTTCTGCTGGGATTGGACTGCTGCTATCTCTGGTACAACTGATCCTCAGGAAGGTTTTA 708
||||| ||||||||||||||| | ||||||||| ||||| || || ||||||| |||||
Sbjct 781 GCTTCCGCTGGGATTGGACTGTTACTATCTCTGATACAAATGCTCTTCAGGAAAGTTTTC 840
Query 709 AAGAAGCAAACATTCTCAACGGTTACGGACCTGGTCGCTTACCAATCTCTAGTTGCAAGC 768
| |||||| |||| |||| | || |||||| ||| | |||||| ||||||||||| ||
Sbjct 841 ACGAAGCATACATCCTCAGCAGTCACGGACTTGGCCATTTACCAGTCTCTAGTTGCGAGT 900
Query 769 TGTGTGGTTCTCATAGGACTTTTCGCAAGCGGAGAGTGGAAAACTTTAACAAGTGAGATG 828
||||| ||||||||||||||||| ||||| ||||||||| ||||||| ||||||||||
Sbjct 901 TGTGTAGTTCTCATAGGACTTTTTGCAAGTGGAGAGTGGGAAACTTTGCCAAGTGAGAT- 959
Query 829 GA-AAACTACCAACTGGGGAAAGCGCCATACGTTCTGACTTTGGCCTCGATAGCTATTTC 887
|| ||||||| |||| ||||||| | |||| ||| ||||||| |||||| |||||||||
Sbjct 960 GAGAAACTACAAACTCGGGAAAGTGTCATATGTTTTGACTTTAGCCTCGGCAGCTATTTC 1019
Query 888 CTGGCAAGTCTACAC-CATTGGTGTTGTGGGACTGATCTTCGAGTCATCCTCTGTGTTCT 946
||||||||||||||| | ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1020 CTGGCAAGTCTACACTC-TTGGTCTTGTGGGATTGATCTTCGAGTCATCCTCTGTGTTCT 1078
Query 947 CCAATTCCATAACAGCTGTGGGATTGCCTATAGTTCCAGTTGTAGCAGTGATAGTTTTCC 1006
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1079 CCAATTCCATAACAGCTGTGGGATTGCCTATAGTTCCAGTTGCGGCAGTGATAGTTTTCC 1138
Query 1007 ATGATAGAATGAACGCGTCAAAGATCTTCTCCATCGTTTTAGCTATCTGGGGCTTCATTT 1066
||||||||||| |||| ||||| ||||||||||| ||||||||||||| |||||| |||
Sbjct 1139 ATGATAGAATGGACGCATCAAAAATCTTCTCCATTATTTTAGCTATCTGCGGCTTCCTTT 1198
Query 1067 CATTTGTCTATCAGCACTACCTCGATGAGAAA-AAGTTGAAGACTAGCCACACAAGTCCT 1125
|||| |||||||||||||||||||| || ||| |||||||| ||||||||||||||| ||
Sbjct 1199 CATTCGTCTATCAGCACTACCTCGACGA-AAAGAAGTTGAATACTAGCCACACAAGTGCT 1257
Query 1126 GTTGGAGATCCTCATCTACCTGTTGAGGAAGGTCACACAAACATACAAAGTGTATGA 1182
|| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1258 GTAGGAGATCTTCATCTACCTGTTGAGGAAGGTCACACAAACATACAAAGTGTGTGA 1314
> AT4G18205.1 | Symbols: | Nucleotide-sugar transporter family
protein | chr4:10073758-10075271 FORWARD LENGTH=1432
Length=1432
Score = 972 bits (526), Expect = 0.0
Identities = 889/1061 (84%), Gaps = 37/1061 (3%)
Strand=Plus/Plus
Query 87 GAAAATCGAATC-TTCGTCTGTTCCTCAATCGAAGAATTATAAGAAATGGCTTCGTATTT 145
|||| | ||||| || || || |||||| ||||||| | ||||| ||||| ||| | |
Sbjct 162 GAAACT-GAATCATT-TTCAGTACCTCAAACGAAGAACTGTAAGAGGTGGCTCCGTGTCT 219
Query 146 TCATTTATGTGTTCTTTGTC--CTTGCCTGCCAAGCACTTTCTACAATTTTGGGCAGAGT 203
||| || | |||||||| ||| ||||||| ||||| ||||| || |||| ||| |
Sbjct 220 CCATATACGCAATCTTTGTCATCTT--CTGCCAACCACTTGCTACAGTTCTGGGTAGACT 277
Query 204 GTACTATGAAAATGGTGGGAAGAGTACATGGATG-GG-AACACTTGTCCAACTAATCGGC 261
||||||||||||||| ||||| || |||| ||| || ||||||| | ||||| || |||
Sbjct 278 GTACTATGAAAATGGAGGGAAAAGCACAT--ATGTGGTAACACTTCTTCAACTCATTGGC 335
Query 262 TTCCCTGTTCTGTTTCTCTTCCGCTTCTTTTCCCGAATCA-AAAATTCCAAATCAACAGA 320
|||||||| ||| ||||||||||||||||||| ||||||| || |||||||||||||
Sbjct 336 TTCCCTGTACTGATTCTCTTCCGCTTCTTTTCTCGAATCAGGCAA-CCCAAATCAACAGA 394
Query 321 TGCAGATTACAGAAAGTTCTCTTCCTACACCATTCTTGGATCAGTTTACATTGT-TACTG 379
| || ||| ||| ||| | |||||| ||||| |||| ||| |||||| |||| ||||
Sbjct 395 TACAAATTTCAGTCAGTCCCCTTCCTTCACCACCCTTGCATCGGTTTAC-TTGTGCACTG 453
Query 380 GACTGTTAGTGTCTGCTAATTCTTATATGTCCT-CTGTTGGTTTACTATACTTACCTGTT 438
||||| ||||||||||| || ||||| ||| || | ||||| || || |||||||| ||
Sbjct 454 GACTGCTAGTGTCTGCTTATGCTTATTTGT-CTGCAGTTGGGTTGCTTTACTTACCAGTC 512
Query 439 TCTACTTTCTCCCTCATCTTGGCCTCACAATTGGCCTTCACTGCCTTCTTCTCATATTTC 498
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 513 TCTACTTTCTCCCTCATCTTGGCCTCACAGTTGGCCTTCACTGCCTTTTTCTCATATTTC 572
Query 499 CTAAACTCGCAGAAGTTCACACCTTTCATTGTGAATTCTCTATTCCTCCTCACTATTTCC 558
|| |||||||| |||||||| ||||| || || |||||| | || ||||| || |||||
Sbjct 573 CTTAACTCGCAAAAGTTCACTCCTTTGATAGTCAATTCTTTGTTTCTCCTTACGGTTTCC 632
Query 559 TCTGCCCTCCTCGTGGTAAACACTGATTCGGAAACCACAGCAAAAGTTTCTAGAGTAAAA 618
||||||||||||||||| ||||||||||| |||| |||| |||| || ||||||||| ||
Sbjct 633 TCTGCCCTCCTCGTGGTCAACACTGATTCAGAAAACACAACAAATGTATCTAGAGTACAA 692
Query 619 TATGTGATAGGGATCATATGTACCATTGGTGCTTCTGCTGGGATTGGACTGCTGCTATCT 678
|||||||| ||| |||| ||||||||||||||||| |||||||||||| || | ||||||
Sbjct 693 TATGTGATTGGGTTCATCTGTACCATTGGTGCTTCCGCTGGGATTGGATTGGTACTATCT 752
Query 679 CTGGTACAACTGATCCTCAGGAAGGTTTTAAAGAAGCAAACATTCTCAACGGTTAC-GGA 737
||| |||||||| || ||||||| ||||| | |||||| |||| |||| | | | | |||
Sbjct 753 CTGATACAACTGCTCTTCAGGAAAGTTTTCACGAAGCATACATCCTCAGCAG-TCCTGGA 811
Query 738 CCTGGTCGCTTACCAATCTCTAGTTGCAAGC-TGTGTGGTTCTCATAGGACT-TTTCGCA 795
| ||| | |||||| ||||||||||||| | |||||||| ||||||||||| ||| |||
Sbjct 812 CTTGGCCAATTACCAGTCTCTAGTTGCAA-CTTGTGTGGTACTCATAGGACTGTTT-GCA 869
Query 796 AGCGGAGAGTGGAAAACTTTAACAAGTGAGATGGA-AAACTACCAACTGGGGAAAGCGCC 854
|| |||||||||| |||| | |||||||||| || ||||||| |||||||||||| | |
Sbjct 870 AGTGGAGAGTGGAGAACTCTGCCAAGTGAGAT-GAGAAACTACAAACTGGGGAAAGTGTC 928
Query 855 ATACGT-TC-TGACTTTGGCCTCGA-TAGCTATTTCCTGGCAAGTCTACACCATTGG-TG 910
||| | || ||||||||||||| | |||||||| ||||||||| ||||| |||| ||
Sbjct 929 ATA--TATCTTGACTTTGGCCTC-AGCAGCTATTTTCTGGCAAGTATACACTGTTGGTTG 985
Query 911 TTGTGGGACTGATCTTCGAGTCATCCTCTGTGTTCTCCAATTCCATAACAGCTGTGGGAT 970
||||||| | ||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 986 -TGTGGGATTAATCTTCGAGTCTTCTTCTGTGTTCTCCAATTCCATAACTGCTGTGGGAC 1044
Query 971 TGCCTATAGTTCCAGTTGTAGCAGTGATAGTTTTCCATGATA-GAATGAACGCGTCAAAG 1029
|||||||||||||||||||||||||||||||||||||||||| || || | || ||||||
Sbjct 1045 TGCCTATAGTTCCAGTTGTAGCAGTGATAGTTTTCCATGATAAGA-TGGATGCATCAAAG 1103
Query 1030 ATCTTCTCCATCGTTTTAGCTATCTGGGGCTTCATTTCATTTGTCTATCAGCACTACCTC 1089
|| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1104 ATTTTCTCCATCATTTTAGCTATCTGGGGCTTCCTTTCATTTGTCTATCAGCACTACCTC 1163
Query 1090 GATGAGAAA-AAGTTGAAGACTAGCCACACAAGTCCTGTTG 1129
|| || ||| |||||||||||| |||| |||| |||||||
Sbjct 1164 GACGA-AAAGAAGTTGAAGACTTGCCAGACAAAACCTGTTG 1203
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58031830020
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5