BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890515
Length=1539
Score E
Sequences producing significant alignments: (Bits) Value
AT4G17080.1 | Symbols: | Histone H3 K4-specific methyltransfer... 2484 0.0
AT2G35170.1 | Symbols: | Histone H3 K4-specific methyltransfer... 965 0.0
> AT4G17080.1 | Symbols: | Histone H3 K4-specific methyltransferase
SET7/9 family protein | chr4:9601451-9604207 FORWARD LENGTH=2053
Length=2053
Score = 2484 bits (1345), Expect = 0.0
Identities = 1481/1546 (96%), Gaps = 11/1546 (1%)
Strand=Plus/Plus
Query 1 ATGCATCTGAAGAATTCAACTGTAGCAGAACGGCGGTACATCGGAAAAGAAACCGCCGCT 60
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 120 ATGCATCTGAAGAATTCTACTGTAGCAGAACGGCGGTACATCGGAAAAGAAACCGCCGGT 179
Query 61 TTTTTATCTTCTTCCTCCGATTTGGATCCGAAACCTAAGATTAAACATCATCATCGTCCT 120
| |||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct 180 TATTTAACTTCTTCCTCCGATTTGGATCCGAAACCTAAGATT-AA-A-CATCATCGTCCT 236
Query 121 CTTCAGGTACCTGAGATTCTGACTCCAGACATTGGTGCTGGCGCTGGATTCAGTGTGTAT 180
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 237 CTTCAGGTACCTGAGATTTTGACTCCAGACATTGGTGCTGGTGCTGGATTCAGTGTGTAT 296
Query 181 AACAATCAAGTTCAAGCTCAGAGTCG---TCATCTAACGGTTGAAATCCCAGATTCATCG 237
|| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 297 AATAATCAAGTTCAAGCTCAGAGTCGTCATCATCTGACGGTTGAAATCCCAGATTCATCG 356
Query 238 TCTCAGAATCTTACATCGAAGAGACCTGTGGTGGTTCAATCTTCTAATCCGTTCAACGTT 297
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 TCTCACAATCTTACATCTAAGAGACCTGTGGTGGTTCAATCTTCTAATCCGTTCAACGTT 416
Query 298 GACGATTTCAGAAG---ACAACGCGCAAGCTTGGGTTCAATTTCATCTTATTGTCCGTCG 354
||||||||| |||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct 417 GACGATTTCCGAAGACAACAACGCGCAAGCTTGGGTCCGATTTCATCTTATTGTCCGTCG 476
Query 355 TATCTTTTGTCGtttttttCTTCATCTCTTCCATCGATCCCATCGGCGACTAATCAGAAG 414
|||||||| |||| |||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 477 TATCTTTTATCGTGGTTTTCTTCTTCTCTTCCATCGATCCCATCGGCCACTAATCAGAAG 536
Query 415 CTTCTCCGTCATGTTCTTAGAGTCCGTTTGATATGTTTCCATCTTCGTTTCTTACTTCTT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 CTTCTCCGTCATGTTCTTAGAGTCCGTTTGATATGTTTCCATCTTCGTTTCTTACTTCTT 596
Query 475 CTCTCTGTGCCTCCTCTCTATATCTTTTTCTTGTTGATTAGTTTCAGAttcttccttct- 533
|||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 597 CTCTCTGTTCCTCCTCTCTACATCTTCTTCTTGTTGATTAGTTTCAGATTCTTCCTTCTC 656
Query 534 tttcgtcttctcgataatcgctttttcttttgtcctttcgatctctctcAAGTTCGCTCT 593
||| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 657 TTT-GTCTTCTCGATTATCGCTTTTTCTTTCGTCCTTTCGATCTCTCTCAAATTCGCTCT 715
Query 594 TCCTCACTTACCATCAATTCGTTTGATTATCGCTCGATTGCTGTCCCTCAAGCTTAGCCC 653
||||||||||||||| |||||||||||||||||||| || || || |||||||||| |||
Sbjct 716 TCCTCACTTACCATCGATTCGTTTGATTATCGCTCGGTTACTTTCTCTCAAGCTTACCCC 775
Query 654 TACCAGATCCTCGTCGTCGTCTCAAGAGAGCACTAAACATGTTGTTTGGTCAATTGGGTC 713
||||||||| || || || ||||| |||| ||||||||||||| ||||||||||||||||
Sbjct 776 TACCAGATCATCCTCTTCATCTCAGGAGAACACTAAACATGTTATTTGGTCAATTGGGTC 835
Query 714 GAAGCCTGTGACTGAGAAGAAGACCAACTCTGGCTCATGGGTTCAGAAGTACAGCTCTGG 773
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 TAAGCCTGTGACTGAGAAGAAGACCAACTCTGGCTCATGGGTTCAGAAGTACAGCTCTGG 895
Query 774 TGATGTATACGAGGGAGAGTTTCATAGGGGGAAGTGTTCAGGAAGTGGAGTTTATTACTA 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 TGATGTATACGAGGGAGAGTTTCATAGGGGGAAGTGTTCAGGAAGTGGAGTTTATTACTA 955
Query 834 TTCTATGAAGGGTAAATACGAAGGGGATTGGATTGATGGGAAATATGATGGATATGGAGT 893
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 956 TTCTATGAAGGGTAAATACGAAGGGGATTGGATTGATGGGAAGTATGATGGATATGGAGT 1015
Query 894 TGAAACATGGGCTAAAGGAAGTAGGTACCGAGGTCAATACAGGCAAGGGATGAGACATGG 953
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 TGAAACTTGGGCTAAAGGGAGTAGGTACCGAGGTCAATACAGGCAAGGGATGAGACATGG 1075
Query 954 AACTGGTATCTATAGATTTTATACAGGGGATGTATATGCTGGTGAGTGGTCTAATGGACA 1013
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 AACTGGTATCTACAGATTTTATACAGGGGATGTATATGCTGGTGAGTGGTCTAATGGACA 1135
Query 1014 GAGCCATGGCTGTGGTGTGTATACCTCTGAGGATGGTAGTCGTTTTGTTGGAGAGTTTAA 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GAGCCATGGCTGTGGTGTGTATACCTCTGAGGATGGTAGTCGTTTTGTTGGAGAGTTTAA 1195
Query 1074 ATGGGGTGTCAAACATGGCCTTGGTCATTATCATTTCAGAAATGGTGATACATATGCTGG 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 ATGGGGTGTCAAACATGGCCTTGGTCATTATCATTTCAGAAATGGTGATACATATGCTGG 1255
Query 1134 AGAGTATTTTGCAGACAGGATGCATGGTTTTGGAGTGTATCAATTTGGAAACGGGCATCG 1193
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 GGAGTATTTTGCAGACAGGATGCATGGTTTTGGAGTGTATCAATTTGGAAACGGGCATCG 1315
Query 1194 GTATGAAGGAGCCTGGCATGAGGGGAGAAGGCAAGGACTTGGTATGTACACGTTCAGGAA 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 GTATGAAGGAGCCTGGCATGAGGGGAGAAGGCAAGGACTTGGTATGTACACGTTCAGGAA 1375
Query 1254 TGGTGAGACACAGGCAGGCCATTGGGAAGATGGAGTTCTCAGCTGTCCTACCGAGCAGAC 1313
|||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||
Sbjct 1376 TGGTGAGACACAGGCAGGCCATTGGGAAGACGGAGTTCTTAACTGTCCTACCGAGCAGAC 1435
Query 1314 CACTCGTCCTGATTCATCGTTTTCCATCAGCCATTCCAAGGTTCTCGACACTGTCCAGCA 1373
|||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 1436 CACTCGCCCTGATTCATCGTTTTCCATCAGTCATTCCAAGGTTGTCGACACTGTCCAGCA 1495
Query 1374 AGCAAGGAAAGCAGCCGAGAAAGCACGTGAAGTTGTCAAAGTTGAAGAGAGAGTGAACAG 1433
|||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1496 AGCAAGGAAAGCAGCCAAGAAAGCACGCGAAGTTGTGAAAGTTGAAGAGAGAGTGAACAG 1555
Query 1434 AGCAGTGATGGTCGCAAACCGAGCAGCAAATGCTGCTAGAGTTGCTGCTACAAAGGCTGT 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 AGCAGTGATGGTCGCAAACCGAGCAGCAAATGCTGCTAGAGTTGCTGCTACAAAGGCTGT 1615
Query 1494 CCAAACCCAAACATTTCATTGTAGTGGTGGTGATGATCCCTTGTGA 1539
||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1616 CCAAACCCAAACATTTCATTGTAGTAGTGGTGACGATCCCTTGTGA 1661
> AT2G35170.1 | Symbols: | Histone H3 K4-specific methyltransferase
SET7/9 family protein | chr2:14827463-14829802 FORWARD
LENGTH=1804
Length=1804
Score = 965 bits (522), Expect = 0.0
Identities = 931/1123 (83%), Gaps = 50/1123 (4%)
Strand=Plus/Plus
Query 411 GAAGCTTCTCCGTC-ATGTTCTTAGAGTCCGTTTGATATGTTTCCATCTTCGTTTCTTAC 469
||||||||| || | || ||||||| ||||||||| |||||||||||||||||||| |
Sbjct 479 GAAGCTTCTACG-CTATACCCTTAGAGCCCGTTTGATTTGTTTCCATCTTCGTTTCTTGC 537
Query 470 TTCTTCTCTCTGTGCCTCCTCTCTATATCTT-TTTCTTGTTGATTAGT-TTCAGAt-tct 526
|||||||| |||| |||||| | || ||||| || |||||| || | | ||| | | |||
Sbjct 538 TTCTTCTCGCTGTCCCTCCTTTATACATCTTCTTCCTTGTT-ATCAATCTTC-G-TATCT 594
Query 527 tccttcttttcgtc-ttctcgataatcgctttttcttttgtcctttcgatctctctcAAG 585
|||||| | | ||| || | ||| |||||||| || || |||| |||||||||||| ||
Sbjct 595 TCCTTCGTCTAGTCTTTGT-GATTATCGCTTTATCCTTCATCCTCTCGATCTCTCTC-AG 652
Query 586 -TTCGCTCTTCCTCACTTACCATCAATTCGT-TTGATTATCGCTCGATTGCTGTCCCTCA 643
|||||||||||||||||| ||||||||||| || || |||| || |||||| |
Sbjct 653 ATTCGCTCTTCCTCACTTAACATCAATTCGTCTT-TTTGTCGCACGCTTGCTG----AC- 706
Query 644 AGCTTAGCCCTACCAGATCCTCGTCGTCGTCTCAAG-AGAGCACTAAAC-ATGTTGTTTG 701
| ||| |||| |||||| || || || |||| || ||||||| | | | ||||||||
Sbjct 707 A-TTTATCCCTGCCAGAT--TC-TCTTCCTCTC-AGCCGAGCACTGACCGA-GTTGTTTG 760
Query 702 GTCAATTGGGTCGAAGCCTG-TGACTGAG---AAGAAGACCAACTCTGGCTCATGGGTTC 757
||| |||||||||||||| | || | ||| || ||||| || || || || |||||||
Sbjct 761 GTCCATTGGGTCGAAGCCAGTTG-CGGAGAATAATAAGACAAATTCAGGATCTTGGGTTC 819
Query 758 AGAAGTACAGCTCTGGTGATGTATACGAGGGAGAGTTTCATAGGGGGAAGTGTTCAGGAA 817
||||||| || || |||| | || || |||||||||||||| || |||||||||||||
Sbjct 820 AGAAGTATGGCACTAATGATATGTATGAAGGAGAGTTTCATAGAGGAAAGTGTTCAGGAA 879
Query 818 GTGGAGTTTATTACTATTCTATGAAGGGTAAATACGAAGGGGATTGGATTGATGGGAAAT 877
||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||||
Sbjct 880 GTGGAGTTTATTACTATTCTATGAAAGGCAAATACGAAGGAGAGTGGATTGATGGGAAAT 939
Query 878 ATGATGGATATGGAGTTGAAACATGGGCTAAAGGAAGTAGGTACCGAGGTCAATACAGGC 937
||||||| |||||||| ||||||||| ||||||| |||||||| ||||||||||| |||
Sbjct 940 ATGATGGTTATGGAGTAGAAACATGGTCTAAAGGGAGTAGGTATCGAGGTCAATATAGGT 999
Query 938 AAGGGATGAGACATGGAACTGGTA-TCTATA-GATTTTATACAGGGGATGTATATGCTGG 995
||| | |||||||||| ||| | | |||| | ||||||||||| ||||| ||||||||
Sbjct 1000 TAGGTCTAAGACATGGAATTGG-AGTTTATACG-TTTTATACAGGAGATGTGTATGCTGG 1057
Query 996 TGAGTGGTCTAATGGACAGAGCCATGGCTGTGGTGTGTATACCTCTGAGGATGGTAGTCG 1055
||| ||||||||||| ||| ||||||| |||||||| ||||||||||||||||| ||| |
Sbjct 1058 TGAATGGTCTAATGGGCAGTGCCATGGTTGTGGTGTATATACCTCTGAGGATGGAAGTAG 1117
Query 1056 TTTTGTTGGAGAGTTTAAATGGGGTGTCAAACATGGCCTTGGTCA-TTATCATTTCAGAA 1114
| || |||||||| || |||||||||||||||||||||||| | ||| ||||||||||
Sbjct 1118 ATATGACGGAGAGTTCAAGTGGGGTGTCAAACATGGCCTTGGT-AGTTACCATTTCAGAA 1176
Query 1115 ATGGTGATACATATGCTGGAGAGTATTTTGCAGACAGGATGCATGGTTTTGGAGTGTATC 1174
|||||||| | |||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 1177 ATGGTGATGCGTATGCTGGGGAGTATTTTGCAGACAAGATGCATGGTTTTGGAGTGTATC 1236
Query 1175 AATTTG-GAAACGGGCATCGGTATGAAGGAGCCTGGCATGAGGGGAGAAGGCAAGGACTT 1233
| |||| ||| ||||||| |||||||||||| ||||| ||||| ||||||||||| |||
Sbjct 1237 ACTTTGCGAA-CGGGCATAAGTATGAAGGAGCTTGGCACGAGGGAAGAAGGCAAGGGCTT 1295
Query 1234 GGTATGTACACGTTCAGGAATGGTGAGACACAGGCAGGCCATTGGGAAGATGGAGTTCTC 1293
|||||||| || |||||||||||||| ||||| || || ||||||||||| || || |||
Sbjct 1296 GGTATGTATACTTTCAGGAATGGTGATACACAAGCCGGTCATTGGGAAGACGGTGTACTC 1355
Query 1294 AGCTGTCCTACCGAGCAGACCACTC-GTCCTG-ATTCATCGTTTT-CCATCAGCCATTCC 1350
|| ||||||||||||||||| | || |||||| || |||| |||| |||| |||||||||
Sbjct 1356 AGTTGTCCTACCGAGCAGACTA-TCCGTCCTGGAT-CATC-TTTTACCATAAGCCATTCC 1412
Query 1351 AAGGTTCTCGACACTGTCCAGCAAGCAAGGAAAGCAGCCGAGAAAGCACGTGAAGTTGTC 1410
|| ||| | || |||| ||||||||||||||||||| |||||||||| |||||||||
Sbjct 1413 AAAGTTGTTGATGCTGTTGAGCAAGCAAGGAAAGCAGCTGAGAAAGCACATGAAGTTGTG 1472
Query 1411 AAAGTTGAAGAGAG-AGTGAACAGAGCAGTGATGG-TCGCAAACCGAGCAGCAAATGCTG 1468
||||| |||||||| | | || ||||| ||||||| | ||||| ||||||| ||||| |
Sbjct 1473 AAAGTGGAAGAGAGGA-TCAAGAGAGCGGTGATGGCT-GCAAATAGAGCAGCGAATGCAG 1530
Query 1469 CTAGAGTTGCTGCTACAAAGGCTGTCCAAACCCAAACATTTCA 1511
||||||| || || |||||||||||| |||| || |||||
Sbjct 1531 CTAGAGTAGCAGCCGTGAAGGCTGTCCAATCCCAGACCTTTCA 1573
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75953424585
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5