BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg890597 Length=1455 Score E Sequences producing significant alignments: (Bits) Value AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 1548 0.0 > AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9287862-9289582 REVERSE LENGTH=1547 Length=1547 Score = 1548 bits (838), Expect = 0.0 Identities = 943/994 (95%), Gaps = 6/994 (1%) Strand=Plus/Plus Query 465 AGATTTGATCCCGTGGAATGCGATGATATCTGGGTATGTGCAAAAGGGTCTT-GAACAAG 523 ||||||||| ||||||||||| ||||||||||||||||||||||| ||| || || |||| Sbjct 557 AGATTTGATACCGTGGAATGCAATGATATCTGGGTATGTGCAAAAAGGT-TTAGAGCAAG 615 Query 524 ATGGGCTTTATATTTATTATGATATGAGACAGAACGGAATAGTTCCTGATCAGTATACTT 583 | ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 616 AAGGGCTTTTTATTTATTATGATATGAGACAGAACAGAATAGTTCCTGATCAGTATACAT 675 Query 584 TTGCTTCAGTGTTTAGAGTTTGTTCTGCGTTAGCATC-GTTGGAACACGGTAAGAGAGCT 642 |||||||||||||||||| |||||||||||||| ||| ||||||||| || ||||||||| Sbjct 676 TTGCTTCAGTGTTTAGAGCTTGTTCTGCGTTAG-ATCGGTTGGAACATGGAAAGAGAGCT 734 Query 643 CACGCTGTGATGATAAAGAGACATATTAAGTCGAACATTATAGTTGATAGTGCCCTTGTT 702 |||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct 735 CACGCTGTGATGATAAAGCGGTGTATTAAGTCGAACATTATAGTTGATAGTGCTCTTGTT 794 Query 703 GATATGTACTTTAAATGCAGCAGCTTCTCTGATGGCCACAAAGTATTTGATCAATTGTCC 762 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 795 GATATGTACTTTAAATGCAGTAGCTTCTCTGATGGCCACAGAGTATTTGATCAATTGTCC 854 Query 763 ACTAGAAACGTTG-TTACGTGGACCTCATTGATGTCTGGCTATGGATATCATGGAAAAGT 821 |||||||| | || ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 855 ACTAGAAATG-TGATTACGTGGACCTCATTGATATCTGGCTATGGATATCATGGAAAAGT 913 Query 822 TTCAGAGGTGTTAAAATGCTTTGAGAAGATGAAGGAAGAAGGTTGTAGACCAAATCCGGT 881 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 914 TTCAGAGGTGTTAAAATGCTTTGAAAAGATGAAGGAAGAAGGTTGTAGACCAAATCCGGT 973 Query 882 TACATTTTTGGTGGTTCTCACTGCGTGTAACCATGGAGGTTTAGTTGATAAAGGTTGGGA 941 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 974 TACTTTTTTGGTGGTTCTCACTGCGTGTAACCATGGAGGTTTAGTTGATAAAGGTTGGGA 1033 Query 942 GCATTTCAATTCTATGAAGAGAGATTACGGGATTGAACCTGAGGGACAACACTATGCAGC 1001 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1034 GCATTTCTATTCTATGAAGAGAGATTACGGGATTGAACCTGAGGGACAACACTATGCTGC 1093 Query 1002 TATGGTTGATACGTTAGGGCGTGCTGGTAGGCTACAAGAAGCGTACGAATTTGTAATGAA 1061 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 1094 TATGGTTGATACGTTAGGGCGTGCTGGTAGGTTACAAGAAGCGTATGAATTTGTAATGAA 1153 Query 1062 GTCACCATGCAAGGAGCATGCTCCGGTATGGGGTTCTTTACTTGGGGCTTGCAGGATTCA 1121 ||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||| Sbjct 1154 GTCACCATGCAAGGAGCATCCCCCAGTATGGGGTTCTTTACTTGGGGCTTGCAGGATTCA 1213 Query 1122 TGGGAATGTGAAACTGCTAGAACTCGCAGCTACAAAATTTTTGGAGTTGGATCCAACGAA 1181 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 1214 TGGGAATGTGAAACTGCTAGAACTCGCAGCTACAAAATTTTTAGAGTTGGATCCAACAAA 1273 Query 1182 TGGGGGGAATTACGTGGTGTTTGCCAATGGATACGCGAGTTGTGGATTCCGTGATGCTGC 1241 ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1274 TGGAGGGAATTACGTTGTGTTTGCCAATGGATACGCGAGTTGTGGATTACGTGAAGCTGC 1333 Query 1242 TTCAAAGGTTAGGAGGAGGATGGAGAACGCAGGAGTTAAAAAAGATCCCGGGTATAGCCA 1301 |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||| Sbjct 1334 CTCAAAGGTTAGGAGGAAGATGGAGAATGCAGGAGTGAAAAAAGATCCCGGGTATAGCCA 1393 Query 1302 GATCGAATTACAAGGGGAAGTTCATAGATTCATGAAGGATGATACGTCTCACAGACTCTC 1361 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1394 GATAGAATTACAAGGGGAAGTTCATAGATTCATGAAGGATGATACGTCTCACAGACTCTC 1453 Query 1362 AGTAAAGATATACAAGAAGGTCCACGAGATGACTTCATTCTTTATGGATATTGACTACTA 1421 | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1454 TGAAAAGATATACAAGAAGGTCCATGAGATGACTTCATTCTTTATGGATATTGACTACTA 1513 Query 1422 TCCAGATGACTTAGACTCTTGCTGTCCTGTTTGA 1455 |||||||| |||||||||| |||||||||||||| Sbjct 1514 TCCAGATGGCTTAGACTCTAGCTGTCCTGTTTGA 1547 Score = 560 bits (303), Expect = 1e-158 Identities = 414/468 (88%), Gaps = 6/468 (1%) Strand=Plus/Plus Query 1 ATGAAAACGTTAATATCTTCTTCTCTGTCTCACAAATCCCACTCTCAGATC-CTCTGCTT 59 |||||||||||||| ||||||||||| |||||||||||||| | | || | | ||||| Sbjct 42 ATGAAAACGTTAATCTCTTCTTCTCTTTCTCACAAATCCCAATGTTTGA-CTATTTGCTT 100 Query 60 CTCTCTGAATAAACTTGCCATGATTTACTCTCA-GAAGTTGTTACAAACAGAGGCCTCTC 118 | |||||||| ||||| ||| |||||| || | ||| ||||||||||| |||| Sbjct 101 CAAGCTGAATAAGCTTGCAATGGTTTACT-ACACTCGGGAGTTCCAAACAGAGGCGTCTC 159 Query 119 AGTCGTCGGCTTCCGGTCCTATGTTTTCCGGCAATGCGACGGCGATCCTACGCCGGATGC 178 || |||||||||||||| ||||||| ||||| ||||||||| |||||||||||||||||| Sbjct 160 AGACGTCGGCTTCCGGTTCTATGTTCTCCGGAAATGCGACGACGATCCTACGCCGGATGC 219 Query 179 TAGCGGAGAGGAGAATTGGCAGCTTTCAGGTGGAGAATCAGA-GAAAGAAAGAGAAGTTA 237 | || |||| ||||||||| || ||||||||||||||||||| |||| | ||||||| || Sbjct 220 TTGCAGAGAAGAGAATTGGAAGGTTTCAGGTGGAGAATCAGAGGAAA-ACAGAGAAGCTA 278 Query 238 GATAAGACATTAAAGGGTCTGTGTGTCACTGGGAGATTGAAAGAAGCTGTTGGGTTGTTA 297 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 279 GATAAGACATTAAAGGGTCTATGTGTTACAGGGAGATTGAAAGAAGCTGTTGGGTTGTTA 338 Query 298 TGGCGTAGCGGGTTGCAAGTCGAGCCTGAGACTTATGCTGTGCTGTTGCAGGAATGTAAA 357 ||| ||||||| |||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 339 TGGAGTAGCGGATTGCAAGTAGAGCCTGAGACTTATGCTGTACTGTTGCAGGAATGTAAA 398 Query 358 CAAAGGAAGGAATATACAAAAGGGAAACGGATTCATGCTCAGATGATTGTTGTAGGATAT 417 ||||||||||| ||||||||||||||||| || |||||||||||| ||||||| |||| | Sbjct 399 CAAAGGAAGGAGTATACAAAAGGGAAACGTATACATGCTCAGATGTTTGTTGTTGGATTT 458 Query 418 GCTCCCAATGAGTATTTGAAAGTTAAGTTGTTGATACTTTACGCCTTA 465 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 459 GCTCTCAATGAGTATTTGAAAGTTAAGTTGTTGATACTTTACGCCTTA 506 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71736578805 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5