BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg890667 Length=2142 Score E Sequences producing significant alignments: (Bits) Value AT4G15980.1 | Symbols: | Plant invertase/pectin methylesterase... 1775 0.0 > AT4G15980.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr4:9057466-9059983 REVERSE LENGTH=2106 Length=2106 Score = 1775 bits (961), Expect = 0.0 Identities = 1175/1275 (92%), Gaps = 27/1275 (2%) Strand=Plus/Plus Query 889 TCTTCCGAGAATCAACCACTAGATTCTTCCG-ATAAACTTCCTCAAAAATCGAC-TTCTT 946 |||||| ||||||||| | | || ||||||| | | || |||| |||||||| | || || Sbjct 838 TCTTCCAAGAATCAACAAATGGAATCTTCCGAAGATAC-TCCTAAAAAATCGGCATT-TT 895 Query 947 CTGAGAATCAGCCATT-G--GATTCTTTAGAGAGTAA--TCCTCAAAAATCAACTTCTAC 1001 | | |||||| ||||| | || |||| || | || |||||||||||| |||||| | Sbjct 896 CAGGGAATCAACCATTAGACGACTCTTCCGATA--AACTTCCTCAAAAATCGACTTCTTC 953 Query 1002 CGAGAATCGACCGTTGGA-TCCT------A-----CTCAAAATTCGGA-TTCT-TCCATT 1047 ||||| | ||||||||| |||| | ||||||| || | |||| | | Sbjct 954 TGAGAACCAACCGTTGGATTCCTCCGAGAACCCTCCTCAAAAATC-AACTTCTAGCGA-G 1011 Query 1048 ATTCGACCATTGGATCCTCTTAGAAAATTAAATCCCCTTAATAAATTGGATTCTTCAAAG 1107 | |||||| |||||||||||| | ||||| ||||||||||||||||||||||||| ||| Sbjct 1012 AATCGACCGTTGGATCCTCTTCGCAAATTGAATCCCCTTAATAAATTGGATTCTTTGAAG 1071 Query 1108 GATCGACACTTATCGGAGGAAGGAGAGTTCCCACCATGGGTAACACGGCATTCGCGAAGG 1167 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| Sbjct 1072 GATCGACACTTATCGGAGGAAGGAGAGTTCCCGCCATGGGTAACACCGCATTCGCGGAGG 1131 Query 1168 CTTCTTGCACGTGGACCTAGAAATAATGGAATCAGAGCGGACGTTGTGGTTGCAAAAGAC 1227 |||||||||||| ||||||||||||||||||||| |||| | |||||||||||||| ||| Sbjct 1132 CTTCTTGCACGTAGACCTAGAAATAATGGAATCAAAGCGAATGTTGTGGTTGCAAAGGAC 1191 Query 1228 GGGAGTGGTAAGTGCAAGACTATCGCACAAGCATTGGCAATGGTACCAATGAAGAACACA 1287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 GGGAGTGGTAAGTGCAAGACTATCGCACAAGCATTGGCAATGGTACCAATGAAGAACACA 1251 Query 1288 AAAAAGTTTGTAATTCACATAAAGCAAGGTGTTTACAAGGAGAAAGTAGAGGTAACCaaa 1347 || |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1252 AAGAAGTTTGTGATTCACATAAAGGAAGGTGTTTACAAGGAGAAAGTAGAGGTAACCAAA 1311 Query 1348 aaaaTGCTTCACGTCATGTTCGTTGGAGACGGACCAACAAAGACGATTATCACTGGAGAC 1407 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1312 AAAATGCTACACGTCATGTTCGTTGGAGACGGACCAACAAAGACGGTTATCACTGGAGAC 1371 Query 1408 ATTGCCTTCTTACCAAACCAAGTCGGCACCTACCGCACTGCCTCCGTTGCGGTGAATGGG 1467 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1372 ATTGCCTTCTTACCAGACCAAGTCGGCACCTACCGCACCGCCTCCGTTGCGGTGAATGGG 1431 Query 1468 GACTATTTCATGGCAAAGGACATAGGGTTCGAGAATACGGCAGGAGCGGCACGCCATCAA 1527 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct 1432 GACTATTTCATGGCAAAGGATATAGGGTTCGAGAACACGGCAGGAGCTGCACGCCATCAA 1491 Query 1528 GCAGTCGCACTACGAGTTTCAGCCGATTTTGCTGTGTTCTTCAACTGTCATATGAATGGT 1587 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1492 GCAGTCGCACTCCGAGTTTCAGCCGACTTTGCTGTGTTCTTCAACTGTCATATGAATGGT 1551 Query 1588 TACCAAGACACGCTTTACGTCCACACTCATCGTCAATTCTACCGTAACTGCCGCGTCTCA 1647 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1552 TACCAAGACACGCTTTACGTCCATACTCATCGTCAATTCTACCGTAACTGCCGTGTCTCA 1611 Query 1648 GGCACCATTGATTTCGTCTTCGGTGATGCCAAGGCCGTTTTTCAGAACTGCGAATTCGTT 1707 ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1612 GGCACGATCGATTTCGTCTTCGGTGACGCCAAGGCCGTTTTTCAGAACTGCGAATTCGTT 1671 Query 1708 ATCCGCCGTCCCATGGAACACCAACAGTGCATAGTCACAGCACAAGGACGAAAAGACCGG 1767 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1672 ATCCGCCGTCCCATGGAACACCAACAGTGCATCGTCACAGCACAAGGACGAAAAGACCGG 1731 Query 1768 CGTGAGACGACTGGGATTGTTATCCACAATAGCCGTATAACCGGTGATGCATCATATCTT 1827 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1732 CGTGAGACAACTGGGATTGTTATCCACAATAGCCGTATAACCGGTGATGCATCATATCTT 1791 Query 1828 CCCGTGAAAGCCAAGAACAGAGCATTTTTGGGACGGCCATGGAAAGAGTTTTCGAGGACA 1887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1792 CCCGTGAAAGCCAAGAACAGAGCATTTTTGGGACGGCCATGGAAAGAGTTTTCGAGGACA 1851 Query 1888 ATCATAATGAATACAGAGATTGATGATGTGATAGACCCAGAGGGTTGGTTGAAGTGGAAC 1947 || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 1852 ATTATAATGAACACAGAGATTGATGATGTGATAGACCCGGAAGGTTGGTTGAAGTGGAAC 1911 Query 1948 GAGACGTTCGCGCTCAACACGTTGTTCTACACTGAGTACCGCAACAGAGGTCGTGGTTCG 2007 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1912 GAGACGTTTGCGCTCAACACGTTGTTCTACACTGAGTACCGCAACAGAGGTCGTGGTTCG 1971 Query 2008 GGTCAGGGTCGTCGGGTTAGGTGGAGAGGTATCAAGCGGATCTCTGATAGAGTCGCAAGG 2067 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1972 GGTCAGGGTCGTCGGGTTAGGTGGAGAGGTATCAAGCGGATCTCTGATAGAGCCGCAAGG 2031 Query 2068 GAGTTTGCTCCCGGGAATTTCCTACGTGGCAACACGTGGATACCACAGACGCGTATACCT 2127 ||||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||| || Sbjct 2032 GAGTTTGCTCCCGGGAATTTCTTACGTGGCAACACATGGATCCCACAAACGCGTATTCCA 2091 Query 2128 TATAATGCTAACTGA 2142 || |||||||||||| Sbjct 2092 TACAATGCTAACTGA 2106 Score = 1386 bits (750), Expect = 0.0 Identities = 939/1031 (91%), Gaps = 10/1031 (1%) Strand=Plus/Plus Query 1 ATGAAGAAATATGTCTTGTTAGGCCTCACGGCTCTCCTTATGGCAATGGTCATTTGTGTA 60 ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 1 ATGAATAAATATGTCTTGTTAGGCGTCACGGCTCTCATTATGGCAATGGTCATTTGTGTA 60 Query 61 GAGGCCAACGATGGCAGCAGCCCGAGTAGAAAAATGGAAGAGATTCACCGTGAAAGCAAG 120 |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| Sbjct 61 GAGGCCAACGATGGCAACAGCCCGAGTAGGAAAATGGAAGAGGTTCACCGTGAAAGCAAG 120 Query 121 CTGATGATAACAAAGACGGCGGTGACTATTATATGTTCCTCCACCGATTACAAACAAGAT 180 |||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| Sbjct 121 CTGATGATAACAAAGACGACGGTGAGTATTATATGTGCCTCCACCGATTACAAACAAGAT 180 Query 181 TGCACCACGAGTCTCGCAACCGTGAGGTCGCCGGATCCCCGAAATCTAATAAGATCTGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TGCACCACGAGTCTCGCAACCGTGAGGTCGCCGGATCCCCGAAATCTAATAAGATCTGCT 240 Query 241 TTCGATCTCGCTATCGTCTCAATTAGAAGTGGAATTGACAGGGGGATGATTGATCTAAAA 300 || || || |||||| |||| ||| |||||||||| ||||| ||||||||||||||||| Sbjct 241 TTTGACCTTGCTATCATCTCGATTCGAAGTGGAATCGACAGAGGGATGATTGATCTAAAG 300 Query 301 AGTAGAGCGGATGCGGATGTGCACACAAG-GAACGCGCTGAATACTTGTCGAGAGCTTAT 359 |||||||| ||||| ||| |||||||||| ||| ||||| ||||||||| |||||||||| Sbjct 301 AGTAGAGCAGATGCCGATATGCACACAAGAGAA-GCGCTTAATACTTGTAGAGAGCTTAT 359 Query 360 GGATGATGCAATTGATGATCTTCGAAAAACGAGAGATAAATTTAGGGGATTTTTGTTCAC 419 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 360 GGATGATGCGATTGATGATCTTCGAAAAACGAGGGATAAATTTAGGGGATTTTTGTTCAC 419 Query 420 AAGATTGTCAGACTTTGTTGAGGATCTTTGTGTGTGGCTCAGTGGATCAATCACATACCA 479 |||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct 420 TAGATTGTCAGACTTCGTTGAGGATCTTTGTGTGTGGCTTAGCGGATCAATCACATACCA 479 Query 480 ACAGACGTGCATCGATGGATTTGAAGGGATAGATAGCGAAGCGGCCATGATGATGGAGAG 539 |||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||||| Sbjct 480 ACAGACGTGCATTGATGGATTTGAAGGGATTGATAGTGAAGCGGCCGTGATGATGGAGAG 539 Query 540 AGTCATGAGGAAGGGGCAGCGTCTCACTAGCAATGGATTAGCGATTGCCGCAAATCTCGA 599 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 540 AGTCATGAGGAAGGGGCAGCATCTCACTAGCAATGGATTGGCGATTGCCGCAAATCTCGA 599 Query 600 TAAGTTATTGAAGGCTTTTCGTATTCCATTTCCATTTCTCAGGTCAAGAAGAGACAGACT 659 ||| |||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| Sbjct 600 TAAATTATTGAAGGCTTTCCGTATTCCATTTCCATTTCTTAGGTCAAGAAGAGGCAGACT 659 Query 660 CGGCATTTTAGGTTCAGGTTCTTCACGAGACCAATCTGTGGGTTCTTCCCAAGATCCCCC 719 ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |||| Sbjct 660 CGGCATTTTAGGTTCGGGTTCTTCACGAGACGAATCGGTGGGTTCTTCCCAAGATTCCCC 719 Query 720 TCCAAATGTGGATTCTTCTGATAATTCTCCTAAAACAATGGAGTCCTCGGAGAATCGACC 779 |||||||| |||||||||||| ||||||||| ||| |||| || |||||||||| ||| Sbjct 720 TCCAAATGAAGATTCTTCTGATGATTCTCCTAGCACAGTGGACTCTTCGGAGAATCAACC 779 Query 780 ATTGGATTC--C-TCAGAGAATCGGCCGTCGGATTCTTCAAATAATAGACCGTTGGATTC 836 | ||||||| | ||||| |||| | ||||||| ||||||||||||||||| || ||||| Sbjct 780 AGTGGATTCTTCATCAGAAAATCAGTCGTCGGACTCTTCAAATAATAGACCATTAGATTC 839 Query 837 TTCCGAGAATCGACCAAA-GGAATCTTCCGAAAATTCTCCTCAAAAATTGACATCTTCCG 895 |||| |||||| || ||| ||||||||||||| || ||||| |||||| | ||| ||| | Sbjct 840 TTCCAAGAATCAAC-AAATGGAATCTTCCGAAGATACTCCTAAAAAATCGGCATTTTCAG 898 Query 896 AGAATCAACCACTAGAT---TCTTCCGATAAACTTCCTCAAAAATCGACTTCTTCTGAGA 952 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 899 GGAATCAACCATTAGACGACTCTTCCGATAAACTTCCTCAAAAATCGACTTCTTCTGAGA 958 Query 953 ATCAGCCATTGGATTCTTTAGAGAGTAATCCTCAAAAATCAACTTCTACCGAGAATCGAC 1012 | || || |||||||| | |||| |||||||||||||||||||| ||||||||||| Sbjct 959 ACCAACCGTTGGATTCCTCCGAGAACCCTCCTCAAAAATCAACTTCTAGCGAGAATCGAC 1018 Query 1013 CGTTGGATCCT 1023 ||||||||||| Sbjct 1019 CGTTGGATCCT 1029 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 106224353220 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5