BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg890707 Length=324 Score E Sequences producing significant alignments: (Bits) Value AT4G15735.1 | Symbols: SCRL10 | SCR-like 10 | chr4:8963041-8963... 505 1e-142 AT2G05117.1 | Symbols: SCRL9 | SCR-like 9 | chr2:1838592-183901... 113 9e-25 > AT4G15735.1 | Symbols: SCRL10 | SCR-like 10 | chr4:8963041-8963583 FORWARD LENGTH=436 Length=436 Score = 505 bits (273), Expect = 1e-142 Identities = 308/325 (95%), Gaps = 2/325 (1%) Strand=Plus/Plus Query 1 ATGAAGGTTGCGGCAATCTTTTTGGCTTCTTGTGTCCTTTTCTCTCTTATCCCCACCCAC 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45 ATGAAGGTTGTGGCAATCTTTTTGGCTTCTTGTGTCCTTTTCTCTCTTATCCCCACCCAC 104 Query 61 TTATCACATGAAGAACCAACGGTTGCACCAACAGAAGAACTAATGTTTGCACCAATG-AA 119 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | || Sbjct 105 TTATCACATGAAGAACCAAAGGTTGCACCAACAGAAGAACTAATGTTTGCACCAA-GCAA 163 Query 120 GGAACCAAAGTACTGTCGTTCGAGACAAGTGTTTGATGGATCATGCACAGACAGAGGCAG 179 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 164 TCAACCAAGGTACTGTCGTTCGAGACAAGTGTTTGATGGATCATGCACAGACAGAGGCAC 223 Query 180 TCCACGCATGACTTGTTTCCTTGATTTCTTGGGTGCACGAAGTGCAAGTGAGATGCCTAA 239 |||||||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct 224 TCCACGCACGACTTGTTTCCTTGACTTCTTAGGTGCGCGAAGTGCAAGTGAGATGCCTAA 283 Query 240 GAACTGCAATTGTACTCCTCAGCCCAATAACAAGCGTCTTTGTGAATGTTCAGTTATTTG 299 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 284 GAACTGCGATTGTACCCCTCAGCCCAATAACAAGCGTCTTTGTGAATGTTCAGTTATTTG 343 Query 300 CACCGATTGTTGTATACATAATTAA 324 ||||||||||||| || | |||||| Sbjct 344 CACCGATTGTTGTGTAAAAAATTAA 368 > AT2G05117.1 | Symbols: SCRL9 | SCR-like 9 | chr2:1838592-1839014 REVERSE LENGTH=273 Length=273 Score = 113 bits (61), Expect = 9e-25 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 1 ATGAAGGTTGCGGCAATCTTTTTGGCTTCTTGTGTCCTTTTCTCTCTTATCCCCACCCAC 60 |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1 ATGAAGGTTGAAGTAATCTTTTTGGCTTCTTGTGTCCTTTTCTCTCTTATCCATGCCCAC 60 Query 61 TTATCACATGAAGAACCAA 79 ||||||||||||||||||| Sbjct 61 TTATCACATGAAGAACCAA 79 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15080324700 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5