BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890779
Length=3450
Score E
Sequences producing significant alignments: (Bits) Value
AT4G15230.1 | Symbols: ATPDR2, PDR2 | pleiotropic drug resistan... 1640 0.0
AT4G15215.1 | Symbols: PDR13, ATPDR13 | pleiotropic drug resist... 1498 0.0
AT4G15236.1 | Symbols: | ABC-2 and Plant PDR ABC-type transpor... 510 3e-143
AT4G15233.2 | Symbols: | ABC-2 and Plant PDR ABC-type transpor... 429 9e-119
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family pro... 198 3e-49
> AT4G15230.1 | Symbols: ATPDR2, PDR2 | pleiotropic drug resistance
2 | chr4:8680182-8686880 FORWARD LENGTH=4316
Length=4316
Score = 1640 bits (888), Expect = 0.0
Identities = 1018/1082 (94%), Gaps = 4/1082 (0%)
Strand=Plus/Plus
Query 1072 TTAGTTTTTAATGCGTTAGTCACAATGACCGTTTTTCTACAAGCTGGTGCTACGACGGAT 1131
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1668 TTAGTTTTTAATGCGTTAGTCACAATGACCGTTTTTCTACAAGTTGGTGCGACGACGGAT 1727
Query 1132 TCTCCACATGGGAATTATCTTATGGGTTCTCTATTCACTGCTCTCTTTAGACTTCTTGCT 1191
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1728 TCTCTTCATGGGAATTATCTGATGGGTTCTCTATTCACTGCTCTCTTTAGACTTCTTGCC 1787
Query 1192 GATGGGCTTCCAGAACTCACT-TTGACTATCTCTAGA-TTGGGAGTGTTCTGCAAACATA 1249
||||||||||||||||||||| || |||||||| ||| || || |||||||||||||| |
Sbjct 1788 GATGGGCTTCCAGAACTCACTCTT-ACTATCTCCAGACTT-GGTGTGTTCTGCAAACAGA 1845
Query 1250 AAGATTTATACTTCTATCCTGCTTGGGCATATGCAATTCCTTCAATTATCTTAAAGATAC 1309
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1846 AAGATTTGTACTTCTATCCTGCTTGGGCATATGCGATTCCTTCAATTATCTTAAAGATAC 1905
Query 1310 CTCTTTCGGTTCTCGATTCATTCATCTGGACATTACTGACATATTATGTCATTGGTTACA 1369
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1906 CTCTATCGGTTCTCGATTCATTCATCTGGACATTACTGACATATTATGTCATTGGTTACA 1965
Query 1370 GCCCCGAGGTCAAAAGGTTCTTCCTGCACTTCCTTATCTTATCTACATTCAACCTTTCAT 1429
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1966 GCCCCGAGGTCAAAAGGTTCTTCCTGCAGTTCCTTATCTTATCTACATTCAACCTTTCTT 2025
Query 1430 GTGTATTAATGTTTCGCGCTATAGCGGCAATATTTCACACAATTGTTGCTTCCACAATCA 1489
|||||| ||||||||||||||| |||||||| |||| ||||||| |||||||||||||||
Sbjct 2026 GTGTATCAATGTTTCGCGCTATTGCGGCAATCTTTCGCACAATTATTGCTTCCACAATCA 2085
Query 1490 CTGGAGCTATTTCCATATTGGTTCTCTCATTATTCGGCGGCTTCATTATTCCAAAATCAT 1549
|||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||
Sbjct 2086 CTGGAGCTATTTCCATATTGGTTCTCTCATTATTTGGTGGCTTCGTTATTCCAAAATCAT 2145
Query 1550 CAATGCCTGCTTGGCTGGGATGGGGATTCTGGCTTTCTCCCTTGTCATATGCTGAGATTG 1609
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2146 CAATGCCTGCTTGGCTGGGATGGGGATTCTGGCTTTCTCCCTTGTCATATGCCGAGATTG 2205
Query 1610 GTCTAAGCGCAAATGAATTTTTCTCCCCACGGTGGAGCAAGTTAATCTCTGGCAACACTA 1669
|||||| |||||||||||||||||| ||||| ||||||||| |||||||| |||| ||||
Sbjct 2206 GTCTAACCGCAAATGAATTTTTCTCTCCACGATGGAGCAAGGTAATCTCTAGCAAGACTA 2265
Query 1670 CGGCCGGGGAACAAATGTTAGATATCCGTGGGTTGAATTTCGGTAGGCACTCTTACTGGA 1729
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2266 CGGCTGGGGAACAAATGTTAGATATTCGTGGGTTGAATTTCGGTAGGCACTCTTACTGGA 2325
Query 1730 CAGCTTTTGGTGCTTTAGTCGGGTTTGTCTTGTTCTTCAATGCACTCTATGTGTTGGCCC 1789
|||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||
Sbjct 2326 CAGCTTTTGGTGCTTTAGTCGGCTTTGTCTTGTTTTTCAATGCCCTCTACGTGTTGGCCC 2385
Query 1790 TAACGTATCAGAATAATCCGAAAAGATCCCGTGCTATGGTCTCGCATGGGAAGTACTCTC 1849
||||||||||||||||||| |||||||||||||||| |||| |||| ||||||||||
Sbjct 2386 TAACGTATCAGAATAATCCCCAAAGATCCCGTGCTATCATCTCACATGAAAAGTACTCTC 2445
Query 1850 AGCGCATAGAAGAAGATTTTAAACCCTGCCCTGAAATCACTTCCCGAGCTAAAACAGGAA 1909
|| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 2446 GGCCCATAGAAGAAGATTTTAAACCCTGCCCTAAAATCACTTCTCGAGCTAAAACAGGAA 2505
Query 1910 AAGTTATCTTGCCTTTTAAGCCCCTCACTGTCACATTTCAAAACGTGCAGTATTATATTG 1969
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2506 AAATTATCTTGCCTTTTAAGCCACTCACTGTCACATTTCAAAACGTGCAGTATTATATTG 2565
Query 1970 AGACTCCTCAGGGAAAGACGTGGCAACTTCTCTCTGATGTTACAGGCGCGTTGAAGCCCG 2029
| |||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||
Sbjct 2566 AAACTCCTCAGGGAAAGACGCGACAACTTCTCTCTGATATAACAGGCGCGTTGAAGCCCG 2625
Query 2030 GTGTTCTCACATCTCTAATGGGTGTCAGTGGAGCAGGGAAAACGACTCTTCTTGATGTTC 2089
| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2626 GAGTTCTCACATCTCTGATGGGTGTCAGTGGAGCAGGGAAAACGACTCTTCTTGATGTCC 2685
Query 2090 TTTCTGGAAGGAAAACCCGGGGTATCATCAAAGGAGAGATCAAAGTAGGCGGGTATCCTA 2149
|||| ||||| ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2686 TTTCGGGAAGAAAAACTCGCGGTATCATCAAAGGAGAGATCAAAGTAGGCGGGTATCCTA 2745
Query 2150 AG 2151
||
Sbjct 2746 AG 2747
Score = 1105 bits (598), Expect = 0.0
Identities = 663/695 (95%), Gaps = 2/695 (0%)
Strand=Plus/Plus
Query 2757 AAATAATCAGCAAGATCTTATCAGCATATTTGGTTCCATGTACACTCTAGTAATCTTCCC 2816
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 3623 AAATAATCAGCAAGATCTTATCAGCATATTTGGATCCATGTACACTCTAGTAGTCTTCCC 3682
Query 2817 GGGAATGAACAACTGTGGGGCAGTGATAAACTTCGTTGCAGCGGAACGCAATGTTTTCTA 2876
||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||
Sbjct 3683 GGGAATGAACAACTGTGCGGCAGTGATAAACTTCATTGCAGCCGAACGCAATGTTTTCTA 3742
Query 2877 CCGTGAAAGGTTTGCACGGATGTACTCCTCATGGGCGTATTCATTTTCTCAGGTCCTAGT 2936
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3743 CCGTGAAAGGTTTGCACGGATGTACTCCTCATGGGCGTATTCATTTTCTCAGGTCCTAAT 3802
Query 2937 TGAGGTTCCATACTCACTACTCCAGTCCGTTCTATGTACAATAATCGTATATCCTATGAT 2996
|||||||||||||||||||||||||||| | |||||||| ||||| |||||||||| |||
Sbjct 3803 TGAGGTTCCATACTCACTACTCCAGTCCCTACTATGTACGATAATTGTATATCCTACGAT 3862
Query 2997 CGGCTACCATATGTCAGTTTACAAGATGTTTTGGAGCTTGTACAGCATCTTCTGCTCGTT 3056
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3863 CGGCTACCATATGTCCGTTTACAAGATGTTTTGGAGCTTGTACAGCATCTTCTGCTCGTT 3922
Query 3057 GCTCATCTTCAACTACTGCGGGATGCTTATGGTTGCTTTGACGCCAAACGTTCACATGGC 3116
||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||
Sbjct 3923 ACTCATCTTCAACTACAGTGGGATGCTTATGGTTGCTTTGACGCCAAACATTCACATGGC 3982
Query 3117 AGTGACTCTACGCTCGTCTTTTTTCTCCATGTTAAATCTGTTTGCTGGCTTTGTCATTCC 3176
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3983 AGTGACTCTACGCTCATCTTTTTTCTCCATGTTAAATCTGTTTGCTGGCTTTGTCATTCC 4042
Query 3177 AAAGCAGAAAATCCCAAAATGGTGGATATGGATGTACTACCTGAGCCCGACATCATGGGT 3236
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4043 AAAACAGAAAATCCCAAAATGGTGGATATGGATGTACTACCTGAGCCCGACATCATGGGT 4102
Query 3237 GTTGGAAGGATTATTGAGTTCGCAATATGGAGATGTCGACAAAGAGATAACAGTATTTGG 3296
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4103 GTTGGAAGGATTACTGAGTTCGCAATATGGAGATGTCGACAAAGAGATATTAGTATTTGG 4162
Query 3297 AGAGAAGAAGAGAGTTTCAGCTTTCTTGGAAGATTACTTTGGTTACAAACATGACTCATT 3356
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 4163 AGAGAAGAAGAGAGTTTCAGCTTTCTTGGAGGATTACTTTGGTTACAAACATGAATCATT 4222
Query 3357 GGTTATAGTAGCGTTTGTTCTCATCGCTTATCCCATTATCGTGGCAACTCTATTTGCCTT 3416
|| | | || ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 4223 GGCTGTTGTGGCGTTTGTTCTCATCGCTTATCCCATTATCGTGGCAACTCTTTTTGCCTT 4282
Query 3417 CTTCATGA-CTAAACTGAATTTCCAAAAGAAATAG 3450
|||||||| | ||||| | ||||||||||||||||
Sbjct 4283 CTTCATGAGC-AAACTCAGTTTCCAAAAGAAATAG 4316
Score = 985 bits (533), Expect = 0.0
Identities = 592/621 (95%), Gaps = 2/621 (0%)
Strand=Plus/Plus
Query 1 ATGAAGGCAATATCTGTTGAAGGTTTGAAAAACAATTTGCAAACTGACTATATCCTAAAG 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 933 ATGAAGGCAACATCTGTTGAAGGTTTGAAAAACAATTTGCAAACTGACTATATCCTAAAG 992
Query 61 ATCCTAGGACTCGATATCTGTGCAGATACACGAGTTGGAGATGCCACGAGACCTGGAATA 120
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 993 ATCCTGGGACTCGATATCTGTGCAGATACAAGAGTTGGAGATGCCACGAGACCTGGAATA 1052
Query 121 TCTGGTGGCCAAAAGAGGAGGTTGACAACAGGGGAACTCGTTGTGGGTCCAGCTACTACC 180
||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1053 TCTGGTGGCGAGAAGAGGAGGTTGACAACAGGGGAACTCGTTGTGGGTCCAGCTACCACC 1112
Query 181 TTGTTCATGGATGAAATATCGAATGGTTTAGACAGCTCAACTACGTTCCAGATAGTGTCA 240
| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1113 CTCTTTATGGATGAAATATCCAATGGTTTAGACAGCTCAACTACGTTCCAAATAGTGTCA 1172
Query 241 TGTCTCCAACAGATGGCACATATAGCTGAAGCCACCATACTGATTTCACTTCTTCAGCCT 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 TGTCTCCAACAGTTGGCACATATAGCTGAAGCCACCATACTGATTTCACTTCTTCAGCCT 1232
Query 301 GCGCCAGAAACGTTTGAGCTTTTCGACGATGTGATTCTTATGGGGGAAGGAAAGATAATT 360
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1233 GCACCAGAAACGTTTGAGCTTTTTGACGATGTGATTCTTATGGGGGAAGGAAAGATAATT 1292
Query 361 TACCATGCTCCACGAGCTGATATCTGCAGATTCTTTGAAGACTGTGGATTTAAGTGTCCA 420
|||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1293 TACCATGCTCCACGCGCTGATATCTGCAGATTCTTTGAAGAGTTTGGATTTAAGTGTCCA 1352
Query 421 GAGAGGAAAGGCGTTGCTGACTTCCTCCAAGAGGTTATGTCTAGAAAA-GATCAAGAACA 479
||||| ||||||||||||||||| ||||||||| ||||||| | |||| || ||||||||
Sbjct 1353 GAGAGAAAAGGCGTTGCTGACTTTCTCCAAGAGATTATGTCGA-AAAAGGACCAAGAACA 1411
Query 480 ATATTGGTGCCACAAAGGCAAGCCCTACAGTTATATATCTGTTGATTCATTCATTAATAA 539
|||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1412 ATATTGGTGCCACAGAGACAAGCCCTACAGTTATATATCTGTTGATTCCTTCATTAATAA 1471
Query 540 GTTTAAAGAATCAAATCTTGGGTTGCTGCTAAAGGAAGAACTGTCAAAGCCGTTTGATAA 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1472 GTTTAAAGAATCAAATCTTGGGTTGCTGCTAAAGGAAGAACTGTCAAAGCCGTTTAATAA 1531
Query 600 ATCCCAGACTCGCAAGGATGG 620
||||||||||||||||||||
Sbjct 1532 GTCCCAGACTCGCAAGGATGG 1552
Score = 950 bits (514), Expect = 0.0
Identities = 580/611 (95%), Gaps = 8/611 (1%)
Strand=Plus/Plus
Query 2150 AGTTTGATATTCATTCTCTTAATATAACTGTGGAAGAGTCTTTGAAATATTCTGCATGGC 2209
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2788 AGTTTGATATTCATTCTCCTAATATAACTGTGGAAGAGTCTTTGAAATATTCTGCATGGC 2847
Query 2210 TTCGACTCCCCTATAACATTGATTCAAAGACAAAGAACGAACTCGTCAAAGAAGTCCTCG 2269
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2848 TTCGACTCCCCTATAACATAGATTCAAAGACAAAGAACGAACTCGTCAAAGAAGTCCTCG 2907
Query 2270 AGACAGTTGAGCTTGA-GAATATCAAAGATTCCATGGTGGGACTTCCTGGAATAAGTGGT 2328
|||||||||||||||| | | |||||||||||| ||||||||||||| ||||||||||||
Sbjct 2908 AGACAGTTGAGCTTGATG-ACATCAAAGATTCCGTGGTGGGACTTCCGGGAATAAGTGGT 2966
Query 2329 TTATCTACT-GAACAACGCAGAAGGCTGACTATAGCCGTGGAGCTTGTTTCTAACCCTTC 2387
||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 2967 TTATCTA-TAGAACAACGCAAAAGGCTGACTATAGCCGTGGAGCTTGTTGCTAACCCTTC 3025
Query 2388 CATCATATTTATGGATGAACCTACCACAGGGCTGGACGCAAGAGCCGCAGCCATTGTTAT 2447
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3026 CATCATATTTATGGATGAACCTACCACAGGGCTGGACGCAAGAGCCGCCGCCATTGTTAT 3085
Query 2448 GAGAGCTGTGAAAAATGTTGCTGAGACTGGGAGAACGGTTGTTTGCACGATCCACCAGCC 2507
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3086 GAGAGCTGTCAAAAATGTTGCTGAGACTGGGAGAACGGTTGTTTGCACGATCCACCAGCC 3145
Query 2508 GAGCATAGATATCTTTGAGACATTTGATGAGCTGATCCTGATGAAAAATGGGGGACAGTT 2567
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 3146 GAGCATAGATATCTTTGAGACATTTGATGAGCTGATCCTAATGAAAAATGGGGGACAGCT 3205
Query 2568 TGTCTACTATGGTCCTCCTGGACA-ACATTCAAGTAAGGTTATCGAGTACTTCGAGAG-T 2625
|||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| |
Sbjct 3206 TGTCTACTATGGTCCTCCTGGACAGA-ATTCAAGTAAGGTTATCGAATACTTCGAGAGCT 3264
Query 2626 ATCCCTGGAGTTCCCAAGATCCAAAAGAATTGTAATCCAGCCACTTGGATGTTAGAGATT 2685
|| ||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 3265 -TCTCTGGACTTCCCAAGATCCAAAAGAATTGTAATCCAGCCACTTGGATCTTAGATATT 3323
Query 2686 ACTTGTAAATCTGCACAGGATAAACTTGGAATTGATTTTGCACAATTGTACAAGGATTCA 2745
||| ||||||||||| |||| ||||||||||| |||||| |||||| ||||||||||||
Sbjct 3324 ACTAGTAAATCTGCAGAGGAAAAACTTGGAATAGATTTTTCACAATCATACAAGGATTCA 3383
Query 2746 ACTCTGTATAA 2756
|||||||||||
Sbjct 3384 ACTCTGTATAA 3394
> AT4G15215.1 | Symbols: PDR13, ATPDR13 | pleiotropic drug resistance
13 | chr4:8672070-8679176 FORWARD LENGTH=4475
Length=4475
Score = 1498 bits (811), Expect = 0.0
Identities = 999/1091 (92%), Gaps = 8/1091 (1%)
Strand=Plus/Plus
Query 1065 TGGAGCT-TTAGTTTTTAATGCGTTAGTCACAATGACCGTTTTTCTACAAGCTGGTGCTA 1123
|||| || ||||| || |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1518 TGGA-CTGTTAGTGTTCAATGCGTTAGTCACAATGACCGTTTTTCTACAAGCTGGAGCTA 1576
Query 1124 CGACGGATTCTCCACATGGGAATTATCTTATGGGTTCTCTATTCACTGCTCTCTTTAGAC 1183
||| |||| ||| |||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1577 CGAGGGATGCTCGTCATGGGAATTATCTTATGGGTTCTATGTTCACTGCTCTCTTTAGAC 1636
Query 1184 TTCTTGCTGATGGGCTTCCAGAACTCACTTTGACTATCTCTAGATTGGGAGTGTTCTGCA 1243
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1637 TTCTTGCCGATGGGCTTCCAGAACTCACTTTGACTATCTCCAGATTGGGAGTGTTCTGCA 1696
Query 1244 AACATAAAGATTTATACTTCTATCCTGCTTGGGCATATGCAATTCCTTCAATTATCTTAA 1303
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1697 AACAGAAAGATTTATACTTCTATCCTGCTTGGGCATATGCAATTCCTTCGATTATCTTAA 1756
Query 1304 AGATACCTCTTTCGGTTCTCGATTCATTCATCTGGACATTACTGACATATTATGTCATTG 1363
|||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||
Sbjct 1757 GGATACCTCTTTCGGTTCTTGATTCATTTATTTGGACAGTACTGACATATTATGTCATTG 1816
Query 1364 GTTACAGCCCCGAGGTCAAAAGGTTCTTCCTGCACTTCCTTATCTTATCT-ACATTCAAC 1422
||||||| ||||| ||| ||||||||||| ||||||| |||||||| || |||||| ||
Sbjct 1817 GTTACAGTCCCGAAGTCGGAAGGTTCTTCCGGCACTTCATTATCTTA-CTTACATTCCAC 1875
Query 1423 CTTTCATGTGTATTAATGTTTCGCGCTATAGCGGCAATATTTCACACAATTGTTGCTTCC 1482
||||||||| ||| ||||||||||||||||||| |||| | || |||| ||||||||| |
Sbjct 1876 CTTTCATGTATATCAATGTTTCGCGCTATAGCGTCAATCTGTCGCACATTTGTTGCTTGC 1935
Query 1483 ACAATCACTGGAGCTATTTCCATATTGGTTCTCTCATTATTCGGCGGCTTCATTATTCCA 1542
|||| |||||||||||||| ||||| ||||| |||| || || ||||| | ||||||
Sbjct 1936 TCAATTACTGGAGCTATTTCGGTATTGCTTCTCGCATTGTTTGGAGGCTTTGTGATTCCA 1995
Query 1543 AAATCATCAATGCCTGCTTGGCTGGGATGGGGATTCTGGCTTTCTCCCTTGTCATATGCT 1602
|||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1996 AAATCATCCATGCCTACTTGGCTGGGTTGGGGATTCTGGCTTTCTCCCTTGTCATATGCT 2055
Query 1603 GAGATTGGTCTAAGCGCAAATGAATTTTTCTCCCCACGGTGGAGCAAGTTAATCTCTGGC 1662
||||||||| ||| |||||||||||||||||| ||||||||||| ||||||| |||||||
Sbjct 2056 GAGATTGGTTTAACCGCAAATGAATTTTTCTCTCCACGGTGGAGAAAGTTAACCTCTGGC 2115
Query 1663 AACACTACGGCCGGGGAACAAATGTTAGATATCCGTGGGTTGAATTTCGGTAGGCACTCT 1722
|||| ||| |||||||||||| |||||||| ||||||| |||||||| ||||||||||||
Sbjct 2116 AACATTACAGCCGGGGAACAAGTGTTAGATGTCCGTGGATTGAATTTTGGTAGGCACTCT 2175
Query 1723 TACTGGACAGCTTTTGGTGCTTTAGTCGGGTTTGTCTTGTTCTTCAATGCACTCTATGTG 1782
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct 2176 TACTGGACAGCTTTTGGTGCTTTAGTTGGGTTTGTCTTGTTCTTCAATGCCCTCTACACG 2235
Query 1783 TTGGCCCTAACGTATCAGAATAATCCGA-AAAGATCCCGTGCTATGGTCTCGCATGGGAA 1841
|||||||| || |||| ||||||||| | |||||||||||||||| ||||||||||||||
Sbjct 2236 TTGGCCCTGACATATCGGAATAATCC-ACAAAGATCCCGTGCTATTGTCTCGCATGGGAA 2294
Query 1842 GTACTCTCAGCGCAT-AGAAGAAGATTTTAAACCCTGCCCTGAAATCACTTCCCGAGCTA 1900
| |||||||| || | ||||||||||||||||||||| ||||||||||| || |||||||
Sbjct 2295 GAACTCTCAGTGC-TCAGAAGAAGATTTTAAACCCTGTCCTGAAATCACATCGCGAGCTA 2353
Query 1901 AAACAGGAAAAGTTATCTTGCCTTTTAAGCCCCTCACTGTCACATTTCAAAACGTGCAGT 1960
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 2354 AAACAGGAAAAGTTATCTTGCCTTTTAAGCCACTCACTGTCACATTTCAAAACGTCCAGT 2413
Query 1961 ATTATATTGAGACTCCTCAGGGAAAGACGTGGCAACTTCTCTCTGATGTTACAGGCGCGT 2020
|||||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||
Sbjct 2414 ATTATATTGAGACTCCTCAGGGGAAGACACGGCAACTTCTCTTTGATATTACAGGCGCGT 2473
Query 2021 TGAAGCCCGGTGTTCTCACATCTCTAATGGGTGTCAGTGGAGCAGGGAAAACGACTCTTC 2080
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2474 TGAAGCCCGGTGTTCTCACATCTCTGATGGGTGTCAGTGGAGCAGGGAAAACGACTCTTC 2533
Query 2081 TTGATGTTCTTTCTGGAAGGAAAACCCGGGGTATCATCAAAGGAGAGATCAAAGTAGGCG 2140
||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 2534 TTGATGTCCTTTCTGGAAGGAAAACCCGCGGTATCATCAAAGGAGAGATCAGAGTAGGCG 2593
Query 2141 GGTATCCTAAG 2151
|||||||||||
Sbjct 2594 GGTATCCTAAG 2604
Score = 944 bits (511), Expect = 0.0
Identities = 635/696 (91%), Gaps = 4/696 (1%)
Strand=Plus/Plus
Query 2757 AAATAATCAGCAAGATCTTATCAGCATATTTGGTTCCATGTACACTCTAGTAATCTTCCC 2816
||||||||||||||||||| | ||||||||||| || ||||||||| ||||||||||| |
Sbjct 3480 AAATAATCAGCAAGATCTTTTTAGCATATTTGGCTCAATGTACACTATAGTAATCTTCTC 3539
Query 2817 GGGAATGAACAACTGTGGGGCAGTGATAAACTTCGTTGCAGCGGAACGCAATGTTTTCTA 2876
|||||| |||||||||| | |||| || |||||| ||||| | || ||||||||||||||
Sbjct 3540 GGGAATAAACAACTGTGCGACAGTTATGAACTTCATTGCAACCGAGCGCAATGTTTTCTA 3599
Query 2877 CCGTGAAAGGTTTGCACGGATGTACTCCTCATGGGCGTATTCATTTTCTCAGGTCCTAGT 2936
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3600 CCGTGAAAGGTTTGCGCGGATGTACTCCTCATGGGCGTATTCATTTTCTCAGGTCCTAGT 3659
Query 2937 TGAGGTTCCATACTCACTACTCCAGTC-CGTTCTATGTACAATAATCGTATATCCTATGA 2995
||||||||||||||||||||||||||| | | |||||||| || || |||||||||||||
Sbjct 3660 TGAGGTTCCATACTCACTACTCCAGTCTC-TACTATGTACGATCATTGTATATCCTATGA 3718
Query 2996 TCGGCTACCATATGTCAGTTTACAAGATGTTTTGGAGCTTGTACAGCATCTTCTGCTCGT 3055
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3719 TCGGCTACCATATGTCTGTTTACAAGATGTTTTGGAGCTTGTACAGCATCTTCTGCTCGT 3778
Query 3056 TGCTCATCTTCAACTACTGCGGGATGCTTATGGTTGCTTTGACGCCAAACGTTCACATGG 3115
|||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 3779 TGCTTATCTTCAACTACTGTGGGATGCTTATGGTTGCTTTGACGCCAAACATTCACATGG 3838
Query 3116 CAGTGACTCTACGCTCGTCTTTTTTCTCCATGTTAAATCTGTTTGCTGGCTTTGTCATTC 3175
|| ||||| | ||||| |||||||||||||| | ||||||||||||||||||||||| |
Sbjct 3839 CATTGACTTTGCGCTCAACTTTTTTCTCCATGGTGAATCTGTTTGCTGGCTTTGTCATGC 3898
Query 3176 CAAAGCAGAAAATCCCAAAATGGTGGATATGGATGTACTACCTGAGCCCGACATCATGGG 3235
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 3899 CAAAACAGAAAATCCCAAAATGGTGGATATGGATGTACTACCTGAGCCCTACATCGTGGG 3958
Query 3236 TGTTGGAAGGATTATTGAGTTCGCAATATGGAGATGTCGACAAAGAGATAACAGTATTTG 3295
|||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 3959 TGTTGGAAGGATTACTGAGTTCGCAGTATGGAGATGTCGAGAAAGAGATAACAGTATTTG 4018
Query 3296 GAGAGAAGAAGAGAGTTTCAGCTTTCTTGGAAGATTACTTTGGTTACAAACATGACTCAT 3355
||||||||||||| ||||||||||||||||| |||||||| || |||||||||||||| |
Sbjct 4019 GAGAGAAGAAGAGTGTTTCAGCTTTCTTGGAGGATTACTTCGGCTACAAACATGACTCCT 4078
Query 3356 TGGTTATAGTAGCGTTTGTTCTCATCGCTTATCCCATTATCGTGGCAACTCTATTTGCCT 3415
||| | | ||||||||||| ||||| |||| ||| || ||||| || |||| |||||||
Sbjct 4079 TGGCTGTTGTAGCGTTTGTCCTCATTGCTTTTCCTATCATCGTTGCTTCTCTTTTTGCCT 4138
Query 3416 TCTTCATGA-CTAAACTGAATTTCCAAAAGAAATAG 3450
||||||||| | ||||| ||||| ||||||||||||
Sbjct 4139 TCTTCATGAGC-AAACTCAATTTTCAAAAGAAATAG 4173
Score = 917 bits (496), Expect = 0.0
Identities = 569/605 (94%), Gaps = 2/605 (0%)
Strand=Plus/Plus
Query 2150 AGTTTGATATTCATTCTCTTAATATAACTGTGGAAGAGTCTTTGAAATATTCTGCATGGC 2209
|||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||
Sbjct 2645 AGTTTGATATTCATTCCCCTAATATAACTGTGGAAGAGTCTTTGAAATATTCTGCTTGGC 2704
Query 2210 TTCGACTCCCCTATAACATTGATTCAAAGACAAAGAACGAACTCGTCAAAGAAGTCCTCG 2269
||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||
Sbjct 2705 TTCGACTCCCCTATAACATCGATGCAAAGACCAAGAACGAACTCGTCAAAGAAGTCCTCG 2764
Query 2270 AGACAGTTGAGCTTGAGAATATCAAAGATTCCATGGTGGGACTTCCTGGAATAAGTGGTT 2329
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2765 AGACAGTTGAGCTTGAGGATATCAAAGATTCCATGGTGGGACTTCCTGGAATAAGTGGTT 2824
Query 2330 TATCTACTGAACAACGCAGAAGGCTGACTATAGCCGTGGAGCTTGTTTCTAACCCTTCCA 2389
||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 2825 TATCTACAGAACAACGCAAAAGGCTGACAATAGCCGTGGAACTTGTTTCTAACCCTTCCA 2884
Query 2390 TCATATTTATGGATGAACCTACCACAGGGCTGGACGCAAGAGCCGCAGCCATTGTTATGA 2449
|||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 2885 TCATATTTCTGGATGAACCTACAACAGGGCTGGATGCAAGAGCCGCAGCCATTGTTATGA 2944
Query 2450 GAGCTGTGAAAAATGTTGCTGAGACTGGGAGAACGGTTGTTTGCACGATCCACCAGCCGA 2509
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 2945 GAGCTGTGAAAAATGTTGCTGAGACTGGGAGAACAGTTGTTTGCACGATCCACCAGCCTA 3004
Query 2510 GCATAGATATCTTTGAGACATTTGATGAGCTGATCCTGATGAAAAATGGGGGACAGTTTG 2569
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 3005 GCATAGATATCTTTGAGACATTTGATGAGCTGATCCTGATGAAAGATGGGGGACAGCTTG 3064
Query 2570 TCTACTATGGTCCTCCTGGACAACATTCAAGTAAGGTTATCGAGTACTTCGAGAGTATCC 2629
||||||||||||||| |||| |||||||||||||||||||| | ||||| ||||| ||||
Sbjct 3065 TCTACTATGGTCCTCTTGGAAAACATTCAAGTAAGGTTATCAAATACTTTGAGAGCATCC 3124
Query 2630 CTGGAGTTCCCAA-GATCCAAAAGAATTGTAATCCAGCCACTTGGATGTTAGAGATTACT 2688
|||||||||| || | ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3125 CTGGAGTTCCAAAAG-TCCAAAAGAATTGTAATCCAGCCACTTGGATGTTAGATATTACT 3183
Query 2689 TGTAAATCTGCACAGGATAAACTTGGAATTGATTTTGCACAATTGTACAAGGATTCAACT 2748
|||||||||||| || | | ||||||||| |||||||||||| |||||||||||||||
Sbjct 3184 TGTAAATCTGCAGAGCACAGACTTGGAATGGATTTTGCACAAGCATACAAGGATTCAACT 3243
Query 2749 CTGTA 2753
|||||
Sbjct 3244 CTGTA 3248
Score = 822 bits (445), Expect = 0.0
Identities = 566/620 (91%), Gaps = 25/620 (4%)
Strand=Plus/Plus
Query 1 ATGAAGGCAATATCTGTTGAAGGTTTGAAAAACAATTTGCAAACTGACTATATCCTAAAG 60
|||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||
Sbjct 811 ATGAAGGCAATATCTGTTGAAGGTTTGAAAAACAGTATGCAAACTGACTATATTCTAAAG 870
Query 61 ATCCTAGGACTCGATATCTGTGCAGATACACGAGTTGGAGATGCCACGAGACCTGGAATA 120
||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 871 ATCCTGGGACTCGATATCTGTGCAGATACACGAGCAGGAGATGCCACAAGACCTGGAATA 930
Query 121 TCTGGTGGCCAAAAGAGGAGGTTGACAACAGGGGAACTCGTTGTGGGTCCAGCTACTACC 180
|||||||||||||||||||||||||||||| | | | | ||||| |
Sbjct 931 TCTGGTGGCCAAAAGAGGAGGTTGACAACA---G----C--------T--A-CTACT--C 970
Query 181 TTGTTCATGGATGAAATATCGAATGGTTTAGACAGCTCAACTACGTTCCAGATAGTGTCA 240
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 971 -TGTTAATGGATGAAATATCGAATGGTTTGGACAGCTCAACTACGTTCCAGATAGTGTCG 1029
Query 241 TGTCTCCAACAGATGGCACATATAGCTGAAGCCACCATACTGATTTCACTTCTTCAGCCT 300
|| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1030 TGCCTCCAACAGTTGGCACATATAGCTGGAGCCACCATACTGATTTCACTTCTTCAGCCT 1089
Query 301 GCGCCAGAAACGTTTGAGCTTTTCGACGATGTGATTCTTATGGGGGAAGGAAAGATAATT 360
|| |||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 1090 GCACCAGAAACATTTGAGCTTTTTGACGATGTGATTCTTTTGGGGGAAGGAAAGATAATT 1149
Query 361 TACCATGCTCCACGAGCTGATATCTGCAGATTCTTTGAAGACTGTGGATTTAAGTGTCCA 420
|||||||||||| ||||||||||||| | ||||||||||| ||||||||||| ||||||
Sbjct 1150 TACCATGCTCCAAGAGCTGATATCTGTAAATTCTTTGAAGGTTGTGGATTTAAATGTCCA 1209
Query 421 GAGAGGAAAGGCGTTGCTGACTTCCTCCAAGAGGTTATGTCTAGAAAAGATCAAGAACAA 480
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1210 GAGAGAAAAGGCGTTGCTGACTTCCTCCAGGAGGTTATGTCTAGAAAAGATCAAGAACAA 1269
Query 481 TATTGGTGCCACA-AAGGCAAGCCCTACAGTTATATATCTGTTGATTCATTCATTAATAA 539
||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1270 TATTGGTGCCACAGAA-GCAAGCCCTACAGTTATATATCTGTTGATTCATTCATTAAGAA 1328
Query 540 GTTTAAAGAATCAAATCTTGGGTTGCTGCT-AAAGGAAGAACTGTCAAAGCCGTTTGATA 598
|||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||||||
Sbjct 1329 GTTTAACGAATCAAATCTTGGGTTTTTGCTGAAA-GAAGAACTGTCAAAGCCGTTTGATA 1387
Query 599 AATCCCAGACTCGCAAGGAT 618
||||||||||||||||||||
Sbjct 1388 AATCCCAGACTCGCAAGGAT 1407
> AT4G15236.1 | Symbols: | ABC-2 and Plant PDR ABC-type transporter
family protein | chr4:8696683-8702727 FORWARD LENGTH=4167
Length=4167
Score = 510 bits (276), Expect = 3e-143
Identities = 516/631 (82%), Gaps = 20/631 (3%)
Strand=Plus/Plus
Query 1 ATGAAGGCA-ATATCTGTTGAAGGTTTGAAAAAC-AATTTGCAAACTGACTATATCCTAA 58
||||||||| | ||| ||| ||| || |||||| ||| ||||||| ||||||||| |||
Sbjct 805 ATGAAGGCAGCT-TCTATTG-AGGGTTCAAAAACAAATCTGCAAACCGACTATATCTTAA 862
Query 59 AGATCCTAGGACTCGA-TATCTGTGCAGATACACGAGTTGGAGATGCCACGAGACCTGGA 117
| |||||||||||| | |||||||||||||||||| ||||||||||| ||||||| |||
Sbjct 863 AAATCCTAGGACTC-ACTATCTGTGCAGATACACGTGTTGGAGATGCTTCGAGACCAGGA 921
Query 118 ATATCTGGTGGCCAAAAGAGGAGGTTGACAACAGGGGA-ACTCG-TTGTGGGTCC-AGCT 174
|||||||||||||||||||| || || || ||||| || | | | |||| ||||| | |
Sbjct 922 ATATCTGGTGGCCAAAAGAGAAGATTAACTACAGGTGAGA-T-GATTGTAGGTCCAATC- 978
Query 175 ACTACCT-TGTTCATGGATGAAATATCGAATGGTTTAGACAGCTCAACTACGTTCCAGAT 233
| | || |||||||||||||||||||||||||||| || || |||||||| ||||||||
Sbjct 979 A-AAACTCTGTTCATGGATGAAATATCGAATGGTTTGGATAGTTCAACTACATTCCAGAT 1037
Query 234 AGTGTCATGTCTCCAACAGATGGCACATATAGCTGAAGCCACCATACTGATTTCACTTCT 293
| ||||||||||||||| | |||| | || |||||| |||||| || ||||||| ||
Sbjct 1038 TCTATCATGTCTCCAACAGTTTGCACGTCTATCTGAAGGAACCATATTGGTTTCACTGCT 1097
Query 294 TCAGCCTGCGCCAGAAACGTTTGAGCTTTTCGACGATGTGATTCTTATGGGGGAAGGAAA 353
||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 1098 TCAGCCTGCACCAGAAACGTTTGAGCTTTTCGACGATTTGATTCTTATGGGAGAAGGAAA 1157
Query 354 GATAATTTACCATGCTCCACGAGCTGATATCTGCAGATTCTTTGAAGACTGTGGATTTAA 413
|||||| || || | |||||| | | ||| || || |||||||| || |||||||||||
Sbjct 1158 GATAATCTATCACGGTCCACGGGATTTTATATGTAGTTTCTTTGAGGATTGTGGATTTAA 1217
Query 414 GTGTCCAGAGAGGAAAGGC-GTTGCTGACTTCCTCCAAGAGGTTATGTCTAGAAAAGATC 472
|||||| |||||||| | |||||||| ||||| || |||||||| || || |||||||
Sbjct 1218 ATGTCCACAGAGGAAAT-CTGTTGCTGAATTCCTTCAGGAGGTTATCTCAAGGAAAGATC 1276
Query 473 AAGAACAATATTGGTGCCACAAAGGCAAGCCCTACAGTTATATATCTGTTGATTCATTCA 532
|||||||||||||||| |||| || ||| || || | ||| | ||| |||||||||| |
Sbjct 1277 AAGAACAATATTGGTGTCACAGAGACAAACCATATTGCTATGTCTCTATTGATTCATTTA 1336
Query 533 TTAATAAGTTTAAAGAA-TCAAATCTTGGGTTGCTGCTA-AAGGAAGAACTGTCAAAGCC 590
|| | || |||||| || || |||||||| | | ||| ||| | ||||| || ||| |
Sbjct 1337 TTGAGAAATTTAAA-AAGTCTGATCTTGGGCTACAACTACAAG-ACGAACTCTCCAAGAC 1394
Query 591 GTTTGATAAATCCCAGACTCGCAAGGATGGA 621
| ||| || || ||||||| |||||||||
Sbjct 1395 ATATGACAAGTCTCAGACTCAAAAGGATGGA 1425
> AT4G15233.2 | Symbols: | ABC-2 and Plant PDR ABC-type transporter
family protein | chr4:8688289-8694558 FORWARD LENGTH=4201
Length=4201
Score = 429 bits (232), Expect = 9e-119
Identities = 532/672 (79%), Gaps = 40/672 (6%)
Strand=Plus/Plus
Query 1094 CAATGACCGTTTTTCTACAAG-CT-GGTGCTACGACG-GATTCTCCACATGGGAATTATC 1150
||||||| |||| ||||| | || ||| |||| | | ||||||| |||| |||||||
Sbjct 1607 CAATGACTGTTTATCTAC-GGACTGGGT-CTAC-AAGAGATTCTCTTCATGCTAATTATC 1663
Query 1151 TTATGGGTTCTCTATTC-ACTGCTCTCTTTAGACTTCTTGCTGATGGGCTTCCAGAACTC 1209
||||||||||| | ||| || ||||||||| ||||||||||||||| ||||||||||||
Sbjct 1664 TTATGGGTTCTTTGTTCTTCT-CTCTCTTTAAACTTCTTGCTGATGGACTTCCAGAACTC 1722
Query 1210 ACTTTGACTATCTCTAG-ATTGGGAGTGTTCTGCAAACATAAA-GATTTATACTTCTATC 1267
|| ||||| ||||| || ||| | ||||||||||| || ||| || ||||||| ||||
Sbjct 1723 ACATTGACAATCTCGAGAATT-GCCGTGTTCTGCAAGCA-AAAGGAGCTATACTTTTATC 1780
Query 1268 CTGCTTGGGCATATGCAATTCCTTCAATTATCTTAAAGATACCTCTTTCGGTTCTCGATT 1327
||||||||||||||||||||||||| ||| || |||||||| | || |||| || |
Sbjct 1781 CTGCTTGGGCATATGCAATTCCTTCTGCTATTTTGAAGATACCGATCTCATTTCTTGAAT 1840
Query 1328 CATTCATCTGGACATTACTGACATATTATGTCATTGGTTACAGCCCCGAGGTCAAAAGGT 1387
||||| |||||||| | ||||||||||||||||||||||||| || ||| | ||||
Sbjct 1841 CATTCCTCTGGACAATGTTGACATATTATGTCATTGGTTACAGTCCTGAGATGGGCAGGT 1900
Query 1388 TC-TTCCTGC-ACTTCCTT-ATCTTATCTACATT-CAACCTTTCATGTGTATTAATGTTT 1443
|| ||| || | ||| || ||||||| | | || || |||||||||| ||| ||||||
Sbjct 1901 TCATTC--GCCAGTTC-TTGATCTTATTTGCTTTACA-CCTTTCATGTATATCAATGTTC 1956
Query 1444 CGCGCTATAGCGGCAATATTTCACACAATT-GTTGCTT-CCACAATCACTGGA-GCTATT 1500
|| |||||||| || | |||| | | || |||| || |||||| | |||| || ||
Sbjct 1957 CGTGCTATAGCTGCTGTCTTTCG-AGATTTTGTTG-TTGCCACAACCGTTGGAAGC-ATC 2013
Query 1501 TCCATATTGGTTCTCTCATTATTCGGCGGCTTCATTATTCCAAAATCATCAATGCCTGCT 1560
|| ||| || |||||||| ||||||| || || ||| ||| |||| | ||||||||| ||
Sbjct 2014 TCTATAGTGCTTCTCTCAGTATTCGGAGGATTTATTGTTCGAAAACCCTCAATGCCTTCT 2073
Query 1561 TGGCTGG-GATGGGGATTCTGGCTTTCTCCCTTGTCATATGCTGAGATTGGTCTAAGC-G 1618
||||| | | |||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct 2074 TGGCTTGAG-TGGGGATTCTGGCTTTCTCCATTGTCATATGCTGAGATTGGTCTAA-CTG 2131
Query 1619 CAAATGAATTTTTCTCCCCACGGTGGAGCAAGTTAATC-TCTGGCAACACTACGGCCGGG 1677
|||||||||||||| | ||||||||| | ||| ||| | |||| |||| || |||
Sbjct 2132 CAAATGAATTTTTCGCTCCACGGTGGGGGAAGATAA-CATCTGAAAACAGAACTTTGGGG 2190
Query 1678 GAACAAATGT-TAGATA-TCCGTGGGTTGAA-TTTCGGTAGGCACTCTTACTGGACA-GC 1733
|||||| | | ||||| || | |||||||| ||| || | || |||||||||| | ||
Sbjct 2191 GAACAAGT-TCTAGATGCTC-GCGGGTTGAACTTT-GGAAATCAATCTTACTGGA-ATGC 2246
Query 1734 TTTTGGTGCTTT 1745
||||| |||||
Sbjct 2247 ATTTGGCGCTTT 2258
> AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708924-9714089 FORWARD LENGTH=2940
Length=2940
Score = 198 bits (107), Expect = 3e-49
Identities = 121/128 (95%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 674 TGGTTTCGCTCATGATCGATCAGTTGAAGCATTTGCCTTCAATTATTAAGGGTGGTCTCT 733
|||||||| | ||||| ||||||||||||||||||||||| || ||||||||||||||||
Sbjct 969 TGGTTTCGTTGATGATTGATCAGTTGAAGCATTTGCCTTCTATCATTAAGGGTGGTCTCT 1028
Query 734 TGAGCAGTAGCCAGAGACCAGAGGAAGCAACAGAGACATTGCGGAAACTTAAAGAAGGCA 793
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1029 TGAGCAGTAGCCAGAGACCTGAGGAAGCAACGGAGACATTGCGGAAACTTAAAGAAGGCA 1088
Query 794 TAATAAAG 801
||||||||
Sbjct 1089 TAATAAAG 1096
Score = 182 bits (98), Expect = 3e-44
Identities = 112/119 (94%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 845 GGTCTCATAACTTCCGCCCTTCATACATGAGACTCAAGGCATCAATGCGGTTTTCTGAAC 904
|||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||
Sbjct 1209 GGTCTCATAACTTCCGTCCTTCATATATGAGACTCAAGGCATCAATGCTGTTTTCTGAAC 1268
Query 905 TCAAGGCAGAATGCATTCTCGCGATGACTGCAACAGCCACTACTATGACTCTTGAGGCT 963
|||||||||||||||||||||||||||| ||||| |||||||| ||||||||| |||||
Sbjct 1269 TCAAGGCAGAATGCATTCTCGCGATGACCGCAACTGCCACTACAATGACTCTTCAGGCT 1327
Score = 91.6 bits (49), Expect = 5e-17
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 964 TATGAGACTGACATGATAAGCAAGTATTTATGCGATAACAACATCAATTCAAAGG 1018
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1505 TATGAGACTGACATGATAAGCAAGTATTTACGCGATAACAACATCAATGCAAAGG 1559
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 171721445889
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5