BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890803
Length=1212
Score E
Sequences producing significant alignments: (Bits) Value
AT1G10190.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1491 0.0
AT4G15050.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1467 0.0
AT4G15053.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1182 0.0
AT4G15056.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 549 2e-155
> AT1G10190.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr1:3343686-3345632 REVERSE LENGTH=1311
Length=1311
Score = 1491 bits (807), Expect = 0.0
Identities = 1077/1204 (89%), Gaps = 31/1204 (3%)
Strand=Plus/Plus
Query 18 AGTGATATGGATGTTCTTAATGTGTTGCATCTTTGGTAACATAATTGTAAGTCATCACAA 77
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct 47 AGTGATATGGATGTTCTTAATGTGTTGCATCTTTGGTAACATAATTATAAATCATAACAA 106
Query 78 TGACTTCGTGGAAGCCAAGAGCTTTTCTAAA-TCTGAAGATTTAGAAATCGAGAAGAGAC 136
|||||| || ||||| |||||| |||||||| | ||||||||||||||||||||||||||
Sbjct 107 TGACTTTGTTGAAGCTAAGAGCCTTTCTAAAGT-TGAAGATTTAGAAATCGAGAAGAGAC 165
Query 137 TAAAGACTATCAACAAACCCGCCGTCAAGATCATCAAGACTATAGATGGAGAAAGATACG 196
||| ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||
Sbjct 166 TAAGGACTATCAACAAACCTGCTGTCAAGATCATCAAGAGTATAGATGGAGAAAGATACG 225
Query 197 GATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCTATGAAGAATCATACAT 256
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 226 GATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCACCCTTCAATGAAGAATCACACAT 285
Query 257 ACCATTACAAGATGCGTCCAATATGGAAAGGAATGAGAGAAAGAAAGACAAACAATACCG 316
|||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||
Sbjct 286 ACCATTACAAGATGCGCCCAATATGGAAAAGAATGAGAGAAAGAAAGACAAATAATACCA 345
Query 317 GTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATACAAA 376
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 ATTTTGGTTACCTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATACAAA 405
Query 377 GAGTCACTAAAGACGATCTTTTGAGATTCGACTCATTTGGCGATAATCATAAACCCCGTG 436
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 406 GAGTCACCAAAGAAGATCTTTTGAGATTCGACTCATTTGGCGATAATCATAAACCTCGTG 465
Query 437 GCTCTTGGAACACTACCACTTATGATCCTAATAGTCCTCTTCATCCCGACCAACATCATT 496
|||||||||| ||||||| ||||| ||||||| | | | ||||||||||||
Sbjct 466 GCTCTTGGAATTTTACCACTGATGATACTAATAG------TGA---CAACCAACATCATT 516
Query 497 ATGCGGTGGCTCGGACGTTTGCGCC-AGACAAAAGGTTCAATGGAGCAACAATGGAACTT 555
|||||||||| ||||| ||| ||| |||||| ||||||||||||||||| |||||||||
Sbjct 517 TTGCGGTGGCTAGGACGGTTG-GCCAAGACAAGAGGTTCAATGGAGCAACGATGGAACTT 575
Query 556 TGTATAACCGCTCCTGCGGTTAAACCAACCCAATTCAGTGCTTCTCGACTTCACATTCAG 615
||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||||
Sbjct 576 TGTTTAACCGCTCCTAAGGTTAGGCCAAACCAATTCAGTGCTTCTCGACTTCACATTCAG 635
Query 616 CTTGGAAGTGATTTCATCCAAACCGGTTTTACTGTAAATCCAGA-ATTGTACAAGGAC-A 673
|||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |
Sbjct 636 ATTGGAAGTGATTTCCTCCAAACCGGTTTTACTGTAAATCCA-ACATTGTACAAGGACGA 694
Query 674 GCCAACCTCGGACTTACGTCTATGCAAATTCAGGTGGTAAATCATGTTACAATAGCAACT 733
|||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||
Sbjct 695 -CCAACCTCGGACTTTCGTCTATACAAATTCAGGTGGAAAATCATGTTACAATAATGACT 753
Query 734 GCGACGTTGGAATGATACTCGTTCGTCAAGATTTTCCA-CTTGGTTTGGCATTAAAGCCA 792
||||||| |||||||||||||||||||||||||||| | |||||| |||||||| ||||
Sbjct 754 GCGACGTAGGAATGATACTCGTTCGTCAAGATTTTC-ATCTTGGTATGGCATTATTGCCA 812
Query 793 GTCTCTGTTCGTGGTGCTAAGAAAAGTGAATATGGAATCTTCGGTCTAATCAAGGACGaa 852
|| ||||||||||||||||||| || | | |||| |||||||||||||||||||||| ||
Sbjct 813 GTGTCTGTTCGTGGTGCTAAGACAACTCATTATGCAATCTTCGGTCTAATCAAGGACCAA 872
Query 853 aaaaaTGGAAATTGGTGGTTGCAATTTGGTGATGCGGCAGAGGAAATTGGATTTTGGCCG 912
| |||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||
Sbjct 873 ATAAATGGAAATTGGTGGTTGCAATTTGGTAATGCTGCAGAGGAAGTTGGATTTTGGCCG 932
Query 913 TCGAGTAGGTTTCATCAAAGCTCTGGAAATCTCGTCGAGTGGGGTGGAGAAGTGTACAGC 972
|||||||| ||||||||||||||||||||| | || |||||||||||||||| ||| ||
Sbjct 933 TCGAGTAGATTTCATCAAAGCTCTGGAAATTTGGTGGAGTGGGGTGGAGAAGCGTATAGT 992
Query 973 GCCTCACTGCCGAGTCCTGAAATGGGATATGGATATTTTCTTGCT-C-ACGATATG-GTT 1029
|| |||| |||||||||| |||||||||||||||||||||||| | | | | |||| | |
Sbjct 993 GCATCACAGCCGAGTCCTCAAATGGGATATGGATATTTTCTTGATGCTA-G-TATGCGCT 1050
Query 1030 TACGATGCATATATCAAACGGATATCCGTACTTGACGGTTTTAATAACATTGACCGCAGA 1089
||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||| |
Sbjct 1051 -ACGATGCATATATCAAACGGATATCTGTAATCGACGGTTTTAATAACATTGACCGCAAA 1109
Query 1090 GTGGAATATACAGAAAAATAT-GTGGACAACACTCATGGCTACCAAGTTATGGACGACTA 1148
|||| |||||| ||||||| | |||||| | |||| ||||||||||||| | ||||||||
Sbjct 1110 GTGGCATATACCGAAAAAT-TCGTGGACGATACTCGTGGCTACCAAGTTGTAGACGACTA 1168
Query 1149 CAAAAATTCCAA-ATACCCT-AAGGCCGGTCATATAATATTTTTTGGTGGTCCGGGAAAT 1206
|| | |||| |||||| ||| ||||||||||||| |||| ||||||||||| |||
Sbjct 1169 TAATA-TTCCCGCATACCCAGAAG-CCGGTCATATAATCTTTTACGGTGGTCCGGGGAAT 1226
Query 1207 ATCT 1210
||||
Sbjct 1227 ATCT 1230
> AT4G15050.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr4:8588548-8590345 REVERSE LENGTH=1191
Length=1191
Score = 1467 bits (794), Expect = 0.0
Identities = 1072/1204 (89%), Gaps = 27/1204 (2%)
Strand=Plus/Plus
Query 18 AGTGATATGGATGTTCTTAATGTGTTGCATCTTTGGTAACATAATTGTAAGTCATCA-CA 76
||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| | ||
Sbjct 6 AGTGATATGGATGTTCTTAATCTGTTGCATCTTTGGTATCATAATTATAAGTCAT-AGCA 64
Query 77 ATGACTTCGTGGAAGCCAAGAGCTTTTCTAAA-TCTGAAGATTTAGAAATCGAGAAGAGA 135
||||||| || ||||| |||||| |||||||| | |||||||||||||||||||||||||
Sbjct 65 ATGACTTTGTCGAAGCTAAGAGCCTTTCTAAAGT-TGAAGATTTAGAAATCGAGAAGAGA 123
Query 136 CTAAAGACTATCAACAAACCCGCCGTCAAGATCATCAAGACTATAGATGGAGAAAGATAC 195
|||| ||||||||||||||| || |||||||||||||||| |||||||||||||||||||
Sbjct 124 CTAAGGACTATCAACAAACCTGCTGTCAAGATCATCAAGAGTATAGATGGAGAAAGATAC 183
Query 196 GGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCTATGAAGAATCATACA 255
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct 184 GGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCACCCTTCAATGAAGAATCACACA 243
Query 256 TACCATTACAAGATGCGTCCAATATGGAAAGGAATGAGAGAAAGAAAGACAAACAATACC 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 244 TACCATTACAAGATGCGTCCAATATGGAAAGGAATGAGAGAAAGAAAGACAAACAATACC 303
Query 316 GGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATACAA 375
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 304 AATTTTGGTTACCTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATGCAA 363
Query 376 AGAGTCACTAAAGACGATCTTTTGAGATTCGACTCATTTGGCGATAATCATAAACCCCGT 435
|||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||| |||
Sbjct 364 AGAGTCACTAAAGAAGATCTATTGAGATTAGACTCATTTGGCGATAATTATAAACCTCGT 423
Query 436 GGCTCTTGGAA-CACTACCACTTATGATCCTAATAGTCCTCTTCATCCCGACCAACATCA 494
||||||||||| | ||||||| ||||| ||||||| | || || || |||||
Sbjct 424 GGCTCTTGGAATTA-TACCACTGATGATTCTAATAG---T-AACAACCAGA--AACAT-- 474
Query 495 TTATGCGGTGGCTCGGACGTTTGCGC-CAGACAAAAGGTTCAATGGAGCAACAATGGAAC 553
|| |||||||||||||||| ||| || ||||||| ||||||||||||||||||||||| |
Sbjct 475 TT-TGCGGTGGCTCGGACGGTTG-GCTCAGACAAGAGGTTCAATGGAGCAACAATGGATC 532
Query 554 TTTGTATAACCGCTCCTGCGGTTAAACCAACCCAATTCAGTGCTTCTCGACTTCACATTC 613
||||| ||||||||||| ||||| | || ||||| |||||||||||||||||||||||
Sbjct 533 TTTGTTTAACCGCTCCTAAGGTTAGGCTAAACCAATACAGTGCTTCTCGACTTCACATTC 592
Query 614 AGCTTGGAAGTGATTTCATCCAAACCGGTTTTACTGTAAATCCAGA-ATTGTACAAGGAC 672
|| |||||| ||||||| |||||||||| ||||||||||||||| | |||||||||||||
Sbjct 593 AGATTGGAAATGATTTCCTCCAAACCGGCTTTACTGTAAATCCA-ACATTGTACAAGGAC 651
Query 673 AGCCAACCTCGGACTTACGTCTATGCAAATTCAGGTGGTAAATCATGTTACAATAGCAAC 732
|||||||||||||||| ||||||| |||| ||||||| |||||||||||||||||| ||
Sbjct 652 AGCCAACCTCGGACTTTCGTCTATACAAAATCAGGTGAAAAATCATGTTACAATAGCTAC 711
Query 733 TGCGACGTTGGAATGATACTCGTTCGTCAAGATTTTCCACTTGGTTTGGCATTAAAGCCA 792
|||||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||
Sbjct 712 TGCGACGTTGGAATGATACTTGTTCGTCAAGATATTCCACTTGGTATGGCATTATCGCCA 771
Query 793 GTCTCTGTTCGTGGTGCTAAGAAAAGTGAATATGGAATCTTCGGTCTAATCAAGGACGaa 852
|| |||||||||||||||| || || | | |||||| ||||||||||||| |||||| ||
Sbjct 772 GTGTCTGTTCGTGGTGCTAGGACAACTCATTATGGAGTCTTCGGTCTAATTAAGGACCAA 831
Query 853 aaaaaTGGAAATTGGTGGTTGCAATTTGGTGATGCGGCAGAGGAAATTGGATTTTGGCCG 912
| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 832 ATAAATGGAAATTGGTGGTTGCAATTTGGTAATGCTGCAGAGGAAATTGGATTTTGGCCG 891
Query 913 TCGAGTAGGTTTCATCAAAGCTCTGGAAATCTCGTCGAGTGGGGTGGAGAAGTGTACAGC 972
|||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct 892 TCGAGTAGGTTTCATCAAAGCTCTGGAAATTTGGTGGAGTGGGGTGGAGAAGTGTACAGC 951
Query 973 GCCTCACTGCCGAGTCCTGAAATGGGATATGGATATTTTCTTGCTCA-CGATATG-GTTT 1030
|| ||||||||||||||| ||||||||| ||| |||||| ||| | | | ||| | |
Sbjct 952 GCATCACTGCCGAGTCCTCAAATGGGATTTGGGTATTTTGTTGATGGTCAA-ATGCGCT- 1009
Query 1031 ACGATGCATATATCAAACGGATATCCGTACTTGACGGTTTTAATAACATTGACCGCAGAG 1090
||||||||||||||||||||||||| ||| | |||||||||||||| |||||||||| ||
Sbjct 1010 ACGATGCATATATCAAACGGATATCTGTAATCGACGGTTTTAATAAGATTGACCGCAAAG 1069
Query 1091 TGGAATATACAGAAAAATATGTGGACAACACTCATGGCTACCAAGTTATGGACGACTACA 1150
||| |||||| ||||||| ||||||| |||||| ||||||||||||||| ||| | ||||
Sbjct 1070 TGGCATATACCGAAAAATTTGTGGACGACACTCGTGGCTACCAAGTTATAGACAAATACA 1129
Query 1151 AAAATTCCAA-ATACCCTAAGGC-CGGTCATATAATATTTTTTGGTGGTCCGGGAAATAT 1208
| | |||| |||| | || | |||||||||||| |||| ||||||||||| ||| |
Sbjct 1130 ATA-TTCCCGGATACTC-AATACTCGGTCATATAATGTTTTACGGTGGTCCGGGGAATCT 1187
Query 1209 CTGA 1212
||||
Sbjct 1188 CTGA 1191
> AT4G15053.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr4:8591930-8593834 REVERSE LENGTH=1246
Length=1246
Score = 1182 bits (640), Expect = 0.0
Identities = 1042/1232 (85%), Gaps = 44/1232 (4%)
Strand=Plus/Plus
Query 1 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTCTTAATGTGTTGCATCTTTGGTAACATA 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||
Sbjct 35 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTCTTAATGTGTTGCATATTTGGTCACTTA 94
Query 61 ATTGTAAGTCATCACAATGACTTCGTGGAAGCCAAGAGCTTTTCTAAATCTGAAGATTTA 120
|||||||||||| | |||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct 95 ATTGTAAGTCATAAGAATGACTTAGTGGAAGCCAAAAGCTTTTCAAAATCTGAAGATTTG 154
Query 121 GAAATCGAGAAGAGACTAAAGACTATCAACAAACCCGCCGTCAAGATCATCAAGACTATA 180
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||
Sbjct 155 GAAATCGAGAAGAGACTACAGACTATCAACAAACCCGCCGTCAAGAACATCAAGACCATA 214
Query 181 GATGGAGAAAGATACGGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCT 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 GATGGAGAAATATACGGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCT 274
Query 241 ATGAAGAATCATACATACCATTACAAGATGCGTCCAATATGGAAAGGAATGAGAGAAAGA 300
||||||||||| |||||||||||||||||||||| ||| ||||||| |||| ||||||||
Sbjct 275 ATGAAGAATCACACATACCATTACAAGATGCGTCTAATCTGGAAAGAAATGGGAGAAAGA 334
Query 301 AAGACAAACAATACCGGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGT 360
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 335 GAGACAAACAATACTGCTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGT 394
Query 361 ACCGTCCCCATACAAAGAGTCACTAAAGACGATCTTTTGAGATTCGACTCATTTGGCGAT 420
|| ||||| || ||||||||||| |||||||||||||| ||||| ||||||||||| |||
Sbjct 395 ACAGTCCCTATGCAAAGAGTCACCAAAGACGATCTTTTAAGATTAGACTCATTTGGTGAT 454
Query 421 AATCATAAACCCCGTGGCTCTTGGAACACTACCACTTATGATCCTAATAGTCCTCTTCAT 480
|||||||||||| |||| ||||||||||||||||||||||||||||||| | | |||||
Sbjct 455 AATCATAAACCCTGTGGTTCTTGGAACACTACCACTTATGATCCTAATAATGTTGTTCAT 514
Query 481 CCCGACCAACATCATTATGCGGTGGCTCGGACGTTTGCGCCAGACAAA--AGGTTCAATG 538
| ||||||||| || |||||| ||||| ||| | | | | || ||||||||||
Sbjct 515 TACAACCAACATCGTTTTGCGGTAGCTCGAACGAA-GAAC-ATAGGAAGGAGGTTCAATG 572
Query 539 GAGCAACAATGGAACTTTGTATAACCGCTCCTGCGGTTAAACCAACCCAATTCAGTGCTT 598
||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 573 GAGCAACGATGGAACTTTGTATAACCGCTCCTAAGGTTAAGCCAACCCAATTCAGTGCTT 632
Query 599 CTCGACTTCACATTCAGCTTGGAAGTGATTTCATCCAAACCGGTTTTACTGTAAATCCAG 658
| |||||||||||||| | ||||| |||||| ||||| ||||||| |||||||||||||
Sbjct 633 CAAGACTTCACATTCAGATGGGAAGGGATTTCCTCCAAGCCGGTTTGACTGTAAATCCAG 692
Query 659 AATTGTACAAGGACA-GCCAACCTCGGACTTACGTCTATGCAAATTCAGGTGGTAAA-TC 716
|||||||||||||| || ||||||| |||| |||||| || ||||| ||| ||| ||
Sbjct 693 TATTGTACAAGGACAAGC-AACCTCGAACTTTTGTCTATACAGATTCAAATGG-AAACTC 750
Query 717 ATGTTACAATAGCAACTGCGACGTTGGAAT-GATACTCGTTCGTCAAGATTTTCCACTTG 775
||||||||||| ||||||| |||||||||| | |||| ||||||| || || ||||||
Sbjct 751 ATGTTACAATACCAACTGCAACGTTGGAATAG-TACTTATTCGTCATGACATTGCACTTG 809
Query 776 GTTTGGCATTAAAGCCAGTCTCTGTTCGTGGTGCTAAG--AAAAGTGAATATGGAATCTT 833
|| || |||| |||||| ||| |||||||| | | |||| | | ||| || |
Sbjct 810 GTATGTCATTGGTGCCAGTGTCTACTCGTGGTGATTGGCCAAAA-T-ACTATACAAAGAT 867
Query 834 CGGTCTAATCAAGGACGa-aaaaaaTGGAAATTGGTGGTTGCAATTTGGTG--A-TGC-G 888
||||||| ||||||| || ||||||||||||||||||||||||| | |||| | | |
Sbjct 868 CGGTCTAGTCAAGGA-GAGAAAAAATGGAAATTGGTGGTTGCAAATGGGTGGTAATTATG 926
Query 889 -GCAGAGGAAAT-T-GGATTTTGGCCGTCG-AGTAGGTTTCATCAAAGCTCTGGAAATC- 943
|| || |||| | |||||||||||| | | ||||||||| ||||||| |||||||
Sbjct 927 AGCC-AGTAAATATTGGATTTTGGCCGGGGCA-TAGGTTTCAACAAAGCTATGGAAATTA 984
Query 944 TCGTCGAGTGGGGTGGAGAAGTGTACAGCGCCTCACTGCCGAGTCCTGAAATGGGATATG 1003
| |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||
Sbjct 985 T-GTCGAGTGGGGTGGAGAAGTGTACAGGGCATCACTGCCGAGTCCTCAAATGGGATATG 1043
Query 1004 GATATTTTCTTGCTCACGATATGGTTTACGATGCATATATCAAACGGATATCCGTACTTG 1063
||||||||| ||| |||| ||| |||||||||||| ||| |||||| ||| |
Sbjct 1044 GATATTTTCCAATTCAGGATAAAAATTATGATGCATATATCCAACACATATCCATACGCG 1103
Query 1064 ACGGTT-TTAATAACATTGACCGCAGA-GTGGAATATA-CAGAAAAATATGTG-GACAAC 1119
|| ||| ||| |||||| ||||||| | ||||| ||| | ||| | ||| | ||| |
Sbjct 1104 ACCGTTATTA-TAACATAGACCGCA-ATGTGGACTATCTC-GAAGACTAT-TCAGACGAT 1159
Query 1120 ACTC-ATGGCTACCAAGTTATGGACGACTACAAAAATTCCAAATACCCTAAGGCCGGTCA 1178
| || | ||||| ||||| || ||| || | | | | || | ||| || |||||||||
Sbjct 1160 AATCGA-GGCTATCAAGTGATAGAC-ACC-CGAGA-T-CCTA-TACA-TAGGGCCGGTCA 1212
Query 1179 TATAATATTTTTTGGTGGTCCGGGAAATATCT 1210
|||||| |||| ||||||||| ||||||||||
Sbjct 1213 TATAATCTTTTATGGTGGTCCAGGAAATATCT 1244
> AT4G15056.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis
thaliana protein match is: Protein of Unknown Function
(DUF239) (TAIR:AT1G10190.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa
- 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink). | chr4:8595985-8597430
REVERSE LENGTH=678
Length=678
Score = 549 bits (297), Expect = 2e-155
Identities = 339/359 (94%), Gaps = 3/359 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTCTTAATGTGTTGCATCTTTGGTAACATA 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTGTTAATGTGTTGCATCTTTGGTAACATA 60
Query 61 ATTGTAAGTCATCACAATGACTTCGTGGAAGCCAAGAGCTTTTCTAAATCTGAAGATTTA 120
|||| ||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||
Sbjct 61 ATTGGAAGTCATAACAATGATTTTGTGGAAGCCAAGAGCTTTTCTAAATCTAAAGATTTA 120
Query 121 GAAATCGAGAAGAGACTAAAGACTATCAACAAACCCGCCGTCAA-GATCATCAAGACTAT 179
|||||||||||||||||||||||||||||||||||||| ||||| | |||||||||| ||
Sbjct 121 GAAATCGAGAAGAGACTAAAGACTATCAACAAACCCGCAGTCAAAG-TCATCAAGACCAT 179
Query 180 AGATGGAGAAAGATACGGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTC 239
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 180 AGATGGAGAAATATACGGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATACTTC 239
Query 240 TATGAAGAATCATACATACCATTACAAGATGCGTCCAATATGGAAAGGAATGAGAGAAAG 299
|||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||
Sbjct 240 TATGAAGAATCACACATACCATTACAAGATGCTTTCAATCTGGAAAGGAATGAGAGAAAG 299
Query 300 AAAGACAAACAATACCGGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTG 358
| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||
Sbjct 300 AGAGACAAACAATACCGCTTTTGGTTATTTATGGGAGAATGGTGTGGGT-GTCCCATTG 357
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59537846370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5