BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890805
Length=1212
Score E
Sequences producing significant alignments: (Bits) Value
AT1G10190.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1336 0.0
AT4G15050.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1295 0.0
AT4G15053.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1122 0.0
AT4G15056.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 483 2e-135
> AT1G10190.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr1:3343686-3345632 REVERSE LENGTH=1311
Length=1311
Score = 1336 bits (723), Expect = 0.0
Identities = 1052/1207 (87%), Gaps = 37/1207 (3%)
Strand=Plus/Plus
Query 18 AGTGATGTGGATGTTCTTAATGAGTTGCATCTTTGGTCACATAATTACAAGTCATAACAA 77
|||||| ||||||||||||||| |||||||||||||| ||||||||| || |||||||||
Sbjct 47 AGTGATATGGATGTTCTTAATGTGTTGCATCTTTGGTAACATAATTATAAATCATAACAA 106
Query 78 TGTCTTCGTAGAAGCCAAGAGCTTTTCTAAATTTGAAGATTTAGAAATCGAGAAGAGACT 137
|| ||| || ||||| |||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 107 TGACTTTGTTGAAGCTAAGAGCCTTTCTAAAGTTGAAGATTTAGAAATCGAGAAGAGACT 166
Query 138 AAAGTCTATCAACAAACCCGCTGTCAAGATCATCAAGACTATAGATGGAGAAAGATACGG 197
|| | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 167 AAGGACTATCAACAAACCTGCTGTCAAGATCATCAAGAGTATAGATGGAGAAAGATACGG 226
Query 198 ATGTGTGGACTTCTTCAAGCAACCAGCATTTGATCATCCTTCTATGCAA-AATCACACAT 256
||||||||| |||||||||||||||||||||||||| ||||| ||| || ||||||||||
Sbjct 227 ATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCACCCTTCAATG-AAGAATCACACAT 285
Query 257 ACCATTACAAGATGCGTCCGATATGGAAAGGAATGAGAGAAAGAAGGACAAACAATACCG 316
|||||||||||||||| || ||||||||| ||||||||||||||| |||||| ||||||
Sbjct 286 ACCATTACAAGATGCGCCCAATATGGAAAAGAATGAGAGAAAGAAAGACAAATAATACCA 345
Query 317 GTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATACAAA 376
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 ATTTTGGTTACCTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATACAAA 405
Query 377 GAGTCACTAAAGACGATCTTCTGAGATTGGACTCATTTGGCGATAATCATAAACCCCGAG 436
||||||| ||||| |||||| ||||||| |||||||||||||||||||||||||| || |
Sbjct 406 GAGTCACCAAAGAAGATCTTTTGAGATTCGACTCATTTGGCGATAATCATAAACCTCGTG 465
Query 437 GCTCTTGGAACACTACCACTGATAATTCTAATAGTGTCCTCCATAACGACAAACATCATT 496
|||||||||| |||||||||| || ||||||||| | ||| | |||||||||
Sbjct 466 GCTCTTGGAATTTTACCACTGATGATACTAATAGTG------ACAAC--C-AACATCATT 516
Query 497 ATGCGGTGGCTCGGTC-ATTAGACCCAA-CCCAGAGGTTCAATGGAGCAACAATGGAACT 554
|||||||||| || | || | |||| | ||||||||||||||||||| ||||||||
Sbjct 517 TTGCGGTGGCTAGGACGGTT-G-GCCAAGACAAGAGGTTCAATGGAGCAACGATGGAACT 574
Query 555 TTGTATAACCGCTCCTAAGGTTAAGCCAGCCCAATTCAGTGCTTCTCGACTTCACATTCA 614
|||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 575 TTGTTTAACCGCTCCTAAGGTTAGGCCAAACCAATTCAGTGCTTCTCGACTTCACATTCA 634
Query 615 GATTGGAAAG-GATTTCATCCAAACCGGTTTCACCGTAAATCCAGCATTGTACAAGGACA 673
|||||| ||| |||||| ||||||||||||| || ||||||||| ||||||||||||||
Sbjct 635 GATTGG-AAGTGATTTCCTCCAAACCGGTTTTACTGTAAATCCAACATTGTACAAGGAC- 692
Query 674 G-CCAACCCCGGACTTTCGTCTATACAAATTCAGGTGGAAAATCATGTTACAATAGCAAC 732
| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 693 GACCAACCTCGGACTTTCGTCTATACAAATTCAGGTGGAAAATCATGTTACAATAATGAC 752
Query 733 TGCAACGTTGGGATGTTACTCGTTCGTCAAGATTTCCCA-CTTGGTACGGCGTTGTTGCC 791
||| |||| || ||| ||||||||||||||||||| | | ||||||| ||| || |||||
Sbjct 753 TGCGACGTAGGAATGATACTCGTTCGTCAAGATTTTC-ATCTTGGTATGGCATTATTGCC 811
Query 792 AGTGTCTATCCGCGGTGCTAAGATAAGTCACTATGGAATCTTCGGTCTAATCAAGGACGa 851
||||||| | || |||||||||| || ||| |||| |||||||||||||||||||||| |
Sbjct 812 AGTGTCTGTTCGTGGTGCTAAGACAACTCATTATGCAATCTTCGGTCTAATCAAGGACCA 871
Query 852 aaaaaaTGGAAACTGGTGGTTGCAATTTGGTGATAATGCGGAAGAAGTTGGATTTTGGCC 911
|| ||||||||| |||||||||||||||||| || ||| || |||||||||||||||||
Sbjct 872 AATAAATGGAAATTGGTGGTTGCAATTTGGTAATGCTGCAGAGGAAGTTGGATTTTGGCC 931
Query 912 GTCGAGTAGGTTTCATCAAAGCTCTGGAAATTACGTCGAGTGGGGCGGAGAAGTGTACAG 971
||||||||| |||||||||||||||||||||| || |||||||| ||||||| ||| ||
Sbjct 932 GTCGAGTAGATTTCATCAAAGCTCTGGAAATTTGGTGGAGTGGGGTGGAGAAGCGTATAG 991
Query 972 TGCAT-ACCTGCCGAGTCCTGAAATGGGATATGGACATTATCCTGTTG--AGGATATGCG 1028
||||| || |||||||||| |||||||||||||| ||| || || || || ||||||
Sbjct 992 TGCATCACA-GCCGAGTCCTCAAATGGGATATGGATATTTTCTTGATGCTAG--TATGCG 1048
Query 1029 TTACGATGCATATATCAAACGTATAACCGTACTCGACGGTTTTAATTACATTGACCGCAG 1088
|||||||||||||||||||| ||| | ||| |||||||||||||| ||||||||||||
Sbjct 1049 CTACGATGCATATATCAAACGGATATCTGTAATCGACGGTTTTAATAACATTGACCGCAA 1108
Query 1089 AGTGGCATAT-CTCGAAGAATTCGCGGAC-A-ACGATCGGGGCTACACA-GTAATTGACG 1144
|||||||||| | |||| |||||| |||| | || ||| |||||| || || | ||||
Sbjct 1109 AGTGGCATATAC-CGAAAAATTCGTGGACGATAC--TCGTGGCTAC-CAAGTTGTAGACG 1164
Query 1145 ACTACAGCACTCACAAATACCCT-AAGGCCGGTCATATAATCTTTTTTGGTGGTCCGGGA 1203
|||| | | || | |||||| ||| |||||||||||||||||| |||||||||||
Sbjct 1165 ACTATAATATTCCCGCATACCCAGAAG-CCGGTCATATAATCTTTTACGGTGGTCCGGGG 1223
Query 1204 AATATCT 1210
|||||||
Sbjct 1224 AATATCT 1230
> AT4G15050.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr4:8588548-8590345 REVERSE LENGTH=1191
Length=1191
Score = 1295 bits (701), Expect = 0.0
Identities = 1048/1211 (87%), Gaps = 41/1211 (3%)
Strand=Plus/Plus
Query 18 AGTGATGTGGATGTTCTTAATGAGTTGCATCTTTGGTCA-CATAATTACAAGTCATAACA 76
|||||| |||||||||||||| |||||||||||||| | |||||||| |||||||| ||
Sbjct 6 AGTGATATGGATGTTCTTAATCTGTTGCATCTTTGGT-ATCATAATTATAAGTCATAGCA 64
Query 77 ATGTCTTCGTAGAAGCCAAGAGCTTTTCTAAATTTGAAGATTTAGAAATCGAGAAGAGAC 136
||| ||| || ||||| |||||| |||||||| |||||||||||||||||||||||||||
Sbjct 65 ATGACTTTGTCGAAGCTAAGAGCCTTTCTAAAGTTGAAGATTTAGAAATCGAGAAGAGAC 124
Query 137 TAAAGTCTATCAACAAACCCGCTGTCAAGATCATCAAGACTATAGATGGAGAAAGATACG 196
||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 125 TAAGGACTATCAACAAACCTGCTGTCAAGATCATCAAGAGTATAGATGGAGAAAGATACG 184
Query 197 GATGTGTGGACTTCTTCAAGCAACCAGCATTTGATCATCCTTCTATGCAA-AATCACACA 255
|||||||||| |||||||||||||||||||||||||| ||||| ||| || |||||||||
Sbjct 185 GATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCACCCTTCAATG-AAGAATCACACA 243
Query 256 TACCATTACAAGATGCGTCCGATATGGAAAGGAATGAGAGAAAGAAGGACAAACAATACC 315
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 244 TACCATTACAAGATGCGTCCAATATGGAAAGGAATGAGAGAAAGAAAGACAAACAATACC 303
Query 316 GGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATACAA 375
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 304 AATTTTGGTTACCTATGGGAGAATGGTGTGGGTTGTCCCATTGGTACCGTCCCCATGCAA 363
Query 376 AGAGTCACTAAAGACGATCT-TCTGAGATTGGACTCATTTGGCGATAATCATAAACCCCG 434
|||||||||||||| ||||| | ||||||| |||||||||||||||||| ||||||| ||
Sbjct 364 AGAGTCACTAAAGAAGATCTAT-TGAGATTAGACTCATTTGGCGATAATTATAAACCTCG 422
Query 435 AGGCTCTTGGAA-CACTACCACTGATAATTCTAATAGTGTCCTCCATAACGACAAACATC 493
||||||||||| | |||||||||| ||||||||| | | | ||| | ||||||
Sbjct 423 TGGCTCTTGGAATTA-TACCACTGATGATTCTAATA--G---T-AACAACCAGAAACAT- 474
Query 494 ATTATGCGGTGGCTCGGTC-ATTAGACCCA-ACCCAGAGGTTCAATGGAGCAACAATGGA 551
|| ||||||||||||| | || | | || | | |||||||||||||||||||||||||
Sbjct 475 -TT-TGCGGTGGCTCGGACGGTT-GGCTCAGA-CAAGAGGTTCAATGGAGCAACAATGGA 530
Query 552 ACTTTGTATAACCGCTCCTAAGGTTAAGCCAGCCCAATTCAGTGCTTCTCGACTTCACAT 611
|||||| |||||||||||||||||| || | ||||| |||||||||||||||||||||
Sbjct 531 TCTTTGTTTAACCGCTCCTAAGGTTAGGCTAAACCAATACAGTGCTTCTCGACTTCACAT 590
Query 612 TCAGATTGGAAAGGATTTCATCCAAACCGG-TTTCACCGTAAATCCAGCATTGTACAAGG 670
|||||||||||| |||||| |||||||||| ||| || ||||||||| ||||||||||||
Sbjct 591 TCAGATTGGAAATGATTTCCTCCAAACCGGCTTT-ACTGTAAATCCAACATTGTACAAGG 649
Query 671 ACAGCCAACCCCGGACTTTCGTCTATACAAATTCAGGTGGAAAATCATGTTACAATAGCA 730
|||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 650 ACAGCCAACCTCGGACTTTCGTCTATACAAAATCAGGTGAAAAATCATGTTACAATAGCT 709
Query 731 ACTGCAACGTTGGGATGTTACTCGTTCGTCAAGAT-TTCCCACTTGGTACGGCGTTGTTG 789
||||| ||||||| ||| |||| |||||||||||| || |||||||||| ||| || | |
Sbjct 710 ACTGCGACGTTGGAATGATACTTGTTCGTCAAGATATT-CCACTTGGTATGGCATTATCG 768
Query 790 CCAGTGTCTATCCGCGGTGCTAAGATAAGTCACTATGGAATCTTCGGTCTAATCAAGGAC 849
||||||||| | || ||||||| || || ||| |||||| ||||||||||||| ||||||
Sbjct 769 CCAGTGTCTGTTCGTGGTGCTAGGACAACTCATTATGGAGTCTTCGGTCTAATTAAGGAC 828
Query 850 GaaaaaaaTGGAAACTGGTGGTTGCAATTTGGTGATAATGCGGAAGAAGTTGGATTTTGG 909
||| ||||||||| |||||||||||||||||| || ||| || ||| |||||||||||
Sbjct 829 CAAATAAATGGAAATTGGTGGTTGCAATTTGGTAATGCTGCAGAGGAAATTGGATTTTGG 888
Query 910 CCGTCGAGTAGGTTTCATCAAAGCTCTGGAAATTACGTCGAGTGGGGCGGAGAAGTGTAC 969
|||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct 889 CCGTCGAGTAGGTTTCATCAAAGCTCTGGAAATTTGGTGGAGTGGGGTGGAGAAGTGTAC 948
Query 970 AGTGCAT-ACCTGCCGAGTCCTGAAATGGGATATGGACATTATCCTGTTGA-GG--ATAT 1025
|| |||| || ||||||||||| ||||||||| ||| ||| | |||||| || | ||
Sbjct 949 AGCGCATCAC-TGCCGAGTCCTCAAATGGGATTTGGGTATT-T--TGTTGATGGTCAAAT 1004
Query 1026 GCGTTACGATGCATATATCAAACGTATAACCGTACTCGACGGTTTTAATTACATTGACCG 1085
||| |||||||||||||||||||| ||| | ||| |||||||||||||| | ||||||||
Sbjct 1005 GCGCTACGATGCATATATCAAACGGATATCTGTAATCGACGGTTTTAATAAGATTGACCG 1064
Query 1086 CAGAGTGGCATAT-CTCGAAGAATTCGCGGACAACGA-TCGGGGCTACACA-GTAATTGA 1142
|| |||||||||| | |||| |||| | |||| || | ||| |||||| || || || ||
Sbjct 1065 CAAAGTGGCATATAC-CGAAAAATTTGTGGACGAC-ACTCGTGGCTAC-CAAGTTATAGA 1121
Query 1143 CGACTACAGCACTCACAAATACCCTAAGGC-CGGTCATATAATCTTTTTTGGTGGTCCGG 1201
| | |||| | || | |||| | || | |||||||||||| |||| ||||||||||
Sbjct 1122 CAAATACAATATTCCCGGATACTC-AATACTCGGTCATATAATGTTTTACGGTGGTCCGG 1180
Query 1202 GAAATATCTGA 1212
| ||| |||||
Sbjct 1181 GGAATCTCTGA 1191
> AT4G15053.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr4:8591930-8593834 REVERSE LENGTH=1246
Length=1246
Score = 1122 bits (607), Expect = 0.0
Identities = 1036/1237 (84%), Gaps = 54/1237 (4%)
Strand=Plus/Plus
Query 1 ATGGAAGTGAGAGGTCCAGTGATGTGGATGTTCTTAATGAGTTGCATCTTTGGTCACATA 60
|||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||| ||
Sbjct 35 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTCTTAATGTGTTGCATATTTGGTCACTTA 94
Query 61 ATTACAAGTCATAACAATGTCTTCGTAGAAGCCAAGAGCTTTTCTAAATTTGAAGATTTA 120
||| ||||||||| |||| ||| || |||||||| |||||||| |||| |||||||||
Sbjct 95 ATTGTAAGTCATAAGAATGACTTAGTGGAAGCCAAAAGCTTTTCAAAATCTGAAGATTTG 154
Query 121 GAAATCGAGAAGAGACTAAAGTCTATCAACAAACCCGCTGTCAAGATCATCAAGACTATA 180
|||||||||||||||||| || |||||||||||||||| ||||||| ||||||||| |||
Sbjct 155 GAAATCGAGAAGAGACTACAGACTATCAACAAACCCGCCGTCAAGAACATCAAGACCATA 214
Query 181 GATGGAGAAAGATACGGATGTGTGGACTTCTTCAAGCAACCAGCATTTGATCATCCTTCT 240
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 215 GATGGAGAAATATACGGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATCCTTCT 274
Query 241 ATGCAA-AATCACACATACCATTACAAGATGCGTCCGATATGGAAAGGAATGAGAGAAAG 299
||| || |||||||||||||||||||||||||||| || ||||||| |||| |||||||
Sbjct 275 ATG-AAGAATCACACATACCATTACAAGATGCGTCTAATCTGGAAAGAAATGGGAGAAAG 333
Query 300 AAG-GACAAACAATACCGGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTG 358
|| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 334 -AGAGACAAACAATACTGCTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCATTG 392
Query 359 GTACCGTCCCCATACAAAGAGTCACTAAAGACGATCTTCTGAGATTGGACTCATTTGGCG 418
|||| ||||| || ||||||||||| |||||||||||| | ||||| ||||||||||| |
Sbjct 393 GTACAGTCCCTATGCAAAGAGTCACCAAAGACGATCTTTTAAGATTAGACTCATTTGGTG 452
Query 419 ATAATCATAAACCCCGAGGCTCTTGGAACACTACCACTGATAATTCTAATAGTGTCCTCC 478
|||||||||||||| | || |||||||||||||||||| || || |||||| ||| | |
Sbjct 453 ATAATCATAAACCCTGTGGTTCTTGGAACACTACCACTTATGATCCTAATAATGTTGTTC 512
Query 479 ATAACGACAAACATCATTATGCGGTGGCTCGGTC-ATTAGACCCA-ACCCAG-AGGTTCA 535
|| || || |||||| || |||||| ||||| | | ||| | | | || |||||||
Sbjct 513 ATTACAACCAACATCGTTTTGCGGTAGCTCGAACGA--AGAAC-ATAGGAAGGAGGTTCA 569
Query 536 ATGGAGCAACAATGGAACTTTGTATAACCGCTCCTAAGGTTAAGCCAGCCCAATTCAGTG 595
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 570 ATGGAGCAACGATGGAACTTTGTATAACCGCTCCTAAGGTTAAGCCAACCCAATTCAGTG 629
Query 596 CTTCTCGACTTCACATTCAGATTGGAAAGGATTTCATCCAAACCGGTTTCACCGTAAATC 655
|||| |||||||||||||||| |||| ||||||| ||||| ||||||| || |||||||
Sbjct 630 CTTCAAGACTTCACATTCAGATGGGAAGGGATTTCCTCCAAGCCGGTTTGACTGTAAATC 689
Query 656 CAGCATTGTACAAGGACA-GCCAACCCCGGACTTTCGTCTATACAAATTCAGGTGGAAAA 714
||| |||||||||||||| || |||| || ||||| ||||||||| ||||| ||||||
Sbjct 690 CAGTATTGTACAAGGACAAGC-AACCTCGAACTTTTGTCTATACAGATTCAAATGGAAAC 748
Query 715 TCATGTTACAATAGCAACTGCAACGTTGGGAT-GTTACTCGTTCGTCAAGAT-TTCCCAC 772
||||||||||||| ||||||||||||||| || || ||| ||||||| || || | ||
Sbjct 749 TCATGTTACAATACCAACTGCAACGTTGGAATAGT-ACTTATTCGTCATGACATTGC-AC 806
Query 773 TTGGTACGGCGTTGTTGCCAGTGTCTA-TCCGCGGTGCTAAG--ATAAGTCACTATGGAA 829
|||||| | | ||| |||||||||||| || | |||| | | | || | ||||| ||
Sbjct 807 TTGGTATGTCATTGGTGCCAGTGTCTACTC-GTGGTGATTGGCCAAAA-T-ACTATACAA 863
Query 830 TCTTCGGTCTAATCAAGGACGa-aaaaaaTGGAAACTGGTGGTTGCAATTTGGTGATAAT 888
|||||||| ||||||| || |||||||||||| |||||||||||| | |||| ||||
Sbjct 864 AGATCGGTCTAGTCAAGGA-GAGAAAAAATGGAAATTGGTGGTTGCAAATGGGTGGTAAT 922
Query 889 GCGGA---AG-AAGT-T-GGATTTTGGCCGTCG-AGTAGGTTTCATCAAAGCTCTGGAAA 941
|| || || | | |||||||||||| | | ||||||||| ||||||| ||||||
Sbjct 923 TATGAGCCAGTAAATATTGGATTTTGGCCGGGGCA-TAGGTTTCAACAAAGCTATGGAAA 981
Query 942 TTACGTCGAGTGGGGCGGAGAAGTGTACAGTGCAT-ACCTGCCGAGTCCTGAAATGGGAT 1000
||| ||||||||||| |||||||||||||| |||| || ||||||||||| |||||||||
Sbjct 982 TTATGTCGAGTGGGGTGGAGAAGTGTACAGGGCATCAC-TGCCGAGTCCTCAAATGGGAT 1040
Query 1001 ATGGACATTATCCTGTTGAGGATATGCGTTACGATGCATATATCAAACGTATAACCGTAC 1060
||||| ||| ||| || |||||| ||| |||||||||||| ||| ||| || |||
Sbjct 1041 ATGGATATTTTCCAATTCAGGATAAAAATTATGATGCATATATCCAACACATATCCATAC 1100
Query 1061 TCGACGGTT-TTAATTACATTGACCGCAGA-GTGG-CATATCTCGAAGA--ATTCGCGGA 1115
|||| ||| ||| | |||| ||||||| | |||| | ||||||||||| |||| | |
Sbjct 1101 GCGACCGTTATTA-TAACATAGACCGCA-ATGTGGAC-TATCTCGAAGACTATTCA-G-A 1155
Query 1116 CAACGATCGGGGCTA-CACAGTAATTGACGACTAC-AGCACTCACAAATACCCTAAGGCC 1173
| | |||| ||||| || ||| || ||| || | || | || | | ||| || ||||
Sbjct 1156 CGATAATCGAGGCTATCA-AGTGATAGAC-ACC-CGAG-A-TC-CTA-TACA-TAGGGCC 1207
Query 1174 GGTCATATAATCTTTTTTGGTGGTCCGGGAAATATCT 1210
|||||||||||||||| ||||||||| ||||||||||
Sbjct 1208 GGTCATATAATCTTTTATGGTGGTCCAGGAAATATCT 1244
> AT4G15056.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF239, plant (InterPro:IPR004314); BEST Arabidopsis
thaliana protein match is: Protein of Unknown Function
(DUF239) (TAIR:AT1G10190.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa
- 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink). | chr4:8595985-8597430
REVERSE LENGTH=678
Length=678
Score = 483 bits (261), Expect = 2e-135
Identities = 330/362 (91%), Gaps = 9/362 (2%)
Strand=Plus/Plus
Query 1 ATGGAAGTGAGAGGTCCAGTGATGTGGATGTTCTTAATGAGTTGCATCTTTGGTCACATA 60
|||||||||||||| |||||||| |||||||| |||||| |||||||||||||| |||||
Sbjct 1 ATGGAAGTGAGAGGCCCAGTGATATGGATGTTGTTAATGTGTTGCATCTTTGGTAACATA 60
Query 61 ATTACAAGTCATAACAATG-TCTTCGTAGAAGCCAAGAGCTTTTCTAAATTTGAAGATTT 119
||| |||||||||||||| | || || |||||||||||||||||||||| | |||||||
Sbjct 61 ATTGGAAGTCATAACAATGAT-TTTGTGGAAGCCAAGAGCTTTTCTAAATCTAAAGATTT 119
Query 120 AGAAATCGAGAAGAGACTAAAGTCTATCAACAAACCCGCTGTCAA-GATCATCAAGACTA 178
|||||||||||||||||||||| |||||||||||||||| ||||| | |||||||||| |
Sbjct 120 AGAAATCGAGAAGAGACTAAAGACTATCAACAAACCCGCAGTCAAAG-TCATCAAGACCA 178
Query 179 TAGATGGAGAAAGATACGGATGTGTGGACTTCTTCAAGCAACCAGCATTTGATCATCCTT 238
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 179 TAGATGGAGAAATATACGGATGTGTGGATTTCTTCAAGCAACCAGCATTTGATCATACTT 238
Query 239 CTATGCAA-AATCACACATACCATTACAAGATGCGTCCGATATGGAAAGGAATGAGAGAA 297
||||| || ||||||||||||||||||||||||| | | || ||||||||||||||||||
Sbjct 239 CTATG-AAGAATCACACATACCATTACAAGATGCTTTCAATCTGGAAAGGAATGAGAGAA 297
Query 298 AGA-AGGACAAACAATACCGGTTTTGGTTACTTATGGGAGAATGGTGTGGGTTGTCCCAT 356
||| || ||||||||||||| ||||||||| ||||||||||||||||||||| |||||||
Sbjct 298 AGAGAG-ACAAACAATACCGCTTTTGGTTATTTATGGGAGAATGGTGTGGGT-GTCCCAT 355
Query 357 TG 358
||
Sbjct 356 TG 357
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59537846370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5