BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg890810 Length=213 Score E Sequences producing significant alignments: (Bits) Value AT4G15020.1 | Symbols: | hAT transposon superfamily | chr4:857... 241 2e-63 > AT4G15020.1 | Symbols: | hAT transposon superfamily | chr4:8575409-8578688 FORWARD LENGTH=3020 Length=3020 Score = 241 bits (130), Expect = 2e-63 Identities = 154/166 (93%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 48 ACGGGCCGGGTCGATTTCTCCGACATTGCAATCCTCCATCCTCCTCTGATTCCCTCCGCC 107 |||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||| Sbjct 4 ACGGGCCGGGTCGATTTCTCCGCCATCGCAATCCTCCACCCTCCTCTGATTCTCTCCGCC 63 Query 108 GTTAGTCGGAAATCTCCATCTCCGGTTGATTCCAGCTTCCTCTTCTCCAGAACCGAAGCA 167 ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 64 GTTCGTCGGAAATCTCCATCTCCGGCTGATTCCAGCTTCCTCTTCTCCAGAACCGAAGCT 123 Query 168 ATTCTACCGGAATTTCATCACTTTCCCCGAAACCGATTCTTCGTAA 213 | | ||||||||||| ||||||||||||||||||||||| ||||| Sbjct 124 ACTGTACCGGAATTTTATCACTTTCCCCGAAACCGATTCACCGTAA 169 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9500604561 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5