BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg890875
Length=669
Score E
Sequences producing significant alignments: (Bits) Value
AT4G14630.1 | Symbols: GLP9 | germin-like protein 9 | chr4:8392... 1020 0.0
AT5G38940.1 | Symbols: | RmlC-like cupins superfamily protein ... 449 1e-125
AT5G38930.1 | Symbols: | RmlC-like cupins superfamily protein ... 422 3e-117
AT5G38910.1 | Symbols: | RmlC-like cupins superfamily protein ... 327 6e-89
AT1G09560.1 | Symbols: GLP5 | germin-like protein 5 | chr1:3093... 63.9 2e-09
> AT4G14630.1 | Symbols: GLP9 | germin-like protein 9 | chr4:8392841-8393813
FORWARD LENGTH=881
Length=881
Score = 1020 bits (552), Expect = 0.0
Identities = 632/671 (94%), Gaps = 4/671 (1%)
Strand=Plus/Plus
Query 1 ATGGCGATGAAAAGTCTCTCCTTTCTTGCAGCTCTATCTCTCTTGGCTTTGACATTTCCA 60
||| |||| ||||||||||| |||||||| |||||||||||||| ||||||||| |||||
Sbjct 80 ATGACGATAAAAAGTCTCTCTTTTCTTGCGGCTCTATCTCTCTTTGCTTTGACACTTCCA 139
Query 61 TTAGTCTTTGCTTCCGATCCAAGCCCCCTTCAAGA-TTTCTGTGTCGGCGTTAACACACC 119
||||| |||||||||||||||||||||||||||| ||| ||||| || || ||||||||
Sbjct 140 TTAGTAATTGCTTCCGATCCAAGCCCCCTTCAAGACTTT-TGTGTTGGTGTCAACACACC 198
Query 120 AGTAGATGGCGTGTTTGTGAATGGAAAATTCTGCAAGGATCCAAGGATTGTTTCCGCGGA 179
|| |||||||||||||||||||||||| || ||||||||||||||||| |||| ||||||
Sbjct 199 AGCAGATGGCGTGTTTGTGAATGGAAAGTTTTGCAAGGATCCAAGGATAGTTTTCGCGGA 258
Query 180 TGATTTCTTTTTCTCTG-GACTCAACAGAGCTGGAAATACAAATAACGCGGTTGGGTCCA 238
||||||||||||||| | | ||||||||| ||||||||||||||||||||||||||||||
Sbjct 259 TGATTTCTTTTTCTC-GAGCCTCAACAGACCTGGAAATACAAATAACGCGGTTGGGTCCA 317
Query 239 ACGTGACAACCGTCAATGTTAACAACCTCGGAGGATTAAACACCCTTGGAATCTCACTAG 298
|||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||| |
Sbjct 318 ACGTGACAACCGTCAATGTTAACAACCTTGGAGGACTAAACACTCTTGGTATCTCACTTG 377
Query 299 TTCGTATAGACTATGCACCCAACGGTCAGAACCCACCTCACACCCACCCACGTGCCACCG 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 378 TTCGTATAGACTATGCACCCAACGGTCAGAACCCACCTCACACCCACCCACGTGCCACCG 437
Query 359 AGATCTTGGTTGTCCAACAAGGAACTCTACTCGTAGGGTTTATCTCATCAAACCAAGACG 418
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 438 AGATCTTGGTTGTTCAACAAGGAACTCTACTTGTAGGGTTTATCTCATCAAACCAAGACG 497
Query 419 GAAACCGTCTTTTCGCCAAAACGCTCAACGTGGGTGATGTATTTGTGTTTCCAGAAGGAC 478
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 498 GAAACCGTCTTTTCGCCAAAACACTCAACGTGGGTGACGTATTTGTGTTTCCAGAAGGAC 557
Query 479 TCATCCATTTCCAGTTCAACCTAGGAGGAATTCCAGCGGTAGCAATCGCTGCTTTGAGCA 538
|||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct 558 TCATCCATTTCCAGTTCAACCTAGGAGGAACTCCAGCAGTTGCAATCGCTGCTTTGAGCA 617
Query 539 GCCAAAACGCAGGTGTTATCACGATTGCTAACACAATATTTGGGTCTAAACCAGATATAG 598
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 618 GCCAAAACGCAGGTGTTATCACAATTGCTAACACAATATTTGGGTCTAAACCAGATGTAG 677
Query 599 ACCCGAATGTTCTTGCAAGGGCATTCCAAATGGATCCTAATGCGGTCAGGAATTTACAAG 658
||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 678 ACCCGAATGTTCTTGCAAGAGCATTCCAAATGGATGTTAATGCGGTCAGGAATTTACAAG 737
Query 659 CCAGGTTCTAA 669
|||||||||||
Sbjct 738 CCAGGTTCTAA 748
> AT5G38940.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15588757-15589666 FORWARD LENGTH=826
Length=826
Score = 449 bits (243), Expect = 1e-125
Identities = 517/644 (80%), Gaps = 39/644 (6%)
Strand=Plus/Plus
Query 1 ATGGCGATGAAAAGTCTCTCCTTTCTTGCAGCT-CTATCTCTCTTGGCTTTGACATTTCC 59
||||| ||||| |||||||| |||||||||| | || |||||||||||||| ||| ||||
Sbjct 15 ATGGCAATGAAGAGTCTCTCATTTCTTGCAG-TGCTCTCTCTCTTGGCTTTAACACTTCC 73
Query 60 ATTAGTCTTTGCTTCCGATCCAAGCCCCCTTCAAGA-TTTCTGTGTCGGCGTTAACACAC 118
||||| | ||||||| |||||||||| |||||||| ||| |||||| ||| ||||| |
Sbjct 74 ATTAGCCATTGCTTCTGATCCAAGCCAACTTCAAGACTTT-TGTGTCAGCGCCAACAC-C 131
Query 119 -CAG-TAGATGGCGTGTTTGTGAATGGAAAATTCTGCAAGGATCCAAGGATTGTTTCCGC 176
||| | ||||||| ||||| |||||||| ||||||||||| |||| | | || | ||
Sbjct 132 TCAGCCA-ATGGCGTTTTTGTTAATGGAAAGTTCTGCAAGGACCCAAAGCTGGTCACAGC 190
Query 177 GGATGATTTCTTTTTCTCTGGAC-TCAACAGAGCTGGAAATACAAATAAC--G--CGGTT 231
||||| ||||||||||| || | || | | | || | || || || || | | |||
Sbjct 191 AGATGACTTCTTTTTCTCAGGGCTTC-A-A-A-CT-GCAAGACCCATTACTAGTCCCGTT 245
Query 232 GGGTCCAACGTGACAACCGTCAATGTTAACAACC-TCGGAGGATTAAACACCCTTGGAAT 290
||||| | ||||||| |||||||||||||||||| || ||||||||||| ||||||||
Sbjct 246 GGGTCGACCGTGACAGCCGTCAATGTTAACAACCTTC-TTGGATTAAACACTCTTGGAAT 304
Query 291 CTCACTAGTTCGTATAGACTATGCACCCAACGGTCAGAACCCACCTCACACCCACCCACG 350
||| || || ||||| || ||||| ||||| ||||||||||||||||||||||||||
Sbjct 305 CTCCCTTGTCCGTATTGATTATGCGGTTAACGGACAGAACCCACCTCACACCCACCCACG 364
Query 351 TGCCACCGAGATCTTGGTTGTCCAACAAGGAACTCTACTCGTAGGGTTTATCTCATCAAA 410
|||||| ||||||||||||||| |||||||||| || |||||||||||| || |||||||
Sbjct 365 TGCCACAGAGATCTTGGTTGTCGAACAAGGAACACTTCTCGTAGGGTTTGTCACATCAAA 424
Query 411 CCAAGACGGA-AACCGTCTTTTCGCCAAAACG--CTCAACGTGGGTGATGTATTTGTGTT 467
|| |||| || || || ||| | |||| | ||||||| ||||||||||||||||||
Sbjct 425 CC----CGGATAATCGCCTATTCTC-AAAA-GTTCTCAACGAGGGTGATGTATTTGTGTT 478
Query 468 TCCAGAAGGACTCATCCATTTCCA-GTTCAACC-TAGG-A-GGAATTCCAGCGGTAGCAA 523
||| || |||||||||||||| || | ||| | | || | || | |||||||| |||
Sbjct 479 TCCCGAGGGACTCATCCATTTTCAAG--CAAACATTGGCAAGGCA--CCAGCGGTTGCAT 534
Query 524 TCGCTGCTTTGAGCAGCCAAAACGCAGGTGTTATCACGATTGCTAACACAATATTTGGGT 583
|||| ||| | |||||||||||| | ||||| ||||| ||||| ||||| | ||||||
Sbjct 535 TCGCCGCTCTAAGCAGCCAAAACCCTGGTGTCATCACTATTGCCAACACCGTGTTTGGGG 594
Query 584 CTAAACCAGATATAGACCCGAA-TGTTCTTGCAAGGGCATTCCA 626
|||| |||| ||| |||| || | ||||||||| |||||||||
Sbjct 595 CTAACCCAGCCATAAACCC-AACTATTCTTGCAAAGGCATTCCA 637
> AT5G38930.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15585073-15585841 FORWARD LENGTH=672
Length=672
Score = 422 bits (228), Expect = 3e-117
Identities = 509/641 (79%), Gaps = 33/641 (5%)
Strand=Plus/Plus
Query 1 ATGGCGATGAAAAGTCTCTCCTTTCTTGCAGCTCTATCTCTCTTGGCTTTGACATTTCCA 60
||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||
Sbjct 1 ATGGCAATGAAGAGTCTCTCATTTCTTGCAGCTCTATCTCTCTTGGCTTTAACACTTCCA 60
Query 61 TTAGTCTTTGCTTCCGATCCAAGCCCCCTTCAAGA-TTTCTGTGTCGGCGTTAACACAC- 118
||| | ||||||| |||||||||| |||||||| ||| |||||| ||| |||| |
Sbjct 61 TTAACCATTGCTTCTGATCCAAGCCAACTTCAAGACTTT-TGTGTCAGCGCCAACA-GCT 118
Query 119 CAGTAGATGGCGTGTTTGTGAATGGAAAATTCTGCAAGGATCCAAGGATTGTTTCCGCGG 178
||| | ||||||| ||||| |||||||| ||||||||||| |||| | | || | || |
Sbjct 119 CAGCAAATGGCGTTTTTGTTAATGGAAAGTTCTGCAAGGACCCAAAGCTGGTCACAGCAG 178
Query 179 ATGATTTCTTTTTCTCTGGAC-TCAACAGAGCTGGAAATACAAATAAC--G--CGGTTGG 233
|||| ||||||||| | || | || | | | || | || || ||||| | | |||||
Sbjct 179 ATGACTTCTTTTTCCCAGGGCTTC-A-A-A-CT-GCAAGACCCATAACAAGTCCTGTTGG 233
Query 234 GTCCAACGTGACAACCGTCAATGTTAACAACC-TCGGAGGATTAAACACCCTTGGAATCT 292
||| | ||||||| |||||||||||||||||| || || |||||||| ||||||||||
Sbjct 234 GTCGACCGTGACAGCCGTCAATGTTAACAACCTTC-TTGGGTTAAACACTCTTGGAATCT 292
Query 293 CACTAGTTCGTATAGACTATGCACCCAACGGTCAGAACCCACCTCACACCCACCCACGTG 352
| || || ||||| || ||||| |||| ||||||||||||||||||||||||||||
Sbjct 293 CCCTTGTCCGTATTGATTATGCGGTTGACGGACAGAACCCACCTCACACCCACCCACGTG 352
Query 353 CCACCGAGATCTTGGTTGTCCAACAAGGAACTCTACTCGTAGGGTTTATCT-CATCAAAC 411
|||| ||||||||||||||| ||| |||||| || |||||||||||| | | ||||||||
Sbjct 353 CCACGGAGATCTTGGTTGTCGAACTAGGAACACTTCTCGTAGGGTTTGT-TACATCAAAC 411
Query 412 CAAGACGGAAACCGTCTTTTCGCCAAAACGCTCAACGTGGGTGATGTATTTGTGTTTCCA 471
| || || | | || ||| | ||| ||||||| ||||||||||||||||||||||
Sbjct 412 CCCGAT--AATC-GCCTATTCACTAAAGTTCTCAACGAGGGTGATGTATTTGTGTTTCCA 468
Query 472 GAAGGACTCATCCATTTCCA-GTTCAACC-TAGG-A-GGAATTCCAGCGGTAGCAATCGC 527
|| |||||||||||||| || | ||| | | || | || | |||||||| ||| ||||
Sbjct 469 GAGGGACTCATCCATTTTCAAG--CAAACATTGGCAAGGCA--CCAGCGGTTGCATTCGC 524
Query 528 TGCTTTGAGCAGCCAAAACGCAGGTGTTATCACGATTGCTAACA-CAATATTTGGGTCTA 586
||| | |||||||||||| | ||||| ||||| ||||| | || | | |||||| |||
Sbjct 525 CGCTCTAAGCAGCCAAAACCCTGGTGTCATCACTATTGC-ACCAACCGTGTTTGGGGCTA 583
Query 587 AACCAGATAT-AGACCCGAATGTTCTTGCAAGGGCATTCCA 626
| |||| || | |||| ||| ||||||||| ||| |||||
Sbjct 584 ACCCAGCCATCA-ACCCAAATATTCTTGCAAAGGCGTTCCA 623
> AT5G38910.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15578811-15579584 FORWARD LENGTH=669
Length=669
Score = 327 bits (177), Expect = 6e-89
Identities = 491/638 (77%), Gaps = 39/638 (6%)
Strand=Plus/Plus
Query 7 ATGAAAAGTCTCTCCTTTCTTGCAGCTCTATCTCTCTTGGCTTTGACA-TTTCCATT-AG 64
||||||||| |||| |||||||||| | ||||| ||||||| | ||| ||| |||| ||
Sbjct 1 ATGAAAAGTTTCTCATTTCTTGCAGTTTTATCTATCTTGGCAATAACACTTT-CATTAAG 59
Query 65 TCTTTGCTTCCGATCCAAGCCCCCTTCAAGA-TTTCTGTGTCGGCGTTAACACACCAGTA 123
| ||||| || |||||| | ||||| || ||| || || || || ||||| |||| |
Sbjct 60 -CAAGGCTTCGGACCCAAGCTCTCTTCAGGACTTT-TGCGTTGGTGTCAACACCCCAGCA 117
Query 124 GATGGCGTGTTTGTGAATGGAAAATTCTGCAAGGATCC-AAGGATTGTTTCCGCGGATGA 182
||||| || |||||||| ||||| ||||||||||| || || | | || | | || ||
Sbjct 118 GATGGTGTTTTTGTGAACGGAAAGTTCTGCAAGGACCCGAA-GCTCGTCACAGTAGAAGA 176
Query 183 TTTCTTTTTCT-CTGGACT-CA--A--C-AGAGCTGGAAATACAAATAACGCGGTTGGGT 235
|||||||| | | || || || | | ||| | ||| |||| || | |||||
Sbjct 177 CTTCTTTTT-TACAGGGCTCCACGAGGCAAGACCACCTAATCCAAA-AA--C---TGGGT 229
Query 236 CCAACGTGACAACCGTCAATGTTAACAACCT-CGGAGGATTAAACACCCTTGGAATCTCA 294
| ||||| ||| ||||||||||||||||||| | ||| |||||||| ||||||||||||
Sbjct 230 CTAACGTAACAGCCGTCAATGTTAACAACCTAC-CAGGGTTAAACACTCTTGGAATCTCA 288
Query 295 CTAGTTCGTATAGACTATGCACCCAACGGTCAGAACCCACCTCACACCCACCCACGTGCC 354
|| || ||||| ||||||| | |||| ||||||||||||||||||||||||||||||
Sbjct 289 CTTGTCCGTATCGACTATGGAGTTTACGGACAGAACCCACCTCACACCCACCCACGTGCC 348
Query 355 ACCGAGATCTTGGT-TGTC-CAACAAGGAACTCTACTCGTAGGGTTTATCTCATCAAACC 412
||||| ||||| | |||| | ||||| || |||| |||||| || | |||||||
Sbjct 349 TCCGAGGTCTTG-TATGTCGCGGTT-GGAACACTTTTCGTTGGGTTTGTCACGTCAAACC 406
Query 413 AAGACGGAAACCGTCTTTTC-GCCAAAACGCTCAACGTGGGTGATGTATTTGTGTTTCCA 471
|| ||| || |||||| | ||||| || ||| ||||||||| ||||||||||||
Sbjct 407 CCGA---AAATCGCCTTTTCAGT-AAAACACTTTACGAGGGTGATGTCTTTGTGTTTCCA 462
Query 472 GAAGGACTCATCCATTTCCA-GTTCAACCTAGGAGGAAT-TCCAGCGGTAGCAATCGCTG 529
| |||||||| |||||||| || ||| | ||| ||| ||| ||||| ||| ||||||
Sbjct 463 CAGGGACTCATTCATTTCCAAGTG-AACGTTGGAA-AATATCCGGCGGTTGCATTCGCTG 520
Query 530 CTTTGAGCAGCCAAAACGCAGGTGTTATCACGATTGCTAACACAATATTTGGGTCTAAAC 589
| | |||||||||||| | ||||| ||||| |||||| |||| | ||||||||||| |
Sbjct 521 GTCTCAGCAGCCAAAACCCTGGTGTCATCACTATTGCTGACACCGTGTTTGGGTCTAACC 580
Query 590 CAGATATAGACCCGAA-TGTTCTTGCAAGGGCATTCCA 626
|| | |||||||| || | |||||||||| ||||||||
Sbjct 581 CACAGATAGACCC-AAGTTTTCTTGCAAGTGCATTCCA 617
> AT1G09560.1 | Symbols: GLP5 | germin-like protein 5 | chr1:3093839-3094864
FORWARD LENGTH=942
Length=942
Score = 63.9 bits (34), Expect = 2e-09
Identities = 76/95 (80%), Gaps = 8/95 (8%)
Strand=Plus/Plus
Query 270 AGGATTAAACACCCTTGGAATCTCACTAGT-TCGTATAGACTATGCACCCA--ACGG-TC 325
|||| | ||||| ||||| |||| || | |||||| ||||| ||| ||| | || |
Sbjct 315 AGGACTCAACACACTTGGTGTCTCCCT-CTCTCGTATCGACTACGCA-CCAGGA-GGCTT 371
Query 326 AGAACCCACCTCACACCCACCCACGTGCCACCGAG 360
| ||||||||||||||||||||||||||||| |||
Sbjct 372 A-AACCCACCTCACACCCACCCACGTGCCACTGAG 405
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 32350790668
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5