BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg890911 Length=321 Score E Sequences producing significant alignments: (Bits) Value AT2G30810.1 | Symbols: | Gibberellin-regulated family protein ... 377 3e-104 > AT2G30810.1 | Symbols: | Gibberellin-regulated family protein | chr2:13127826-13128666 REVERSE LENGTH=476 Length=476 Score = 377 bits (204), Expect = 3e-104 Identities = 287/326 (88%), Gaps = 10/326 (3%) Strand=Plus/Plus Query 1 ATGGTGAAGCTCATCA-tt-tttttAGTTGTATTCATTTTGTTGTTTGCTACTCAATTTT 58 ||| |||||||||| | || | ||| ||| ||| || ||||||||||||||||||||||| Sbjct 37 ATGATGAAGCTCAT-AGTTGTCTTT-GTTATATCCAGTTTGTTGTTTGCTACTCAATTTT 94 Query 59 CTAATGCTGAGGGACTAGAAAGTCTAGTTGAAGCACCTGCAATCCATAAG-ATGAAAAGA 117 |||||| ||| | | |||| |||| || | |||||||||||||||||||| ||| | || Sbjct 95 CTAATGGTGATGAATTAGAGAGTCAAGCTCAAGCACCTGCAATCCATAAGAATG-GAGGA 153 Query 118 GAAGGCTCACTTCGAAA--AGAAGAATGTCCAATGGCATGTGAATTTCGATGTTCAGTGA 175 |||||||||||| ||| |||||||||||||| ||||||||||| ||||||||| | || Sbjct 154 GAAGGCTCACTT--AAACCAGAAGAATGTCCAAAGGCATGTGAATATCGATGTTCGGCGA 211 Query 176 CATCTCACAAGAAATCATGTTTGTTTTTCTGTAACAAATGTTGTAACAAATGTTTGTGTG 235 ||||||||| |||| ||||||||||||| || |||||||||||||||||||||||||||| Sbjct 212 CATCTCACAGGAAACCATGTTTGTTTTTTTGCAACAAATGTTGTAACAAATGTTTGTGTG 271 Query 236 TACCGTCGGGAACATATGGACACAAAGAAGAATGTGCTTGCTACGATAAATGGAGGACCA 295 |||| |||||||||||||||||||||||||||||| |||||||| |||| |||| ||||| Sbjct 272 TACCATCGGGAACATATGGACACAAAGAAGAATGTCCTTGCTACAATAATTGGACGACCA 331 Query 296 AAAAAGGTGGACCAAAATGTCCATGA 321 || ||||||||||||||||||||||| Sbjct 332 AAGAAGGTGGACCAAAATGTCCATGA 357 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14929521453 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5