BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891002 Length=954 Score E Sequences producing significant alignments: (Bits) Value AT4G13660.1 | Symbols: ATPRR2, PRR2 | pinoresinol reductase 2 |... 1413 0.0 > AT4G13660.1 | Symbols: ATPRR2, PRR2 | pinoresinol reductase 2 | chr4:7946155-7948376 FORWARD LENGTH=1206 Length=1206 Score = 1413 bits (765), Expect = 0.0 Identities = 892/955 (93%), Gaps = 2/955 (0%) Strand=Plus/Plus Query 1 ATGAAAGAGACTAATTTTGGCGAGAAAACGCGGGTTCTGGTGGTTGGTGGGACTGGATCG 60 |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct 129 ATGAAAGAGACTAATTTTGGCGAGAAAACGCGCGTTCTGGTAGTTGGTGGGACGGGATCA 188 Query 61 TTGGGGAGGAGGATCGTAACTGCGTGTTTGGCTGAGGGACACGAGACTTACGTTCTCCAG 120 |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| Sbjct 189 TTGGGGAGGAGGATTGTAAGTGCGTGTTTGGCTGAGGGACACGAGACTTATGTTCTCCAG 248 Query 121 AGGCCGGAGAGCGGAGTGGACCTCGAGAAGGTGCAGCTTC-TCTATTCTTTCAAAAGACT 179 ||||||||| ||||||||| |||||||||||||||| | ||| ||||||||||||||| Sbjct 249 CGGCCGGAGATTGGAGTGGACATCGAGAAGGTGCAGCTACTTCT-TTCTTTCAAAAGACT 307 Query 180 CGGCGCACATCTTGTCGAAGGCTCATTCTCCGATCACCAGAGCCTTGTCTCTGCCGTGAA 239 ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || Sbjct 308 CGGCGCACATCTTGTGGAAGGCTCATTCTCCGATCACCAAAGCCTTGTCTCTGCCGTAAA 367 Query 240 GCAAGTCGATGTGGTTGTCTCCGCCATGTCCGGTGTCCATTTCCGCACCCACAACATCCC 299 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 368 GCAAGTCGACGTGGTTGTCTCCGCCATGTCCGGTGTCCACTTCCGCACCCACAACATCCC 427 Query 300 CGTTCAGCTCAAGCTCGTCAAAGCCATCAAAGAGGCTGGTAACGTCAAGCGGTTCTTACC 359 ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| Sbjct 428 CGTTCAGCTCAAGCTCGTCGCAGCCATCAAAGAGGCCGGTAACGTCAAGCGTTTCTTACC 487 Query 360 ATCAGAATTTGGAATGGATCCATCACGTATGGGACATGCCATGCCACCAGGAAGTGAAAC 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 488 ATCAGAATTTGGAATGGATCCGTCACGTATGGGACATGCCATGCCACCAGGAAGTGAAAC 547 Query 420 ATTCGATCAAAAAATGGAAGTACGAAATGCAATCGAGGCCGCGGGGATCCCCCACACATA 479 ||| ||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||| Sbjct 548 ATTTGATCAAAAAATGGAAATACGAAATGCAATTAAGGCCGCCGGGATCTCCCACACATA 607 Query 480 TATCGTCGGTGCTTGTTTTGCCGCATACTTTGGCGGAAATTTATCTCAATTGGGAACTTT 539 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 608 CCTCGTCGGTGCTTGTTTTGCCGCATACTTCGGCGGAAATTTATCTCAAATGGGAACTTT 667 Query 540 GCTCCCTCCAAAAAAGACAGTTGATATTTATGGGGACGGAAATGTTAAAGTGGTATACGT 599 | ||||||| ||||| | |||||||||||||||||||||||||||||||||||| | ||| Sbjct 668 GTTCCCTCCGAAAAACAAAGTTGATATTTATGGGGACGGAAATGTTAAAGTGGTGTTCGT 727 Query 600 AGATGAAGATGACATGGCAAAATACGCCGCAAAGACGCTTAACGATCCCCGAACGATGAA 659 |||||||||||||||||||||||| | || ||||||||||| |||||||||||| |||| Sbjct 728 AGATGAAGATGACATGGCAAAATATACAGCGAAGACGCTTAATGATCCCCGAACGTTGAA 787 Query 660 TAAAACAGTGTATGTTAGGCCTACCGACAACATTCTCACACATATGGAACTAGTTCAGAT 719 |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct 788 TAAAACTGTGTATGTTAGACCTACCGACAACATTCTCACACAAATGGAACTAGTTCAGAT 847 Query 720 ATGGGAGAAACTAAGTGGGAAAGAGTTGGAGAAGAACTATGTCTCAGCAAAAGACTTTCT 779 |||||||||||||| | |||||||||||||||| |||||| |||| ||| |||||||| Sbjct 848 ATGGGAGAAACTAACCGAAAAAGAGTTGGAGAAGACCTATGTTTCAGGAAACGACTTTCT 907 Query 780 TGCTGACATTGAAGATAAGGAGATACCACACCAAGCGGGAGTAGGACACTTTTATCACAT 839 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 908 TGCTGACATTGAAGATAAGGAGATATCACACCAAGCGGGACTAGGACACTTTTATCACAT 967 Query 840 ATACTACGAAGGTTGTCTCACAGATCATGAAGTTGGAGACGACGAAGAAGCTTCTAAACT 899 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 968 ATACTACGAAGGTTGTCTCACAGATCATGAAGTTGGAGACGACGAAGAAGCTACTAAACT 1027 Query 900 CTATCCGGAGGTGAAGTATACACGCATGGATGAATATTTGAAAATTTTCGTATAA 954 ||||||||| |||||||| | |||||||||||||||||||||||||||||||||| Sbjct 1028 CTATCCGGATGTGAAGTACAAACGCATGGATGAATATTTGAAAATTTTCGTATAA 1082 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46667522563 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5