BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891043 Length=399 Score E Sequences producing significant alignments: (Bits) Value AT5G10320.1 | Symbols: | unknown protein; Has 54 Blast hits to... 110 1e-23 > AT5G10320.1 | Symbols: | unknown protein; Has 54 Blast hits to 53 proteins in 19 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:3243956-3246720 REVERSE LENGTH=1553 Length=1553 Score = 110 bits (59), Expect = 1e-23 Identities = 74/81 (91%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 218 ATGCTGAATCATGAGTTTTGTTTGACACTAACT-CGTTGAAACCGCTTGGAGATCTGCTT 276 ||||||||||| ||||| ||||||| ||||| | ||||||| |||||||||||||||||| Sbjct 713 ATGCTGAATCACGAGTTCTGTTTGAAACTAA-TCCGTTGAAGCCGCTTGGAGATCTGCTT 771 Query 277 GAACGTGAGGGCCTTTTGACA 297 |||||||||| |||||||||| Sbjct 772 GAACGTGAGGCCCTTTTGACA 792 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18850405875 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5