BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891079 Length=849 Score E Sequences producing significant alignments: (Bits) Value AT5G32460.1 | Symbols: | Transcriptional factor B3 family prot... 863 0.0 > AT5G32460.1 | Symbols: | Transcriptional factor B3 family protein | chr5:12081803-12084148 REVERSE LENGTH=1593 Length=1593 Score = 863 bits (467), Expect = 0.0 Identities = 555/597 (93%), Gaps = 8/597 (1%) Strand=Plus/Plus Query 1 ATGGCTAATTCAATGTTCTCTTCTTCGGCCAAGCCACACTTCTTGAAGCCTATTCTTCCA 60 ||| || || |||||||||||||||||||||||||||||||| | |||||||| |||||| Sbjct 1 ATGACTGATGCAATGTTCTCTTCTTCGGCCAAGCCACACTTCATCAAGCCTATGCTTCCA 60 Query 61 GGCTTCAAAACCTATATT-TTGATTCCTAAAGCTTTTTATTCGAAATACTTAGAGGGAAG 119 |||||| ||||||||||| || ||||||||||||||||| ||||| |||||||||||||| Sbjct 61 GGCTTCGAAACCTATATTGTT-ATTCCTAAAGCTTTTTACTCGAACTACTTAGAGGGAAG 119 Query 120 ACAAGAGGGAAACGCTGCAGAACTTAGATCAGACGCGTCGGAGATCACCTGGAATATTAA 179 |||||||||||||||||||||||| ||||||||||| |||||||||| ||||| || || Sbjct 120 ACAAGAGGGAAACGCTGCAGAACTGAGATCAGACGCCACGGAGATCACTTGGAAAATAAA 179 Query 180 GATAGACGGCCGAAGAATGACCAAAGGATGGGAAGAATTTGCGGTGGGTCACAATCTTCA 239 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 180 GATAGACGGCCGAAGAATGACCAAAGGGTGGGAAGAATTTGCGGTGGCTCACAATCTTCA 239 Query 240 GGTCGGCGACATTCTTGTTTTCAGACACGAAGGGAATCTCTTGTTTCATGTCACACCTTT 299 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 240 GGTCGACGACATTCTTGTTTTCAGACACGAAGGAAATCTCTTGTTTCATGTCACACCTTT 299 Query 300 TGGACTGAGTTGCTGTGAGATACTTTACTCACAGA-ATGACGAGAAAGTTGTCAAAGACA 358 ||||||||||| |||||||||||||||||||||| | |||||||||| ||||||||||| Sbjct 300 TGGACTGAGTTTTTGTGAGATACTTTACTCACAGAGA-GACGAGAAAGATGTCAAAGACA 358 Query 359 AGACGGGAAAGGTTACACGATATAAAACGGTGAAG-AAAACGGCAAAAAATGAGTGTTCA 417 |||||||||||||||| ||| || |||||||||| ||||||| |||||||||||||||| Sbjct 359 CGACGGGAAAGGTTACAAGATCTAGAACGGTGAAGAAAAACGG-AAAAAATGAGTGTTCA 417 Query 418 TCAGTGGACACTGATTTTGTGGTCCCTGTCACCGCCTCAAACCAACGACTTGATTCATTT 477 ||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||| Sbjct 418 TCAGTGGACACTGATTTTGTGGTCCCTGTTACAGCCTCAAACCAACGAGTTGATTCATTT 477 Query 478 TATCTTCCAAGAGGTTTTACCACCTCAAGTGGTTTGAGTAAACTGTGCAATGAGATAATT 537 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 478 TATCTTCCAAGAGGTTTTACCACATCAAGTGGTTCGAGTAAACTGTGCAATGAGATAATT 537 Query 538 CTAATGGATGAAAAA-AGCAGGCCATCGACGCTAAAACTGTGTTACCATAAATCAAG 593 ||||| ||||||||| | |||||||||||||||||||||| ||||| |||||||||| Sbjct 538 CTAATAGATGAAAAAGA-CAGGCCATCGACGCTAAAACTGCGTTACAATAAATCAAG 593 Score = 327 bits (177), Expect = 8e-89 Identities = 225/247 (91%), Gaps = 7/247 (3%) Strand=Plus/Plus Query 593 GAAAACCACCCGTGCTCCGGATTTATCCTTTGGAGAGAGATGAGGACAACATTGGAAACC 652 ||||| |||||||||||||||||| |||||||||||| |||||||||||||||| ||| | Sbjct 689 GAAAAACACCCGTGCTCCGGATTTTTCCTTTGGAGAGGGATGAGGACAACATTGAAAAAC 748 Query 653 ACTCGAAGAAGATTAAGCAAGAAGTAGAACATGA-GA--CTGTGAAAGAAGAGACGAATG 709 |||| |||||| |||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct 749 ACTCAAAGAAGGTTAAGCAAGAAGTAGAGCATGAGGAGTCTGTGAAAGAAGAGACGAATG 808 Query 710 TGGAATCAGGAAAGCTTAAAAGAGATGGATTACTGAAGAAAGATCCACAAAAAGT-GTGT 768 |||||||||||||||||||||||||| |||||||| |||||||||| |||||| | |||| Sbjct 809 TGGAATCAGGAAAGCTTAAAAGAGATAGATTACTGCAGAAAGATCC-CAAAAATTTGTGT 867 Query 769 TCTTCATCACACGACAC-AATCTTTGTGGTCCCTGGCACAGCTTCAAACCAACGAAATGA 827 ||| ||||||| ||||| ||| ||||||||||||| ||||||||||||||||||| |||| Sbjct 868 TCTACATCACAAGACACTAAT-TTTGTGGTCCCTGTCACAGCTTCAAACCAACGACATGA 926 Query 828 TTCATTT 834 ||||||| Sbjct 927 TTCATTT 933 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41392937128 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5