BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891115 Length=258 Score E Sequences producing significant alignments: (Bits) Value AT2G26320.1 | Symbols: AGL33 | AGAMOUS-like 33 | chr2:11205389-... 252 1e-66 > AT2G26320.1 | Symbols: AGL33 | AGAMOUS-like 33 | chr2:11205389-11206287 REVERSE LENGTH=330 Length=330 Score = 252 bits (136), Expect = 1e-66 Identities = 222/262 (85%), Gaps = 12/262 (5%) Strand=Plus/Plus Query 1 ATGGGAAGGAAGAAAA-TAAAACTGAATAGACTAGAAAGCCTGAAAGAGAGAAGTAGCAA 59 ||||| ||||| |||| ||||| |||| ||| |||| ||| ||||||||||||||||| Sbjct 49 ATGGGGAGGAA-AAAACTAAAATTGAAGAGAATAGAGTCCCTAAAAGAGAGAAGTAGCAA 107 Query 60 ATACTCAAAACGTAAAAAAGGGCTTTTCAAGAAGGCAGAAGAAGTAGCAATGTTGTGCGA 119 || ||||||||||||||||| ||||| || |||||||||||||||||| |||| ||||| Sbjct 108 ATTTTCAAAACGTAAAAAAGGTCTTTTTAAAAAGGCAGAAGAAGTAGCATTGTTATGCGA 167 Query 120 -TTGTGAAATAATTTTGATTGTTGTTTCTCCGACCGACAAGCCTACCA-TTTTCCACACT 177 | | || ||||| || |||||||||||||| ||||| ||||||| || |||| ||||| Sbjct 168 CTCG-GATATAATGTTAATTGTTGTTTCTCCCACCGAGAAGCCTA-CAGTTTTTAACACT 225 Query 178 CGTTCTAAG-TCCTT-CAGTAAAAT-TTATGAGAGGTATTGCATGCTTTCATTACAAGAA 234 |||||| || || || || || ||| | |||||||| |||||||||||||||||||||| Sbjct 226 CGTTCT-AGATCATTCCA-TACAATCCT-TGAGAGGTTTTGCATGCTTTCATTACAAGAA 282 Query 235 CGGGAAGAAAGGTGTGATCTTT 256 |||||||| ||||||||||||| Sbjct 283 CGGGAAGAGAGGTGTGATCTTT 304 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11762653266 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5