BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891186 Length=1350 Score E Sequences producing significant alignments: (Bits) Value AT5G35770.1 | Symbols: SAP | Transducin/WD40 repeat-like superf... 2030 0.0 > AT5G35770.1 | Symbols: SAP | Transducin/WD40 repeat-like superfamily protein | chr5:13936086-13940867 REVERSE LENGTH=1793 Length=1793 Score = 2030 bits (1099), Expect = 0.0 Identities = 1270/1352 (94%), Gaps = 13/1352 (1%) Strand=Plus/Plus Query 1 ATGTCTACCTCCTCCTCTTCTTCCAACAACGGAGACTCCGACGCCGGTGGAAGCGGCGGC 60 |||||||||||||||||||||||| ||||| | || |||||||||||||||||| Sbjct 82 ATGTCTACCTCCTCCTCTTCTTCCGACAAC---G-----GA-GCCGGTGGAAGCGGCGGC 132 Query 61 GTTTTCGAGGCCCCTTCTCCTTCTCGCCCCCGCCGTGGCGCTAACGACGTCTGGCCGGAG 120 |||||||||||||| ||||| || ||||| ||||| || || ||||| || ||||||||| Sbjct 133 GTTTTCGAGGCCCCATCTCCATCCCGCCCTCGCCGCGGAGCCAACGATGTTTGGCCGGAG 192 Query 121 CCTTTTCTTGAATCTCTCGCCGTTCAGGTCGCCGTTAATGCTTCCTCATCCTCCGGCCTC 180 |||||||||||||||||||||||||| || |||||||| |||||| ||||| |||||||| Sbjct 193 CCTTTTCTTGAATCTCTCGCCGTTCAAGTTGCCGTTAACGCTTCCACATCCGCCGGCCTC 252 Query 181 CTCGCCTCAGCTCCGGCTCTTGCCAACGTTTTTCGGGTTTGCACCACGTGGCAAGCTGTC 240 |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 253 CTCGCCGCAGCTCCGGCTCTTGCCAACGTTTTTCGGGTTTGCACCACGTGGCACGCTGTC 312 Query 241 TCTCGCTCCGACCATCTATGGCAACTCCTCTCTCGCCAAGTTTGGGCAAGAACACATTTG 300 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 313 TCTCGCTCCGACCATCTATGGCAACTACTATCTCGCCAAGTTTGGGCAAGAACACATTTG 372 Query 301 ATGCACGACACGTGGCGGGATGAGTTCATCTACCGTCATCGAACGGCCAGAAACTTCCGG 360 |||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| Sbjct 373 ATGCACGACACGTGGCGGGACGAGTTCATCTACCGTCATCGGACGGCTAGAAACTTCCGG 432 Query 361 ACGCGTACTCACACCTACTTCACTCTCCAATTTGACCCGTCTGATGTGGACGAGCCTGAT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 433 ACGCGTACTCACACCTACTTCACTCTCCAATTTGACCCGTCTGATGTGGACGAGCCTGAT 492 Query 421 AGTCTCTCATGCCGTTGTCTCACTCTCTCCGACCTCTACTTAGCCGCAGGGTTCGCCGAC 480 |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 493 AGTCTCTCTTGCCGTTGTCTCACCCTCTCAGACCTCTACTTAGCCGCAGGGTTCGCCGAC 552 Query 481 GGAACCGTCCGCCTCTTTCTTTTAAATAGCCGTCTCCACGTCAGGA-CTCTACGGCCACC 539 ||||||||||| || ||||||||||| | ||| ||||||||||||| || |||||||||| Sbjct 553 GGAACCGTCCGGCTTTTTCTTTTAAACAACCGACTCCACGTCAGGACCT-TACGGCCACC 611 Query 540 TCTACGTGACCGCTTTGGCAGATTCTCACGAGCCGTCTCGGGCATTTTTATATCCGACTC 599 |||||||||||||||||| |||||||||||||||||||| |||||| |||| |||||||| Sbjct 612 TCTACGTGACCGCTTTGGTAGATTCTCACGAGCCGTCTCAGGCATTGTTATCTCCGACTC 671 Query 600 AAGACTCACGTTTGCTACGATGGACGGAGACATCCACGTGGCGGAAATAGACGGCGTTGG 659 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 672 AAGGCTCACGTTCGCTACGATGGACGGAGACATCCACGTGGCGGAAATAGACGGTGTTGG 731 Query 660 TCATACACGCACGGCTTACGCCGGAGATATAGTTAACGACGGTGCTTTGGTAGATTTCAC 719 ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 732 TCACACACGCACGGCTTACGCAGGAGATATAGTTAACGACGGTGCGTTGGTAGATTTCAC 791 Query 720 TGGCTGTGGACGTTGGTGGGTCGGTCTTTTCGCTGGTGTACCAGGTCGTGCCTTTCACAT 779 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 792 TGGCTGTGGACGTTGGTGGGTCGGTCTTTTCGCGGGTGTGCCAGGTCGTGCCTTTCACAT 851 Query 780 ATGGGACTGTAACAGCGAGGAGACAACATTCGTCGGTGGTTCACTCACTGATCCAGAAGC 839 |||||||||||||||||| ||||||||||||||||||||| ||||||| || || ||||| Sbjct 852 ATGGGACTGTAACAGCGAAGAGACAACATTCGTCGGTGGTACACTCACCGACCCTGAAGC 911 Query 840 CGTCATGGGTTGGCACACGTTAACAGAGCTAACAACGTCGCTTGGCCGACTAAGAATCTC 899 |||||||| ||||||||||||||||||||||||||||| |||||||| || |||||||| Sbjct 912 TGTCATGGGATGGCACACGTTAACAGAGCTAACAACGTCCCTTGGCCGTCTCAGAATCTC 971 Query 900 CGGCAACGAGACAGCCGTAGCATGCACGAGATGGAGGATCATGGTGATCGATCTAAGAAA 959 ||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 972 CGGTAACGAGACGGCGGTAGCATGCACGAGATGGAGAATCATGGTGATCGATCTAAGAAA 1031 Query 960 CCAAGGAGTGATCATCGGAGAAGACGAAGAGCAACGTAGAGGACTAATAGTAACAGGCTT 1019 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1032 CCAAGGAGTGATCATCGGAGAAGACGAAGAGCAACGTAGAGGACTAATAGTGACAGGCTT 1091 Query 1020 CGACGCCAACGACGAAGCGTACCTTAGAATGGACAGTAGAGGTAACGCGAGAGTGCGCAG 1079 ||| |||||||||||||||||| ||||| ||||||||||||| ||||| || ||||| || Sbjct 1092 CGATGCCAACGACGAAGCGTACGTTAGATTGGACAGTAGAGGAAACGCTAGCGTGCGAAG 1151 Query 1080 GGTGAACACACTACAAACGGTGTGTGAGTTCCGTGTGAGTGGAGCGGCGCAGAGAAGAGT 1139 ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1152 GGTGAACACGCAACAAACGGTGTGTGAGTTCCGTGTTAGTGGAGCGGCGCAGAGAAGAGT 1211 Query 1140 CATGGGTTGTGTTAATAGACTGCACGCGCTAATGTGCGCAGGTGGTATAATGCGCGTGTG 1199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1212 AATGGGTTGTGTTAATAGACTGCACGCGCTAATGTGCGCAGGTGGTATAATGCGCGTGTG 1271 Query 1200 GGAGGTAGAGAGAGGAGAGTATCTGTACAGTATTAGGGAGAGAGTAGGAGAAGTTGACGC 1259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1272 GGAGGTAGAGAGAGGAGAGTATCTGTACAGTATTAGGGAGAGAGTAGGAGAAGTTGACGC 1331 Query 1260 CATTGTTGCCGATGATAGACATGTGGCGGTTGCTTC-GTCTTCATCAACGGCTCAGAGTA 1318 ||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| Sbjct 1332 CATTGTTGCCGATGATAGACATGTGGCGGTTGCGTCAG-CTTCATCAACGGCTCAGAGTA 1390 Query 1319 TTATACATCTATGGGATTTCGGTGCACTGTAG 1350 |||||||||||||||||||||||||||||||| Sbjct 1391 TTATACATCTATGGGATTTCGGTGCACTGTAG 1422 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66465521580 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5