BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891201 Length=186 Score E Sequences producing significant alignments: (Bits) Value AT5G43745.1 | Symbols: | Protein of unknown function (DUF1012)... 272 7e-73 > AT5G43745.1 | Symbols: | Protein of unknown function (DUF1012) | chr5:17569147-17574971 REVERSE LENGTH=2759 Length=2759 Score = 272 bits (147), Expect = 7e-73 Identities = 173/186 (93%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 1 GATAGCGCAAAGGATATGTCAAGAGCTTCCCCGCCTCGTTCAGAACTCATTGGGGGCTGG 60 ||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 308 GATAGCGCAAAAGATATGTCAAGAGCTTCCTCGCCTCGTTCAGAACTCAGTGGGGGCTGG 367 Query 61 CTTGCCTTTTGCTTATGTATCAAACTCTCGACCTACTCCTCTCAAGTTAGACGTCTCCGT 120 |||||||||||||| || ||| ||||||| |||||||||||||||||| || ||||| | Sbjct 368 CTTGCCTTTTGCTTGTGCATCGAACTCTCTACCTACTCCTCTCAAGTTGGATGTCTCATT 427 Query 121 TCATTCTTTTCAAGATATCAGATGGGGTCTTGCAAGGTTTCTTTACCTGCTCAATATTCA 180 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 428 TCCTTCTTTTCAAGATATCAGATGGGGTCTTGCAAGGTTTCTTTACCTGTTCAATATTCA 487 Query 181 GCTTGA 186 |||||| Sbjct 488 GCTTGA 493 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 8199120213 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5