BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg891235
Length=1509
Score E
Sequences producing significant alignments: (Bits) Value
AT5G36220.1 | Symbols: CYP81D1, CYP91A1 | cytochrome p450 81d1 ... 2189 0.0
> AT5G36220.1 | Symbols: CYP81D1, CYP91A1 | cytochrome p450 81d1
| chr5:14253690-14256033 REVERSE LENGTH=1664
Length=1664
Score = 2189 bits (1185), Expect = 0.0
Identities = 1398/1503 (93%), Gaps = 6/1503 (0%)
Strand=Plus/Plus
Query 1 ATGGAAGAAAACTACATTGGAGTTGTTCTCTACTCCATTTTATCTCTCATCTTCTTGATA 60
|||||||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 19 ATGGAAGAAACCAACATTAGAGTTGTTCTCTACTCCATTTTCTCTCTCATCTTCTTGATA 78
Query 61 ACCTCTCTCAAGTTCTTGAAATCC-AAGAAACAGAATCTTCCGCCGTCTCCCCCGGGATG 119
| |||| |||||||||| ||| || ||||||||||||||||| |||||||| ||||||||
Sbjct 79 ATCTCTTTCAAGTTCTT-AAAACCAAAGAAACAGAATCTTCCACCGTCTCCGCCGGGATG 137
Query 120 GTTGCCGGTAATAGGCCACCTCCGCCTACTGAAGCCACCCATCCACCGCACTCTCCGCTC 179
|||||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||||
Sbjct 138 GTTGCCAATAATAGGCCATCTCCGCCTTCTGAAGCCACCCATCCACCGCACCCTCCGCTC 197
Query 180 CTTCTCGGAGTCCCTCGACCGTAACGGTGGTGGCGGCGTGATGTCCCTCCGACTTGGGTC 239
|||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||| ||
Sbjct 198 CTTCTCCGAGACCCTCGACCACAACGATGGTGGCGGCGTGATGTCCCTCCGACTTGGATC 257
Query 240 CCGTCTAGTCTACGTGGTGTCGTCACATAGGGTTGCTGCGGAGGAGTGCTTTGGCAAGAA 299
||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||
Sbjct 258 CCGTCTAGTCTACGTGGTGTCGTCACATAAGGTTGCGGCAGAGGAGTGCTTTGGCAAGAA 317
Query 300 CGACGTCGTTCTAGCCAACCGGCCTCAAGTGATCATCGGAAAACATGTTGGCTACAACAA 359
||||||||||||||| |||||||| || ||||||||||||||||||||||| || |||||
Sbjct 318 CGACGTCGTTCTAGCTAACCGGCCACAGGTGATCATCGGAAAACATGTTGGTTATAACAA 377
Query 360 CACAAACATGATCGCCGCACCTTACGGTGATCACTGGCGTAACCTCCGTCGCATCTGCAC 419
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 378 TACAAACATGATCGCTGCACCTTACGGTGATCACTGGCGTAACCTCCGTCGCCTCTGCAC 437
Query 420 CATCGAGATCTTTTCCACTCACCGGCTTAACTGCTTTCTTTATGTCCGTACCGACGAAGT 479
|||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 438 TATCGAGATCTTTTCAACACACCGCCTTAACTGCTTTCTTTATGTCCGTACCGACGAAGT 497
Query 480 ACGTCGCCTTATTAGCCGCCTCTTTCGTGTCGCAGGAACTGAAAAAACGGTTGTGGAAAT 539
|||||||||||| |||||||||| |||| |||||||||| ||||||| ||||||||| |
Sbjct 498 ACGTCGCCTTATAAGCCGCCTCTCTCGTCTCGCAGGAACCAAAAAAACTGTTGTGGAATT 557
Query 540 GAAACCAATGCTTATGGACTTGACATTCAACAATATAATGAGAATGATGACCGGAAAACG 599
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 558 GAAACCAATGCTTATGGACTTGACATTCAACAACATAATGAGAATGATGACCGGAAAACG 617
Query 600 TTACTACGGTGAAGAAACAACCGATGAGGAAGAAGCAAAACGTGTCCGTAAGTTGGTGGC 659
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 618 ATACTACGGTGAAGAAACAACCGATGAGGAAGAAGCAAAGCGTGTCCGTAAGTTGGTAGC 677
Query 660 TGATGTTGGAGCCAACACAAGTTCAGGCAACGCCGTTGACTATGTTCCGATTCTAAGACT 719
|||||||| || ||||| ||||||||||||||||||||||| || || || || |||||
Sbjct 678 AGATGTTGGGGCTAACACGAGTTCAGGCAACGCCGTTGACTACGTCCCCATCCTCAGACT 737
Query 720 GTTTTCAAGTTATGAGAAA-AGGGTaaaaaaaTTAGGAGAGAAGACAGATAAATTTTTAC 778
||||||||||||||| ||| ||||| ||||| ||||||||| |||||||||| |||||||
Sbjct 738 GTTTTCAAGTTATGA-AAATAGGGTTAAAAAGTTAGGAGAGGAGACAGATAAGTTTTTAC 796
Query 779 AAGGTCTTATTGACGATAAACGTGGACAACAAGAAACCGGTACTACAATGATCGATCATT 838
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 797 AAGGTCTCATTGACGATAAACGTGGGCAACAAGAAACCGGTACTACAATGATCGATCATT 856
Query 839 TGCTTGTCCTCCAAACATCTGATACTGAGTATTACACTGATGAAATCATCAAAGGCATCA 898
||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 857 TGCTTGTCCTCCAAAAATCTGATATTGAGTATTACACTGATCAAATCATCAAAGGCATCA 916
Query 899 TACTGATAATGGTAATAGCAGGGACTAACACATCAGCAGTCACTCTAGAATGGGCACTCT 958
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 917 TACTGATAATGGTAATAGCAGGGACTAACACATCAGCAGTCACTCTAGAATGGGCACTTT 976
Query 959 CCAATTTGCTTAACCATCCTGATGTAATAAGAAAAGCTAGA-ACCGAAATCGATAACCAG 1017
|||||||||||||||||||||| |||||| ||||| ||| || ||||||||||||| |
Sbjct 977 CCAATTTGCTTAACCATCCTGACGTAATATCTAAAGCGAGAGAC-GAAATCGATAACCGG 1035
Query 1018 GTTGGTTTAGACCGGCTTATGGAAGAATCAGATCTTAGCGAGCTACCATATCTTAAGAAC 1077
|||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||
Sbjct 1036 GTTGGTTTAGACCGGCTTATCGAAGAAGCAGATCTTAGCGAGCTACCATATCTAAAGAAC 1095
Query 1078 ATTGTCCTCGAGACCCTTAGGTTACACCCGGCTACACCATTGCTAGTCCCACACATGGCA 1137
|||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct 1096 ATTGTCCTTGAGACCCTTAGGCTACACCCAGCTACACCATTGCTAGTCCCACACATGGCA 1155
Query 1138 TCAGAGGATTGCAAGATAGGGTCCTACGATATGCCGCGTGGCACAACATTGTTGGTGAAT 1197
||||| |||||||||||||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct 1156 TCAGAAGATTGCAAGATAGGATCCTACGATATGCCACGTGGTACAACGTTGTTGGTGAAT 1215
Query 1198 GCATGGGCCATACACAGGGATCCAAACACGTGGGATGATCCGGATAGCTTTAAACCAGAG 1257
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 GCATGGGCCATACATAGGGATCCAAACACGTGGGATGATCCGGATAGCTTTAAACCAGAG 1275
Query 1258 CGGTTTGAGAAAGAAGAAGAAGCACAAAAGCTTATGGCGTTTGGATTAGGGAGAAGGGCG 1317
||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||| |||
Sbjct 1276 CGGTTTGAGAAAGAAGAGGAAGCACAAAAGCTTCTGGCGTTTGGATTAGGTAGAAGAGCG 1335
Query 1318 TGTCCTGGATCGGGTCTGGCCCAACGGATCGTGGGGCTTGCACTCGGGTCATTGATACAA 1377
|||||||||||||||||||||||||| |||||||| || || ||||||||||||||||||
Sbjct 1336 TGTCCTGGATCGGGTCTGGCCCAACGAATCGTGGGACTAGCTCTCGGGTCATTGATACAA 1395
Query 1378 TGTTTTGAATGGGAGAGAGTTGGAAATGAGGAAGTTGATATGAAGGAAGGAGTTGGGAAT 1437
|| |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||
Sbjct 1396 TGCTTTGAATGGGAGAGAGTTGGGAATGTGGAAGTGGATATGAAGGAAGGAGTTGGGAAT 1455
Query 1438 ACTGTACCCAAAGCGATTCCGTTGCAAGCCGTTTGCAAAGCTCGTCCATTTCTACATAAG 1497
|||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||
Sbjct 1456 ACTGTACCCAAAGCGATTCCTTTGAAAGCTATTTGCAAAGCTCGTCCATTTCTACATAAG 1515
Query 1498 ATT 1500
|||
Sbjct 1516 ATT 1518
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74447408235
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5