BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891284 Length=423 Score E Sequences producing significant alignments: (Bits) Value AT5G36960.1 | Symbols: | unknown protein; Has 1807 Blast hits ... 542 1e-153 > AT5G36960.1 | Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:14598693-14599988 FORWARD LENGTH=725 Length=725 Score = 542 bits (293), Expect = 1e-153 Identities = 375/413 (91%), Gaps = 11/413 (3%) Strand=Plus/Plus Query 10 TCGTCGTCGTGGGAGATGCAACTAATGGAAACGGCTAAAGAGGAGCTGGAGATTCTTCAG 69 |||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| Sbjct 62 TCGTCGTCGTGGGAGATGCAACTAGTGGAAACGGCTAAAGAGGAACTCGAGATTCTTCAG 121 Query 70 TCTCAATATCCAAACCGCTTTGCGTACCTTAAATCCGATCTTCAATCTTTCATTTCTCAC 129 ||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct 122 TCTCAATATCCCAACCGCTTCGCTTACCTCAAATCCGATCTTCAATCTTTCATTTCTCAC 181 Query 130 CTCCGTGAAGATCACGCGCCGCCGCGtccctcctcctcctcctcctcctcctcTGTCGTT 189 ||||||||||||||||||||||||||| | | | | | |||||||||| || || Sbjct 182 CTCCGTGAAGATCACGCGCCGCCGCGT---T--T-AT-C-AC-CCTCCTCCTCCGTAGTC 232 Query 190 CTTACTCAAGAGTCATCAAATTGTAAGAATAAGCAAAAACATAAGAAGAGAAAAAGCGTC 249 || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct 233 CTCACTCAAGAGTCATCAAATTGTAACTATAAGCAAAAACATAAGAAGAGAAAGTGCGTC 292 Query 250 ATGGACAATTTTGGGGATCAAGCATCGTCATCAACAATTGGAAAGATCCACAAGAACAAT 309 ||||||||||| || ||||||||||| || ||||||| ||||||||||| ||||||||| Sbjct 293 ATGGACAATTTAGGAGATCAAGCATCATCGTCAACAACGGGAAAGATCCATAAGAACAAT 352 Query 310 AACAAGATAGGTCAGAGAGTGGTCACCG-AGAGAAAAAATAGAGTTGAAATGGTTCTTGA 368 |||||||| |||||||||||||||| || ||| ||||||||||||||||||||||||||| Sbjct 353 AACAAGATGGGTCAGAGAGTGGTCA-CGAAGAAAAAAAATAGAGTTGAAATGGTTCTTGA 411 Query 369 GAGGGCTCAACTTTGTCTCCAGAAGATAAGAGACGTGAAAGCCTCTTTGTGTT 421 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 412 GAGGGCTCAACTTTGTCTCCAAAAGATAAGAGACGTGAAAGCCTCTTTGTGTT 464 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20056831851 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5