BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891319 Length=360 Score E Sequences producing significant alignments: (Bits) Value AT2G25010.1 | Symbols: | Aminotransferase-like, plant mobile d... 396 8e-110 AT5G37352.1 | Symbols: | Pseudogene of AT2G25010 | chr5:147961... 329 9e-90 > AT2G25010.1 | Symbols: | Aminotransferase-like, plant mobile domain family protein | chr2:10631531-10633663 FORWARD LENGTH=1806 Length=1806 Score = 396 bits (214), Expect = 8e-110 Identities = 227/233 (97%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 1 ATGACTATAACTTTAGATC-AAGTTGCTTTAGTACTTGGACTTGAGATTGATGGAGATCC 59 ||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 449 ATGACTATAACCTTAGA-CGAAGTTGCTTTAGTACTTGGACTTGAGATTGATGGAGATCC 507 Query 60 TATTGTTGGTTCTAAAGTTGGTGATGAGGTTGCTATGGATATGTGTGGTAGACTTTTAGG 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 CATTGTTGGTTCTAAAGTTGGTGATGAGGTTGCTATGGATATGTGTGGTAGACTTTTAGG 567 Query 120 GAAGTTACCTTCTGCTGCTAATAAAGAAGTTAATTGTTCTAGGGTTAAGCTTAATTGGCT 179 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 568 GAAGTTACCATCTGCTGCTAATAAAGAAGTTAATTGTTCTAGGGTTAAGCTTAATTGGCT 627 Query 180 TAAAAGAACTTTCTCTGAGTGTCCTGAAGATGCTTCTTTCCATGTTGTTAAAT 232 |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 628 TAAAAGAACTTTCTCTGAGTGTCCTGAAGATGCTTCTTTCGATGTTGTTAAAT 680 > AT5G37352.1 | Symbols: | Pseudogene of AT2G25010 | chr5:14796126-14797001 FORWARD LENGTH=790 Length=790 Score = 329 bits (178), Expect = 9e-90 Identities = 209/224 (93%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 10 ACTTTAGATCAAGTTGCTTTAGTACTTGGACTTGAGATTGATGGAGATCCTATTGTTGGT 69 |||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 10 ACTTTAGACCAAGTTGCTTTACTACTTGGGCTTGAGATTGATGGAGATCCTATTGTTGGT 69 Query 70 TCTAAAGTTGGTGATGAGGTTGCTATGGATATGTGTGGTAGACTTTTAGGGAAGTTACCT 129 ||||||||||||||||||||| |||||||| |||||||||||||||||||||| || || Sbjct 70 TCTAAAGTTGGTGATGAGGTTTCTATGGATCTGTGTGGTAGACTTTTAGGGAAATTGCCA 129 Query 130 TCTGCTGCTAATAAAGAAGTTAATTGTTCTAGGGTTAA-GCTTAATTGGCTTAAAAGAAC 188 ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 130 TCTGCTGCTAACAAAGAAGTTAATTGTTCTAGGGTTAAAGCTTAATTTCCTTAAAAGAAC 189 Query 189 TTTCTCTGAGTGTCCTGAAGATGCTTCTTTCCATGTTGTTAAAT 232 |||||||||||||||||||||||||||||| |||||||| ||| Sbjct 190 TTTCTCTGAGTGTCCTGAAGATGCTTCTTTTGATGTTGTTGAAT 233 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16889963664 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5