BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg891371
Length=2556
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43730.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1637 0.0
AT5G43740.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1465 0.0
AT1G51480.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 1448 0.0
> AT5G43730.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:17560179-17562929 FORWARD LENGTH=2751
Length=2751
Score = 1637 bits (886), Expect = 0.0
Identities = 1944/2435 (80%), Gaps = 151/2435 (6%)
Strand=Plus/Plus
Query 58 GGCTGCTTGTTT-GGTGATGGAAATTACATTCATTTGATGGAGGCTAATCTTGATGCTCT 116
|||||||| ||| | ||| | || |||||||| ||||||||| | ||||| ||||||||
Sbjct 143 GGCTGCTT-TTTAAGCGATAGCAACTACATTCACTTGATGGAGTCAAATCTCGATGCTCT 201
Query 117 GCAGAAAACTATGCAAGAGCTTGACG-A-GAGGCGTGATGATCTGTTAAG-AAGAGTTTC 173
||||||||||||| |||| ||| | | | | |||| ||||||||||| || |||||||||
Sbjct 202 GCAGAAAACTATGGAAGAACTT-AAGAATG-GGCGAGATGATCTGTT-AGCAAGAGTTTC 258
Query 174 CATAGAAGAAGATCAAGGTTTGCAAAGGCTTGCTCAAGTCCAA-GGATGGTTTTCAAGGG 232
||||||||||||| ||||||||||| ||||||||| ||| ||| |||||| |||||||||
Sbjct 259 CATAGAAGAAGATAAAGGTTTGCAACGGCTTGCTCTAGT-CAACGGATGGCTTTCAAGGG 317
Query 233 TAGAAGA-TATTGGGTCTC-AGGTCAATGATTTGCTTAAGGAGAAATC-AGCTGAAACTA 289
|| || | | ||| || | | |||| ||| ||||| ||| | || | | ||||||
Sbjct 318 TACAA-ATTGTTGAATC-CGAATTCAAGGATCTGCTTGAGGCTATGTCAATC-GAAACT- 373
Query 290 AG-AGATTGTGTCTTTTTGGATACTGTTCT-AGCAAGTGCATATCAAGCTGCGAGTATGG 347
| ||||||||||| |||||||| |||||| || | ||||||||||||| | | |||||
Sbjct 374 GGAAGATTGTGTCTATTTGGATATTGTTCTGAG-GATTGCATATCAAGCTACAATTATGG 432
Query 348 TAAGAAA-GT-ATCGAAGAAGTTGAAAGAAGTTAAAGAACTTCTATCT-AAAGGAGTTTT 404
| |||| || || |||||| ||| ||||||||||||||||||||||| ||| || |||
Sbjct 433 T-GGAAAGGTAAT-GAAGAATTTGGAAGAAGTTAAAGAACTTCTATCTAAAAAGA-ATTT 489
Query 405 TGAAGTGGTGGCGGAGAAAGTTCCTGCAGCAAAGGTGGAGAAGAAACAAATCCAAACCAC 464
||||||||||||| ||||| || | | | |||| |||||||| || || ||||||||
Sbjct 490 TGAAGTGGTGGCGCAGAAA-ATCAT--ACCTAAGGCAGAGAAGAAGCATATACAAACCAC 546
Query 465 AATTGGTTTGGATTCAATACTT-GAAAAGGCAT-GGAACAGCCTCATCA-ACAG-TGAAC 520
| ||||||||||| |||| || ||| | |||| |||| |||||||| | || | ||||
Sbjct 547 AGTTGGTTTGGATACAATGGTTGGAATA-GCATGGGAA-AGCCTCAT-AGAC-GATGAAA 602
Query 521 GAACAACTTTCGGTCTTTATGGTATGGGGGGAGTTGGCAAAACCACCCTCCTAGCTCTTA 580
|| ||| || ||||||||||||||||||||| | || |||||||||||| ||| |
Sbjct 603 TAAGAACCTTGGGTCTTTATGGTATGGGGGGAATAGGAAAAACCACCCTCTTAGAAAGTC 662
Query 581 TCAACAACAAATTTGTTCAAATGGTGGA-TGGATTTGATGTTGTGATATGGGTCGTGGTC 639
||||||||||||||||| || ||| || || ||||||||| ||||||||||| |||||
Sbjct 663 TCAACAACAAATTTGTTGAACTGG-AGAGTGAATTTGATGTAGTGATATGGGTTGTGGTA 721
Query 640 TCTAAAGA-TTTGCAAAATGGA-GGCATTC-AGAATCAGATTCTGGGAAGATTACGTCTT 696
|||||||| ||| | | |||| ||||||| || ||||||||||||| |||||||||| |
Sbjct 722 TCTAAAGACTTT-C-AGTTGGAGGGCATTCAAG-ATCAGATTCTGGGGAGATTACGTCCT 778
Query 697 GACAAGGAAT-GGAAACAAGAAACAGAAAAG-GAGAAAGCCTCTTC-CATATACAATATC 753
|||||||||| ||||| |||||||| |||| |||||||||| || |||| |||||| |
Sbjct 779 GACAAGGAATGGGAAA-GAGAAACAG-AAAGTAAGAAAGCCTC-TCTCATAAACAATAAC 835
Query 754 CTTACTAGAAAGAAATTTGTGCTGTTATTAGACGATTTATGGAGCGAGGTAGATCTGAA- 812
|||| ||||||||||||||| |||| || || ||| | |||||||| |||||||| ||
Sbjct 836 CTTAAGAGAAAGAAATTTGTGTTGTTGTTGGATGATCTCTGGAGCGAAGTAGATCT-AAT 894
Query 813 CGAGATAGGAGTTCCACCTCCAACTCGAGATAATGGATCAAAGATCGTTTTCACCACTCG 872
||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||| ||
Sbjct 895 TAAGATAGGAGTTCCACCTCCAAGTCGAGAAAATGGATCGAAGATAGTTTTCACCACACG 954
Query 873 TTCAAAGGAAGTTTGCAAAG-ACATGAAAGCCGATGATG-AAATGAAAGTTGAATGTTTG 930
|||||||||||||||| ||| |||||||||| || | | | || |||||||| ||||||
Sbjct 955 TTCAAAGGAAGTTTGC-AAGCACATGAAAGCTGA-CAAGCAGATAAAAGTTGACTGTTTG 1012
Query 931 TCACGGGATGAGGCATGGGTACTGTTTCGAAAT-A-TAGTTGGAGAAACCCCATTAAAGT 988
|||| ||||| || |||| | ||||||| | | | | |||||||| | | ||||| |
Sbjct 1013 TCACCAGATGAAGCGTGGGAATTGTTTCG-ACTCACT-GTTGGAGATATCATATTAAGGA 1070
Query 989 GTCATCAGGATATTCCCACACTAGCAAGAAAAGTGGCTG-AGAAATGTTGTGGCTTACCC 1047
| ||||| ||||||||| |||| ||||||| ||| |||| | ||||| |||||| ||
Sbjct 1071 GCCATCAAGATATTCCCGCACTTGCAAGAATAGTTGCTGCA-AAATGCCATGGCTTGCCA 1129
Query 1048 CTTGCACTCAATGTTATTGGCAAAGCCATGGCATGTAAAGAGGA-TGTCCACGAGTGGCG 1106
|||||||||||||| |||||||||||||||| ||||||||| || ||| || || |||||
Sbjct 1130 CTTGCACTCAATGTCATTGGCAAAGCCATGGTATGTAAAGA-GACTGTACAAGAATGGCG 1188
Query 1107 TCATGCGATTAATGTTCTCAACTCGTCTAGCCACGAGTTTCCGGGTATGGAAGAAAAG-A 1165
|||||||||||||||||| || ||| || ||||| ||||||| |||||||||| |||| |
Sbjct 1189 TCATGCGATTAATGTTCTGAATTCGCCTGGCCACAAGTTTCCAGGTATGGAAG-AAAGAA 1247
Query 1166 TTCTTTCCATTTTGAAGTTCAGTTATGATAGTTTAGGGGAT-GAAAAAGTCAAATTGTGC 1224
||||| ||||||||||||||||||||||||| ||| | || | ||| |||||||||||
Sbjct 1248 TTCTTCCCATTTTGAAGTTCAGTTATGATAGCTTAAAGAATGGTGAAA-TCAAATTGTGC 1306
Query 1225 TTCCTATATTGTTCTTTGTTTCCGGAAGATTATGAATTAAAGAAGGAGGAA-TTGATAGA 1283
||||||||||||||| ||||||| ||||||| |||| || ||||||| || ||||||||
Sbjct 1307 TTCCTATATTGTTCTCTGTTTCCTGAAGATTTTGAAATAGAGAAGGA-TAAGTTGATAGA 1365
Query 1284 ATATTGGATCTGCGAAGGATTTATAAAT-GGAAACATAGATGAAGATGGAAGTAAC-AAC 1341
||||||||| |||||||||| ||||||| | |||| | ||||||||||| || || |||
Sbjct 1366 ATATTGGATTTGCGAAGGATATATAAATCCG-AACAGATATGAAGATGGAGGT-ACTAAC 1423
Query 1342 CAAGGTCATGCTATTATTGG-TTCGTTAATTCGTGCACATCTATTGA-TGGATGGTCAAT 1399
|||||| ||| ||| ||||| || |||| ||||||||||| | |||| || || || ||
Sbjct 1424 CAAGGTTATGATATAATTGGCTT-GTTAGTTCGTGCACATTTGTTGATTGAAT-GTGAAC 1481
Query 1400 TTACA-ACGATGGTGAAAATGCATGATGTTTTACGCGAAATGGCCCTTTGGATATCTTCT 1458
| ||| || | || |||||||||||||| |||| || ||||| ||||||||| ||||
Sbjct 1482 TCACAGAC-AAAGTTAAAATGCATGATGTGATACGTGAGATGGCTCTTTGGATAAATTCT 1540
Query 1459 AACTTTGGAAAACAGGaa-aaa-aaGCTTTGTGTCAAATCTGGCGCGCAGT-TATGCAAT 1515
|||| ||||| ||| || ||| || ||||||| |||||||| || || | || | |
Sbjct 1541 GACTTCGGAAATCAGCAAGAAACAA--TTTGTGTGAAATCTGGTGCTCA-TGTACG-TCT 1596
Query 1516 -ATACCAAAGGACATCAACTGGGAAATTGTGAGA-AGGATCTCGTTGATGAGTAATCAGA 1573
|||||||| ||||||| ||||| ||||||||| | ||| || || || |||| ||||
Sbjct 1597 GATACCAAATGACATCAGTTGGGAGATTGTGAGACA-GATGTCTTTAATTAGTACTCAGG 1655
Query 1574 TTGCAG-AGATATCTTGCTGTCCTAACTGCCCCAATCTTTTGACCCTACTACT-CCGTAA 1631
||| || ||||| ||||| |||| ||||||||||| |||| |||||| |||| || | |
Sbjct 1656 TTG-AGAAGATAGCTTGCAGTCCCAACTGCCCCAACCTTTCAACCCTATTACTCCCAT-A 1713
Query 1632 TAAC-AGTTTGGTGGATATTTCTGGTGAATCCTTTCGT-TTTATGCCAGTCCTTGTTGTC 1689
|||| || |||||||||||||| | || || ||||| | ||||||||| ||||| |||
Sbjct 1714 TAACAAG-TTGGTGGATATTTCAGTTGGATTCTTTC-TGTTTATGCCAAAACTTGTGGTC 1771
Query 1690 TTGGATCTTTCGA-AGAACCATAGTCTTTA-TGGATTG-CGAGAAGAAATTTCCT-GCCT 1745
||||||||||| | | ||| |||| ||| || |||| || |||||||||| || |||
Sbjct 1772 TTGGATCTTTCTACA-AACTGGAGTC-TTATTGAATTGCCG-GAAGAAATTT-CTAACCT 1827
Query 1746 GA-GTTCCTTGCAATACCTCAATTTATCATC-CACATGGATAAAATCGTTACCAGTTGGT 1803
| | ||| ||||||| |||||||||||| | |||| ||||||||||| |||||||||||
Sbjct 1828 -AGGCTCCCTGCAATATCTCAATTTATCA-CTCACAGGGATAAAATCGCTACCAGTTGGT 1885
Query 1804 TTGAAGGGGTTGAGTAAACTAAT-AAGGTTGGATCTGGAGTTTACTTTTGGACTTGAAAG 1862
||||| |||||| |||||||| | ||| |||||||||| ||| || |||||| ||
Sbjct 1886 CTGAAGAAGTTGAGGAAACTAATCTA-CTTGAATCTGGAGTTCACTAATGTACTTGAGAG 1944
Query 1863 -CATTGCTGGGATAGGAACAAGC-TTACCAAATCTTCAAGTGTTGAAACTATTTCATTCC 1920
| ||| ||| |||| ||||| | ||||||||||| |||||||||||| ||||| ||||
Sbjct 1945 TC-TTGTTGGAATAGCAACAA-CTTTACCAAATCTGCAAGTGTTGAAATTATTTTATTCT 2002
Query 1921 CGTGTTGGTATTGAT-ACA-AGATTAATGGAAGAGCTACAAC-TTTTACAGGACTTAAAG 1977
| | || || ||||| ||| | ||| ||||| || ||||| | || | || |||| |||
Sbjct 2003 CTTTTTTGTGTTGATGACATA-ATT-ATGGAGGAACTACAGCGCTTGA-AGCACTTGAAG 2059
Query 1978 ATTTTAACAGCAAACGTAGAGGATG-CTTCGATTTTGGAAAGTATCCAAGGAGTAGAAGG 2036
||||||||||||| | ||||||||| | | |||||||||||| | |||||||| || |
Sbjct 2060 ATTTTAACAGCAACCATAGAGGATGCCAT-GATTTTGGAAAGGGTACAAGGAGTTGACCG 2118
Query 2037 ACTGGCGAGTAGTATTCGAGGTTTATGTCTACGGAATATGTTTGAAGAG-GTTGTAATAT 2095
| ||||||||||||||||||||||||||||| | || |||| | | || |||||||
Sbjct 2119 ATTGGCGAGTAGTATTCGAGGTTTATGTCTAAGAAACATGTCAGCACCTCGT-GTAATAT 2177
Query 2096 TAAACACGGTAGCTTTGGGTGGTCTTCGACGCCT-GGCTGTTCAGAACTCCAA-A-ATCT 2152
||||| |||||||| |||| ||||||| || || || || || || ||| | ||||
Sbjct 2178 TAAACTCGGTAGCTCTGGGAGGTCTTCAACAACTTGGAA-TTGTGAGCTGCAACATATCT 2236
Query 2153 TAGAGATAAATATAGATTGGGAAAACAAAGAAAGAGAAG-AGCTTCTATGTACAAGTTCT 2211
|||||| | ||||||||| || |||||||||| | | | | || || ||||||||||
Sbjct 2237 --GAGATAGAGATAGATTGGTTAAGCAAAGAAAGA-AGGGATCATCGATCTACAAGTTCT 2293
Query 2212 CTAGGCTTCAAGCACCTCTCCACTGTTTCTGTA-TACAGTTTGGAAGGTTCAAAAAACTT 2270
| |||||||||||| ||| ||| | || ||||| | | |||||| ||| ||| | ||
Sbjct 2294 CCAGGCTTCAAGCAACTCGCCAGTATTACTGTAAT-CGGTTTGGTAGGGCCAAGGGATTT 2352
Query 2271 GACCTGGCTGTTGTTCGCTCAAAATCTCA-GG-TAC-CTAACTGTA-TCGGATTCATCAT 2326
| | |||||||| || ||||||||||| | || || | || || | | ||||| ||
Sbjct 2353 GTCATGGCTGTTATTTGCTCAAAATCTGAAGGATATAC-AAGTGCAAT---ATTCACCAA 2408
Query 2327 GCA-TAGAAGAAATAATAAATTGGGAGCAGGGAAT-ATATATTAGCAATGTGTGTCCAGA 2384
|| ||||||||||||||||| | || | ||||| | ||||| ||| ||| || |||
Sbjct 2409 -CAATAGAAGAAATAATAAATAAGCAGAAAGGAATGAG-TATTACCAAAGTGCATCGAGA 2466
Query 2385 TATT-TTGGTTCCATTGGGGAAGCTAGAATCCCTT 2418
|||| ||| |||| || |||||||| |||||||||
Sbjct 2467 TATTGTTG-TTCCCTTTGGGAAGCTGGAATCCCTT 2500
> AT5G43740.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr5:17564738-17568802 FORWARD LENGTH=2866
Length=2866
Score = 1465 bits (793), Expect = 0.0
Identities = 1922/2443 (79%), Gaps = 174/2443 (7%)
Strand=Plus/Plus
Query 73 GATGGAAATTACATTCATTTGATGGAGGCTAATCTTGATGCTCTGCAGAAAACTATGCAA 132
||| |||| |||||||| |||||||| | ||||| ||||||||||||||||||||| ||
Sbjct 140 GATAGAAACTACATTCACATGATGGAGTCAAATCTCGATGCTCTGCAGAAAACTATGGAA 199
Query 133 GAGCTTGACGAGA-GG-CGTGATGATCTGTTAAGAAGAGTTTCCATAGAAGAAGATCAAG 190
|| ||| | || | || || ||||| |||||| ||||||||||||||||||||||| |||
Sbjct 200 GAACTT-AAGA-ATGGACGAGATGACCTGTTAGGAAGAGTTTCCATAGAAGAAGATAAAG 257
Query 191 GTTTGCAAAGGCTTGCTCAAGTCCAA-GGATGGTTTTCAAGGGTAGAAGA-TATTGGGTC 248
|||||||| | ||||||||||| ||| |||||| |||| |||||| || | | ||| ||
Sbjct 258 GTTTGCAACGACTTGCTCAAGT-CAATGGATGGCTTTCCAGGGTACAA-ATTGTTGAATC 315
Query 249 TC-AGGTCAATGATTTGCTTAAGGAGAAATC-AGCTGAAA-CTAAGAGATTGTGTCTT-T 304
| | |||| ||| ||||| ||| | || | | |||| | | ||||||||| || |
Sbjct 316 -CGAATTCAAGGATCTGCTTGAGGCTATGTCAATC-GAAACCGGA-AGATTGTGT-TTGT 371
Query 305 TTGGATACTGTTCT-AGCAAGTGCATATCAAGCTGCGAGTATGGT-AAGAAAGTATCGAA 362
| ||||| || ||| || | ||||||||||||| | | |||||| || || ||||||||
Sbjct 372 TGGGATATTGCTCTGAG-GATTGCATATCAAGCTACAATTATGGTGAA-AAGGTATCGAA 429
Query 363 GAAGTTGAAAGAAGTTAAAGAACTTCTATCTAAAGGAG-TTTTTGAAGTGGTGGCGGA-G 420
|| |||| |||||||||||||||||||||||||| || |||| ||| |||| ||| | |
Sbjct 430 GATGTTGGAAGAAGTTAAAGAACTTCTATCTAAAAAAGATTTTAGAA-TGGTCGCGCAGG 488
Query 421 AAAGTTCCTGCAGCA-AAGGTGGAGAAGAAACAAATCCAAACCACAATTGGTTTGGATTC 479
||| || | | || |||||||||||||| | |||||||||||| |||||||||| |
Sbjct 489 AAA-TT-AT--A-CATAAGGTGGAGAAGAAGCTTATCCAAACCACAGTTGGTTTGGA-T- 541
Query 480 AATACT--T-GAAAAGGCATGGAACAGCCTCATCAACAG-TGAACGAACAACTTTCGGTC 535
|| ||| | |||| ||| |||| |||||| || ||| | |||| | ||| || || |
Sbjct 542 AA-ACTGGTGGAAATGGCGTGGAGCAGCCTGATGAAC-GATGAAATAGGAACCTTGGGAC 599
Query 536 TTTATGGTATGGGGGGAGTTGGCAAAACCACCCTCCTAGCTCTTATCAACAACAAATTTG 595
||||||||||||||||||| || |||||||||||| ||| | |||||||||||||||
Sbjct 600 TTTATGGTATGGGGGGAGTAGGAAAAACCACCCTCTTAGAAAGTCTCAACAACAAATTTG 659
Query 596 TTCAAATGGTGGA-TGGATTTGATGTTGTGATATGGGTCGTGGTCTCTAAAGA-TTTGCA 653
|| || ||| || || ||||||||| ||||||||||| ||||| |||||||| ||| |
Sbjct 660 TTGAACTGG-AGAGTGAATTTGATGTAGTGATATGGGTTGTGGTATCTAAAGACTTT-C- 716
Query 654 AAATGGA-GGCATTC-AGAATCAGATTCTGGGAAGATTACG-TCTTGACAAGGAAT-GGA 709
| | || ||||||| || |||||||||||||||||||||| || ||||||||||| |||
Sbjct 717 AGTTCGAGGGCATTCAAG-ATCAGATTCTGGGAAGATTACGTTC-TGACAAGGAATGGGA 774
Query 710 AACAAGAAACAGAAAAG-GAGAAAGCCTCTTC-CATATACAATATCCTT-ACTAGAAAGA 766
|| |||||||| |||| |||||||||| || ||||||||||| |||| | |||||||
Sbjct 775 AA-GAGAAACAG-AAAGTAAGAAAGCCTC-TCTCATATACAATAACCTTGA-GAGAAAGA 830
Query 767 AATTTGTGCTGTTATTAGACGATTTATGGAGCGAGGTAGATCTGAAC-GAGATAGGAGTT 825
|||||||| |||| || || ||| | ||||| || |||||| || || |||||||||||
Sbjct 831 AATTTGTGTTGTTGTTGGATGATCTCTGGAGTGAAGTAGATATG-ACTAAGATAGGAGTT 889
Query 826 CCACCTCCAACTCGAGATAATGGATCAAAGATCGTTTTCACCACTCGTTCAAAGGAAGTT 885
||||||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||||
Sbjct 890 CCACCTCCAACTCGAGAAAATGGATCGAAGATTGTTTTCACCACTCGTTCAACGGAAGTT 949
Query 886 TGCAAAG-ACATGAAAGCCGATGATGAA-ATGAAAGTTGAATGTTTGTCACGGGATGAGG 943
||||| | |||||||||| || | | | || ||||||| |||||||| | ||||| |
Sbjct 950 TGCAA-GCACATGAAAGCTGACAA-GCAGATAAAAGTTGCTTGTTTGTCCCCAGATGAAG 1007
Query 944 CATGGGTACTGTTTCGAAATA-TAGTTGGAGAAACCCCATTAAAGTGTCATCAGGATATT 1002
| |||| | |||||||| || | |||||||| | | ||||| | | ||||| ||||||
Sbjct 1008 CGTGGGAATTGTTTCGACTTACT-GTTGGAGATATCATATTAAGGAGCCATCAAGATATT 1066
Query 1003 CCCACACTAGCAAGAAAAGTGGCTG-AGAAATGTTGTGGCTTACCCCTTGCACTCAATGT 1061
||| |||| ||||||| ||| |||| | ||||| |||||| || ||||||||||||||
Sbjct 1067 CCCGCACTTGCAAGAATAGTTGCTGCA-AAATGCCATGGCTTGCCACTTGCACTCAATGT 1125
Query 1062 TATTGGCAAAGCCATGGCATGTAAAGAGGA-TGTCCACGAGTGG-CGTCATGCGATTAAT 1119
||||||||||||||| |||||||||| | | | || || ||| | |||||||||||||
Sbjct 1126 CATTGGCAAAGCCATGTCATGTAAAGAA-ACTATACAAGAATGGTC-TCATGCGATTAAT 1183
Query 1120 GTTCTCAACTCGTCTAGCCACGAGTTTCCGGGTATGGAAGAAAAGA-TTCTTTCCATTTT 1178
||||| || ||| || ||||||||||||| ||||||||||||| || ||||| |||||||
Sbjct 1184 GTTCTGAATTCGGCTGGCCACGAGTTTCCAGGTATGGAAGAAA-GAATTCTTCCCATTTT 1242
Query 1179 GAAGTTCAGTTATGATAGTTTAGGGGA-TGAA-AAAGTCAAATTGTGCTTCCTATATTGT 1236
|||||||||||||||||| || | || || ||| |||||||||||||||||||||||
Sbjct 1243 GAAGTTCAGTTATGATAGCTT-GAAGAATGGTGAAA-TCAAATTGTGCTTCCTATATTGT 1300
Query 1237 TCTTTGTTTCCGGAAGATTATGAATTAAAGAAGGAGGAATTG-ATAGAATATTGGATCTG 1295
||| ||||||| ||||||| |||| || ||||||| || || |||||||| ||||| ||
Sbjct 1301 TCTCTGTTTCCTGAAGATTCTGAAATACCGAAGGAG-AAGTGGATAGAATACTGGATATG 1359
Query 1296 CGAAGGATTTATAAATGGAAACATAGATGAAGATGGAAGTAACAACCAAGGTCATGCTAT 1355
|||||||||||||||| ||||| | ||||||||||| ||| |||||| ||| ||| |||
Sbjct 1360 CGAAGGATTTATAAATCCAAACAGATATGAAGATGGAGGTACCAACCATGGTTATGATAT 1419
Query 1356 TATTGG-TTCGTTAATTCGTGCACATCTATTGATGGA-TGGTCAATTTACA-ACGATGGT 1412
||||| || |||| ||||||||||| | ||||| || || | || | ||| || | | |
Sbjct 1420 AATTGGCTT-GTTAGTTCGTGCACATTTGTTGATTGAATG-TGAACTCACAGACAACGTT 1477
Query 1413 GAAAATGCATGATGTTTTACGCGAAATGGCCCTTTGGATATCTTCTAACTTTGGAAAACA 1472
|||||||||||||| |||| || ||||| ||||||||| |||| |||| ||||||||
Sbjct 1478 -AAAATGCATGATGTGATACGTGAGATGGCTCTTTGGATAAATTCTGACTTCGGAAAACA 1536
Query 1473 GGaa-aaa-aaGCTTTGTGTCAAATCTGGCGCGCA-GTTATGCAAT-ATACCAAAGGACA 1528
|| ||| || || |||| |||||||| || || || | | | | ||||| || ||||
Sbjct 1537 ACAAGAAACAATCTGTGTG--AAATCTGGTGCTCATGT-ACGTA-TGATACCGAATGACA 1592
Query 1529 TCAACTGGGAAATTGTGAGAAGGATCTCGTTGA-TGAGTAATCAGATTGCAGA-GATATC 1586
|||| ||||| |||||||||| ||| || || | | ||| ||||||| ||| ||||||
Sbjct 1593 TCAATTGGGAGATTGTGAGAACGATGTCTTTTACTT-GTACTCAGATTA-AGAAGATATC 1650
Query 1587 TTG-CTGT-CCTAACTGCCCCAATCTTTTGACCCTACTACTCCGTA-ATAACAG-TT-T- 1640
||| | || || || |||||||| |||| ||||| || ||| || ||||||| || |
Sbjct 1651 TTGTC-GTTCCAAA-TGCCCCAACCTTTCAACCCTTTTAATCC-TAGATAACAGGTTGTT 1707
Query 1641 GGTGGATATTTCTGGT-GAATCCTTTCGTTTTATGCCAGTCCTTGTTGTCTTGGATCTTT 1699
|||| | ||||| | || || ||||| ||||||||| ||||| |||||||||||||
Sbjct 1708 GGTGAAAATTTCAAATAGATTC-TTTCGGTTTATGCCAAAACTTGTGGTCTTGGATCTTT 1766
Query 1700 C-GAAGAACCATAG-TCTTTATGGA-TTGC-GAGAAGAAATTTCCTG-CCTGAG-TTCCT 1753
| | | |||| | | |||| || | |||| | ||||||||||| | ||| || ||||
Sbjct 1767 CTGCA-AACC-TCGATCTT-ATTAAATTGCCG-GAAGAAATTTC-TAACCT-AGGTTCCC 1820
Query 1754 TGCAATACCTCAATTTATCA-TCCACATGGATAAAATCGTTACCAGTTGGTTTGAAGGGG 1812
||||||| |||||| ||||| || ||| ||||||||||| ||||||||||| ||||| |
Sbjct 1821 TGCAATATCTCAATATATCACTC-ACAGGGATAAAATCGCTACCAGTTGGTCTGAAGAAG 1879
Query 1813 TTGAGTAAACTAATA-AGGTTGGATCTGGAGTTTACTTTTGGACTTGAAAG-CATTGCTG 1870
||||| |||||||| | ||| |||||||||| ||| || || || || | ||| ||
Sbjct 1880 TTGAGGAAACTAATCTAC-TTGAATCTGGAGTTCACTGGTGTACATGGGAGTC-TTGTTG 1937
Query 1871 GGATAGGAACAAGCTTACCAAATCTTCAAGTGTTGAAACTATTTCATTCCCGTGTTGGTA 1930
|||||| | ||| |||||||||||| |||||||||||| | ||| ||||| ||||| |
Sbjct 1938 GGATAGCAGCAACCTTACCAAATCTGCAAGTGTTGAAATTCTTTTATTCCTGTGTTTATG 1997
Query 1931 TTGAT-ACAAGATTAATGGAAG-AGCTACAACTTTTACAGGACTTAAAGATTTTAACAGC 1988
||||| ||| ||||||| ||| | ||||| || || |||| ||||||||||||||
Sbjct 1998 TTGATGACAT-ATTAATG-AAGGAATTACAAGACTTGGAGCACTTGAAGATTTTAACAGC 2055
Query 1989 AAACGTAGAGGATG-CTTCGATTTTGGAAAGTATCCAAGGAG-TAGA-AGGACTGGCGAG 2045
||||||| |||||| | ||||||||||||| || ||||||| | || || | |||||||
Sbjct 2056 AAACGTAAAGGATGTCA-CGATTTTGGAAAGGATACAAGGAGAT-GACAG-ATTGGCGAG 2112
Query 2046 TAGTATTCGAGGTTTATGTCTACGGA-ATATGTTTGAAGAGGT--TGTAATATTAAACAC 2102
|||||||||| ||||||||||| | | |||||| || | | ||||||||||| |||
Sbjct 2113 TAGTATTCGAAGTTTATGTCTA-GAAGATATGTC--AACACCTCGTGTAATATTAAGCAC 2169
Query 2103 GGTAGCTTTGGGTGGTCTTCGACGCCTGGCTGTTCAGAACTCCAAAATCTTAGAGATAAA 2162
| ||||| |||| ||||||| || || || ||| || | ||| || | |||||||
Sbjct 2170 GATAGCTCTGGGAGGTCTTCAACAACTTGCAATTCTGATGTGCAACATATCCGAGATAAG 2229
Query 2163 TATAGATTGGGAAAACAAAGAAAGA-G--A------A-----G-AGCTTCT---ATGTAC 2204
||||||||||||| |||||||||| | | | | || |||| || |||
Sbjct 2230 GATAGATTGGGAAAGCAAAGAAAGAAGGGAGCTTTCACCAACGGAGATTCTTCCATCTAC 2289
Query 2205 AAGTTCTCTAGGCTTCAAGCACCTCTCCACTGTTTCTGTATAC-AGTTTGGAAGGTTCAA 2263
| |||||| |||||||||||| ||||||||||||| | || || |||| |||||| |||
Sbjct 2290 AGGTTCTCCAGGCTTCAAGCAACTCTCCACTGTTTATATAAACCAGTT-GGAAGGG-CAA 2347
Query 2264 AAA-ACTTGACCTGGCTGTTGT-TCGCTCAAAATCTCAGGTACCTA-AC-TGTA-TCGGA 2318
| | ||| | |||||||| | | ||||||||||| | | | ||| | ||| | ||
Sbjct 2348 AGGGATTTGTCATGGCTGTTATAT-GCTCAAAATCTAAAGAAACTAGAAGTGTGCT-GG- 2404
Query 2319 TTCATCATGCATAGAAGAAATAATAAATTGGGAGCAGGGAAT-ATATATTAGCAATGTGT 2377
| || || |||||||||||||||||| |||| | ||||| | |||||| ||| ||
Sbjct 2405 T-CACCACAAATAGAAGAAATAATAAATAAGGAGAAAGGAATGA-ATATTACCAAACTGC 2462
Query 2378 GTCCAGATATT-TTGGTTCCATTGGGGAAGCTAGAATCCCTTG 2419
|| ||||||| ||| ||||||| ||||| || ||| |||||
Sbjct 2463 ATCGAGATATTGTTG-TTCCATTTGGGAACCTGGAAGACCTTG 2504
> AT1G51480.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:19090847-19094306 REVERSE LENGTH=2826
Length=2826
Score = 1448 bits (784), Expect = 0.0
Identities = 1748/2197 (80%), Gaps = 131/2197 (6%)
Strand=Plus/Plus
Query 58 GGCTGCTTGTTTGGTGATGGAAATTACATTCATTTGATGGAGGCTAATCTTGATGCTCTG 117
|||||||| ||| | ||| |||| |||||||| ||||||||| ||||| |||| ||||
Sbjct 316 GGCTGCTTTTTTAGCGATAGAAACTACATTCACAAGATGGAGGCAAATCTCGATGATCTG 375
Query 118 CAGAAAACTATGCAAGAGCTTGACGAGA-GG-CGTGATGATCTGTTAAGAAGAGTTTCCA 175
|| | ||||||| |||| ||| | || | || || |||||| ||||||||||||||||||
Sbjct 376 CACACAACTATGGAAGAACTT-AAGA-ATGGACGAGATGATTTGTTAAGAAGAGTTTCCA 433
Query 176 TAGAAGAAGATCAAGGTTTGCAA-AGGCTTGCTCAAGTCCAAGGATGGTTTTCAAGGGTA 234
||||||||||| ||||||||||| || |||||||||||| |||||||| |||||||||||
Sbjct 434 TAGAAGAAGATAAAGGTTTGCAACAG-CTTGCTCAAGTCAAAGGATGGATTTCAAGGGTA 492
Query 235 GAAGATA-TTGGGTCTCAGGT-CAATGATTTGCTTAAGGAGAAATCAGCTGAAACTAAGA 292
||| || ||| ||| || | ||| ||| ||||| |||| |||||| |||||||| ||
Sbjct 493 GAA-ATTGTTGAATCT-AGATTCAAGGATCTGCTTGAGGATAAATCAACTGAAACTG-GA 549
Query 293 -GATTGTGTCTT-TTTGGATACTGTTCT-AGCAAGTGCATATCAAGCTGCGAGTATGGTA 349
|||||||| || ||||||| |||||| || || ||||||||||||| | | ||||||
Sbjct 550 AGATTGTGT-TTGTTTGGATTTTGTTCTGAG-AATTGCATATCAAGCTACAATTATGGTG 607
Query 350 AGAAAG-TA-TCGAAGAAGT-TGAAAGAAGTTAAAGAACTTCTATCTAAAGGAGTTTTTG 406
| |||| || | |||||| | || |||||||||||||||||||||||||| | |||||
Sbjct 608 A-AAAGGTAAT-GAAGAA-TCTGGAAGAAGTTAAAGAACTTCTATCTAAAAAACATTTTG 664
Query 407 AAGTGGTGGCGGAGAA-AGTTCCTGCAGCAAAGGTGGAGAAGAAACAA-ATCCAAACCAC 464
||||||||||| | || | |||||| | | ||||| ||| |||| || ||||| |||||
Sbjct 665 AAGTGGTGGCGCATAAGA-TTCCTGTACCTAAGGTAGAGGAGAAG-AATATCCATACCAC 722
Query 465 AATTGGTTTGGATTCAATACTTGAAAAGGCATGGAACAGCCTCATCAAC-AGTGAACGAA 523
| |||||||| || |||| |||||| ||||||||| |||||||| || | |||| ||
Sbjct 723 AGTTGGTTTGTATGCAATGGTTGAAATGGCATGGAAAAGCCTCATGAATGA-TGAAATAA 781
Query 524 CAACTTTCG-GTCTTTATGGTATGGGGGGAGTTGGCAAAACCACCCTCCTAGCTCTT-AT 581
||| || | ||||| |||||||||||||||| || |||||||| ||| ||||| | ||
Sbjct 782 GAACCTT-GTGTCTTCATGGTATGGGGGGAGTAGGAAAAACCACACTCTTAGCT-TGCAT 839
Query 582 CAACAACAAATTTGTTCAAATGGTG-GATGGATTTGATGTTGTGATATGGGTCGTGGTCT 640
|||||||||||| ||| || ||| | | || ||||||||||||||||||||| ||||| |
Sbjct 840 CAACAACAAATTCGTTGAACTGGAGAG-TGAATTTGATGTTGTGATATGGGTTGTGGTAT 898
Query 641 CTAAAGA-TTTGCAAAATGGAGGC-ATTCA-GAATCAGATTCTGGGAAGATTACGTCTTG 697
||||||| ||| || || ||| ||||| || ||||||||| || ||||||||||| |
Sbjct 899 CTAAAGACTTT-CAGCTTG-AGGGTATTCAAGA-TCAGATTCTTGGTAGATTACGTCTCG 955
Query 698 ACAAGGAATGG-AAACAAGAAACAGAAAAGGAGAAAGCCTCT-TCCATATACAATATCCT 755
||||||||||| ||| | ||||||||||| |||||||||| || ||| |||||| |||
Sbjct 956 ACAAGGAATGGGAAAGA-GAAACAGAAAATAAGAAAGCCTCACTC-ATAAACAATAACCT 1013
Query 756 TACTAGAAAGAAATTTGTGCTGTTATTAGACGATTTATGGAGCGAGGTAGATCTGAACGA 815
|| ||||| |||||||||||||| || || ||| | ||||||||||||||||||||| |
Sbjct 1014 TAAGAGAAAAAAATTTGTGCTGTTGTTGGATGATCTCTGGAGCGAGGTAGATCTGAACAA 1073
Query 816 GATAGGAGTTCCACCTCCAACTCGAGATAATGGATCAAAGATCGTTTTCACCACTCGTTC 875
|||||||||||||||||||||||| || |||||| | ||||| |||||||||| |||||
Sbjct 1074 GATAGGAGTTCCACCTCCAACTCGTGAAAATGGAGCGAAGATAGTTTTCACCAAACGTTC 1133
Query 876 AAAGGAAGTTTGCAAAG-ACATGAAAGCCGATGATG-AAATGAAAGTTGAATGTTTGTCA 933
||||||||||| ||| | |||||||||| || ||| |||| |||||| |||||||||
Sbjct 1134 AAAGGAAGTTTCCAA-GTACATGAAAGCTGAC-ATGCAAATAAAAGTTTCTTGTTTGTCA 1191
Query 934 CGGGATGAGGCATGGGTACTGTTTCGAAATA-TAGTTGGA-GAAACCCCATTAAAGT-GT 990
| ||||| || |||| | ||||||||| || | |||| | || | ||||| | |
Sbjct 1192 CCAGATGAAGCGTGGGAATTGTTTCGAATTACT-GTTG-ATGATGTCATATTAA-GCAGC 1248
Query 991 CATCAGGATATTCCCACACTAGCAAGAAAAGTGGCTG-AGAAATGTTGTGGCTTACCCCT 1049
||| | |||||||| |||| ||||||| ||| |||| | |||||| |||||| || ||
Sbjct 1249 CATGAAGATATTCCTGCACTCGCAAGAATAGTTGCTGCA-AAATGTCATGGCTTGCCACT 1307
Query 1050 TGCACTCAATGTTATTGGCAAAGCCATGGCATGTAAAGAGGA-TGTCCACGAGTGGCGTC 1108
|||||||| ||| ||||| |||||||||||||||||||| | | | || || |||| ||
Sbjct 1308 TGCACTCATTGTCATTGGGGAAGCCATGGCATGTAAAGAG-ACTATACAAGAATGGCATC 1366
Query 1109 ATGCGATTAATGTTCTCAACTCGTCT--AG-CCACGAGTTTCCGGGTATGGAAGAAAAGA 1165
|||||||||||||||| || ||| || || |||| ||||||| ||||||||||||| ||
Sbjct 1367 ATGCGATTAATGTTCTGAATTCGCCTGCAGGCCACAAGTTTCCAGGTATGGAAGAAA-GA 1425
Query 1166 -TTCTT-TCCATTTTGAAGTTCAGTTATGATAGTTTAGGGGA-TGAA-AAAGTCAAATTG 1221
||||| || |||||||||||||||| ||||| || | || || ||| ||||||||
Sbjct 1426 ATTCTTCTCG-TTTTGAAGTTCAGTTACGATAGCTT-GAAGAATGGTGAAA-TCAAATTG 1482
Query 1222 TGCTTCCTATATTGTTCTTTGTTTCCGGAAGATTATGAATTAAAGAAGGAGGAA-TTGAT 1280
|| ||||||||||||||||||||||| ||||||| |||| || |||||||| || |||||
Sbjct 1483 TGTTTCCTATATTGTTCTTTGTTTCCTGAAGATTTTGAAATAGAGAAGGAG-AAGTTGAT 1541
Query 1281 AGAATATTGGATCTGCGAAGGATTTATAAATG-GAAACATAGATGAAGATGGAAGTAACA 1339
|||||| ||||| |||||||||| ||||||| ||| || | ||||||||||| ||| ||
Sbjct 1542 AGAATACTGGATTTGCGAAGGATATATAAATCCGAA-CAGATATGAAGATGGAGGTACCA 1600
Query 1340 ACCAAGGTCATGCTATTATTGG-TTCGTTAATTCGTGCACATCTATTGATGGA-TGGTCA 1397
|||||||| ||| ||| ||||| || |||| ||||||||||| | ||||| || || | |
Sbjct 1601 ACCAAGGTTATGATATAATTGGCTT-GTTAGTTCGTGCACATTTGTTGATTGAATG-TGA 1658
Query 1398 ATTTACAACGATGGTGAAAATGCATGATGTTTTACGCGAAATGGCCCTTTGGATATCTTC 1457
| | || || | || ||||||||| |||| |||| || ||||| ||||||||| |||
Sbjct 1659 ACTCACCACCAAAGTTAAAATGCATTATGTGATACGTGAGATGGCTCTTTGGATAAATTC 1718
Query 1458 TAACTTTGGAAAACAGGaa-aaa-aaGCTTTGTGTCAAATCTGGCGCGCA-GTTATGCAA 1514
| |||||||||||||| || ||| || || |||| |||||||| || || || | | |
Sbjct 1719 TGACTTTGGAAAACAGCAAGAAACAATCTGTGTG--AAATCTGGTGCTCATGT-ACGTA- 1774
Query 1515 T-ATACCAAAGGACATCAACTGGGAAATTGTGAGA-AGGATCTCGTTGATGAGTAATCAG 1572
| ||||| || |||||||| ||||| ||||| ||| | | | || || || |||| ||||
Sbjct 1775 TGATACCGAATGACATCAATTGGGAGATTGTAAGACAAG-TGTCTTTAATCAGTACTCAG 1833
Query 1573 ATTGCAGA-GATATCTTGCT-GT-CCTAACTGCCCCAATCTTTTGACCCTACTACTCC-G 1628
|||| ||| ||||||||| | || || || ||| |||| |||| |||||| |||||| |
Sbjct 1834 ATTG-AGAAGATATCTTG-TAGTTCCAAA-TGCTCCAACCTTTCAACCCTATTACTCCCG 1890
Query 1629 TAATAACA-GTTTGGTGGATATTTCTGGTGAATCCTTTC-GTTTTATGCCAGTCCTTGTT 1686
|| ||||| ||| |||| ||||||| | || || ||||| |||| |||||| |||||
Sbjct 1891 TA-TAACAAGTT-GGTGAATATTTCAGTTGGATTCTTTCTGTTT-ATGCCAAAACTTGTG 1947
Query 1687 GTCTTGGATCTTTCGA-AGAACCAT-AGTCTTTATGGA-TTGC-GAGAAGAAATTTCCTG 1742
|||||||||||||| | | ||| || |||||| || || || | | || |||||||| |
Sbjct 1948 GTCTTGGATCTTTCTACA-AAC-ATGAGTCTT-ATTGAATTACCG-GAGGAAATTTC-TA 2002
Query 1743 CCTGA-GTTC-CTTGCAATACCTCAATTTATCATCCACATGGATAAAATCGTTACCAGTT 1800
|| | |||| ||| ||||| || ||||||||| |||| ||||||||||| |||||| |
Sbjct 2003 ACTTATGTTCTCTT-CAATATCTTAATTTATCAAGCACAGGGATAAAATCGCTACCAGGT 2061
Query 1801 GGTTTGAAGGGGTTGAGTAAACTAATA-AGGTTGGATCTGGAGTTTACTTTTGGACTTGA 1859
||| ||||| |||||| |||||||| | ||| |||||||||| | || | ||||||
Sbjct 2062 GGTATGAAGAAGTTGAGGAAACTAATCTAC-TTGAATCTGGAGTTCAGTTATAAACTTGA 2120
Query 1860 AAG-CATTGCTGGGATAGGAACAAGCTTACCAAATCTTCAAGTGTTGAAACTATTTCATT 1918
|| | ||| ||| ||| | ||| |||||||||||| |||||||||||| ||||| |||
Sbjct 2121 GAGTC-TTGTTGGCATATCAGCAACCTTACCAAATCTGCAAGTGTTGAAATTATTTTATT 2179
Query 1919 CCCGTGTTGGTATTGAT-ACAAGATTAATGGAAGAGCTACAACTTTTACAGGACTTAAAG 1977
|| |||| || ||||| ||| ||||||||| || ||||||| | | |||| |||
Sbjct 2180 CCAATGTTTGTGTTGATGACAT-ATTAATGGAGGAACTACAACACATGGATCACTTGAAG 2238
Query 1978 ATTTTAACAGCAAACGTAGAGGATGCT-TCGATTTTGGAAAGTATCCAAGG-AGTAGAAG 2035
|||||||| | || | |||| ||||| | |||||||||||| || ||||| | | ||
Sbjct 2239 ATTTTAACGGTAACCATAGATGATGCCAT-GATTTTGGAAAGGATACAAGGTATT-GACC 2296
Query 2036 GACTGGCGAGTAGTATTCGAGGTTTATGTCTA-CGGAATATGTTTGAAGAG-GTTGTAAT 2093
|| ||||||||||||||||||||||||||||| | ||||||| | | || ||| |
Sbjct 2297 GATTGGCGAGTAGTATTCGAGGTTTATGTCTAACA-AATATGTCAGCACCTCGT-GTAGT 2354
Query 2094 ATTAAACACGGTAGCTTTGGGTGGTCTTCGACGCCTGGCTGTTCAGAACTCCAA-A-ATC 2151
||||| ||| |||| |||| ||||||| || || || ||| || || ||| | |||
Sbjct 2355 ATTAAGTACGACAGCTCTGGGAGGTCTTCAACAACTTGCAATTCTGAGCTGCAACATATC 2414
Query 2152 TTAGAGATAAATATAGATTGGGAAAA-CAAAGAAAGA 2187
| |||||||| || |||||| |||| ||||||||||
Sbjct 2415 T--GAGATAAAGATGGATTGG-AAAAGCAAAGAAAGA 2448
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126872198847
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5