BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg891511
Length=1875
Score E
Sequences producing significant alignments: (Bits) Value
AT5G41540.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 1319 0.0
AT5G40910.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 1158 0.0
AT4G14370.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 464 1e-129
> AT5G41540.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:16612659-16616063 REVERSE LENGTH=3117
Length=3117
Score = 1319 bits (714), Expect = 0.0
Identities = 1530/1914 (80%), Gaps = 96/1914 (5%)
Strand=Plus/Plus
Query 1 ATGGCTTCTTCTGCGACTCATGTTA-GAAGATATCATGTCTTCCCGAGCTTCCATGGCCC 59
|||||||||||| |||| || |||| ||| |||||||||||||||||||||||| ||| |
Sbjct 1 ATGGCTTCTTCTTCGACCCACGTTAGGAA-ATATCATGTCTTCCCGAGCTTCCACGGCTC 59
Query 60 GGACGTCCGTAGAACATTTCTCAGTCATTTACAG-CATCACTTTGCAAGCAAGGGAATCA 118
||||| ||||||| ||||||||||||||||| | ||||||||||| ||||||||||
Sbjct 60 AGACGTTCGTAGAAAATTTCTCAGTCATTTAC-GTTTTCACTTTGCAATCAAGGGAATCG 118
Query 119 CGGTGTTTAAAGATCAGGAGATCAAAAGAGGCCAGACGATTGGA-CTGGAACTCAAACAA 177
|| |||||||| || ||||| || ||||||||| ||| ||| || ||||| |||
Sbjct 119 TGGCATTTAAAGACCAAGAGATTGAACGAGGCCAGAGGATCGGACCT-GAACTGGTGCAA 177
Query 178 GCAATAAGAGAATCGAGGGTCTTGATCGTGGTGCTTTCAAAGAAGTATGCTTCTTCGAGC 237
|||||| ||||||| || || | | | |||||||| || ||||| || ||||||| |||
Sbjct 178 GCAATACGAGAATCTAGAGTGTCGCTGGTGGTGCTATCTAAGAATTACCCTTCTTCAAGC 237
Query 238 TGGTGTTTGGATGAATTGGTCGAAATATTGAAATGTAGAGAAGCTTGTGG-GAAGATAGT 296
|||||||| ||||||||||| ||||| || ||||| | ||||| | || | |||| ||
Sbjct 238 TGGTGTTTAGATGAATTGGTAGAAATCTTAAAATGCAAAGAAG-ATCAGGAGCAGATTGT 296
Query 297 GATGACGATTTTTTACGAAATTGATCCGTTC-CATGTTCGGAAACAGATTGGGGATTTTG 355
|||| | || ||||||||||| || ||| || |||| |||||||||| || ||||| |
Sbjct 297 GATGCCTATATTTTACGAAATCGACCCG-TCTGATGTACGGAAACAGAGCGGTGATTTCG 355
Query 356 GAAGGGC-TTTCCGGG-AAACTTGTTTCA-GCAAAACTAAGAAGGTGAGGCTGAAATGGA 412
||| ||| ||| ||| |||||||| | | | ||||||||| |||||| || || |||||
Sbjct 356 GAAAGGCGTTT--GGGAAAACTTGTGT-AGGTAAAACTAAGGAGGTGAAGCAGAGATGGA 412
Query 413 GCAAAGCTTTGACTGATGTC-TCAAGCATAGCAGGAGAACATTCTCTACGTTGGGA-AGA 470
||| ||||||||||| | | ||| ||||| |||||||||||||||| | ||| ||
Sbjct 413 CCAACGCTTTGACTGA-GGCGGCAAACATAGGAGGAGAACATTCTCTAAACT-GGACTGA 470
Query 471 TGAAGCTAAGATGATCGAAAAAATTGCT-GCTGATGTTTCAAACAAACTGAATGCT-ACA 528
||||||| ||||||| ||||| |||| | || |||||||||||||||||||||| | | |
Sbjct 471 TGAAGCTGAGATGATTGAAAAGATTG-TCGCAGATGTTTCAAACAAACTGAATG-TCATA 528
Query 529 CCATCGAA-GGATTTTGACGGGATGGTGGGAATGGAAGCGCACTTGA-GAAAGGTAAACG 586
||||| || ||||||||| | |||||||||| | || || ||||||| |||| | ||
Sbjct 529 CCATC-AAGGGATTTTGAAGAGATGGTGGGACTTGACGCTCACTTGAGGAAA-TTGGACT 586
Query 587 CTTAT-TTACACCTTGAGTGC-GATGGAGTGAAAATGATTGGAATTCAGGGTCCTGCGGG 644
||| | ||| | | | | | |||| |||||| |||||||||||| ||||||||| ||
Sbjct 587 CTT-TGTTATGTC-TCAATTCTGATGAAGTGAAGATGATTGGAATTTGGGGTCCTGCAGG 644
Query 645 TATTGGTAAGACTACAATTGCTAGAGCTTTGTTCAACCAGCTTTCTGCCAATTTTCAACT 704
|||||||||||||| |||||||||||||| | |||||| || ||| | ||||||||| |
Sbjct 645 AATTGGTAAGACTACCATTGCTAGAGCTTTATACAACCAACTCTCTACGAATTTTCAATT 704
Query 705 TAAATGTTTTATAGAG-AACCTCAAGGGAAGTTATGGGAGTGA-TGTTATTGATGACTAT 762
|||||| ||||| | | |||||||| ||||||||| ||| | || | ||||| |||||
Sbjct 705 TAAATGCTTTAT-GGGAAACCTCAAAGGAAGTTATAAGAG-CATTGGTGTTGATAACTAT 762
Query 763 GGTTCGAAGTTGTGTTTACAAAACCAACTTCTTTCCAAGATTTTGAACGAAAAGGATATG 822
| || ||||||| |||||||||||||||||| ||||||||||||||| |||| ||| ||
Sbjct 763 GATTGGAAGTTGAATTTACAAAACCAACTTCTGTCCAAGATTTTGAACCAAAATGATGTG 822
Query 823 ACGATAGATCATTTAGGTGCAATAAAGGAAAGGCTACTA-GACCAAAAAGTCCTTATAGT 881
| || |||||||||||| | |||||| || ||||| | || ||||||| ||||||||
Sbjct 823 AAGACAGATCATTTAGGGGGAATAAAAGACTGGCTA-GAGGATAAAAAAGTTCTTATAGT 881
Query 882 TCTTGACGATGTAGATGATCTTGAACAATTAGATGTC-TTGGCTAAAGAACCATCTTGGT 940
| |||| ||||| |||||||| || ||| || || | |||||||||||||| |||||||
Sbjct 882 TATTGATGATGTGGATGATCTAGAGCAACTA-TTGGCATTGGCTAAAGAACCTTCTTGGT 940
Query 941 TTGG-TCTAGGAAGTCGGATTTTTGTTACCACAGAAGAT-AGACAGA-TATTGAATG-CA 996
|||| || |||||||| || | ||||||||| ||||| | || | || |||| | ||
Sbjct 941 TTGGTTC-CGGAAGTCGAATCATCGTTACCACAAAAGATAAAAC-TATTA-TGAA-GACA 996
Query 997 CATTGGGT-AA--ACTA-TA--TCTACCATGTGGGTTATCCGTCTGAAGAA-GAAGCTCT 1049
| || ||| || || | | | |||||||| |||||||| | || || | ||||||
Sbjct 997 CTTTTGGTCAACGACAACAACTTTTACCATGTCGGTTATCCAAC-CAATAAGGTAGCTCT 1055
Query 1050 TGAGATCTTATGTCTATCTGCTTTTCAGAAAAATTCTCCACTGGTTGGTTTTGAAGAGCT 1109
||||||| | ||||| |||||||||||||||| || ||||| || |||||||||||||||
Sbjct 1056 TGAGATCCTCTGTCTGTCTGCTTTTCAGAAAAGTTTTCCACGGGATGGTTTTGAAGAGCT 1115
Query 1110 TGCaaaaaaaaTAACAAATTTTTGCGGTAGTCTTCCGTTAGGCC-TTCGTGTTGTGGGTT 1168
||||| |||| || | || |||| |||| |||||| ||| ||| ||| |||||||||||
Sbjct 1116 TGCAAGAAAAGTAGCTTATCTTTGTGGTAATCTTCCATTATGCCTTTC-TGTTGTGGGTT 1174
Query 1169 CATCTTTGCGTAGG-GAGAGCAGGCATGA-ATGGGAACGT-CAATTATCTAAACTAGAAA 1225
||||||||||| || |||||| |||| | |||| ||| | |||| || |||||||
Sbjct 1175 CATCTTTGCGT-GGCCAGAGCAAGCAT-AGATGGAAAC-TACAATCGGATAGGCTAGAAA 1231
Query 1226 CTAGTCTTGATAGAAAGATTGAAAACGTGTTAAGGGTCGG-ATATTG-CAAATTATCGAA 1283
|||||||||||||||||||||| |||| |||| |||| ||| || ||||| || ||
Sbjct 1232 CTAGTCTTGATAGAAAGATTGAGGACGTATTAA-AATCGGCATA-TGAAAAATTGTCCAA 1289
Query 1284 GAAAGATC-AGTCTCTATTTCTCCACATTGCTTTG-TTTTTCAACAATGA-A-ACTGTTG 1339
|||||| | ||| ||| ||||| |||||||| || || ||||||||| | | || ||
Sbjct 1290 GAAAGAGCAAGT-TCTCTTTCTTCACATTGC-ATGCTTCTTCAACAAT-ACATAC-ATT- 1344
Query 1340 A-TCATGTGACAACCATGCTAGCTGATAGTAACTTGGATATTAGCAACGGGATGAAGACC 1398
| | ||||| ||| | || |||||||||||| |||| | || || ||| ||||||||
Sbjct 1345 AGTGTTGTGAAAACGTTACTTGCTGATAGTAACCTGGACGTCAGAAATGGGTTGAAGACC 1404
Query 1399 CTAGCTGATAAATCTCTTGTGCATATATCTACCATAGGGTGGATAAAGATGCATCGTTTA 1458
||||| ||||||| |||||| |||||||| | | | ||||| ||||||| |||
Sbjct 1405 CTAGCCGATAAATGTCTTGTACATATATCCAGGGTTGACCGGATATTTATGCATCCTTTG 1464
Query 1459 CTCCAACAATTAGGGAGGCA-ATTAGTTCATGAACAGTCTGATGATCCCGGGAAACGTCA 1517
|| ||||||||||| || | | |||||| ||||||||| ||||| |||| |||||||||
Sbjct 1465 CTTCAACAATTAGGTAGATACA-TAGTTCTTGAACAGTCCGATGAGCCCGAGAAACGTCA 1523
Query 1518 GTTTTTAGTAGAGGCCGAAGAGATTCGTGATGTGCTGGCAAATGAAACAGGTACTGGATC 1577
|||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 1524 GTTTCTAGTAGAGGCCGAAGAGATTCGTGATGTGTTGGCAAATGAAACCGGTACTGGATC 1583
Query 1578 TGTCAT-AGGTATATCATTTGATATGTCCAAGATCAGCGAGTTCTCTATAACTGGGCGAG 1636
||| || ||| ||||||||||| ||||| ||| |||| ||||||||||||| ||||||||
Sbjct 1584 TGT-ATTAGGAATATCATTTGACATGTCTAAGGTCAGTGAGTTCTCTATAAGTGGGCGAG 1642
Query 1637 CCTTGGAAGGAATGCGTAATCTTCGATTCTTAAGAATCTATGGGAGATATTT-TAGCAAA 1695
|||| |||| ||||||||||||||||||||||||||| ||| ||||| | || ||| |||
Sbjct 1643 CCTTTGAAGCAATGCGTAATCTTCGATTCTTAAGAATTTATCGGAGA-AGTTCTAGTAAA 1701
Query 1696 GATGTTACGTTG-GGAATA-TCAGAGGACATGGAA-TATCTACCTCGTCTAAAGTTACTA 1752
| ||||| || ||| || | ||| |||||| || ||||||||||| |||| |||||||
Sbjct 1702 AAGGTTACATTACGGA-TAGT-AGAAGACATG-AAGTATCTACCTCGGCTAAGGTTACTA 1758
Query 1753 CATTGGGATTCAT-ACCCGAGAAAACGTCTTCCTCAAACATTTC-GACCGGAATGTCTCA 1810
|||||||| ||| |||| |||||| ||||||||| | ||| | | || ||| |||||
Sbjct 1759 CATTGGGAA-CATTACCCAAGAAAAAGTCTTCCTCGGAGATTCCAG-CCAGAACGTCTCG 1816
Query 1811 TCG-AGCTCCGTATGCAATTCAGCAAGCGCGAGAAGCTTTGGGGAGGAATCCAG 1863
| | | |||| ||||| | |||||| | |||||||| |||||||||||||||
Sbjct 1817 TGGTA-CTCCATATGCCACACAGCAATCTAGAGAAGCTCTGGGGAGGAATCCAG 1869
> AT5G40910.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:16395507-16399129 FORWARD LENGTH=3315
Length=3315
Score = 1158 bits (627), Expect = 0.0
Identities = 1487/1882 (79%), Gaps = 140/1882 (7%)
Strand=Plus/Plus
Query 28 AGATATCATGTCTTCCCGAGCTTCCATGGCCCGGACGTCCGTAGAACATTTCTCAGTCAT 87
||||| |||||||| |||| |||||||| || || |||||||| |||||||||||||
Sbjct 31 AGATACCATGTCTTTTCGAGTTTCCATGGACCAGATGTCCGTAGTGGATTTCTCAGTCAT 90
Query 88 TTACAGC-ATCACTTTGCAAGC-AAGGGAATCACGGTGTTTAAAGATCAGGAGATCAAAA 145
||||| | ||||||| | |||| ||||| ||||| ||| || ||||| |||||| | |
Sbjct 91 TTACA-CAATCACTTCGAAAGCAAAGGG-ATCACTCCGTTCAAGGATCAAGAGATCGAGA 148
Query 146 GAGGCCAGACGATTGGA-CTGGAACTCAAACAAGCAATAAGAGAATCGAGGGTCTTGATC 204
||||||| ||||| ||| || || |||| |||||| || |||||||| || |||| |||
Sbjct 149 GAGGCCATACGATCGGACCT-GAGCTCATACAAGCGATTAGAGAATCTAGAGTCTCGATT 207
Query 205 GTGGTGCTTTCAAAGAAGTATGCTTCTTCGAGCTGGTGTTTGGATGAATTGGTCGAAATA 264
|||||||||||| ||||||| ||||||||| ||||||| || ||||| ||||| |||||
Sbjct 208 GTGGTGCTTTCAGAGAAGTACGCTTCTTCGTGCTGGTGCTTAGATGAGTTGGTGGAAATC 267
Query 265 TTGAAATGTAGAGAAGCTT-GTGGG-AAGATAGTGATGACGATTTTTTACGAAA-TTGAT 321
||||| || | |||||||| | ||| ||| | |||||||| ||||||||| ||| |||||
Sbjct 268 TTGAAGTGCAAAGAAGCTTCG-GGGCAAG-TTGTGATGACTATTTTTTAC-AAAGTTGAT 324
Query 322 CCGTTCC-ATGTTCGGAAACAGATTGGG-GATTTTGGAAGGGCTTTCCGGGAAACTTGTT 379
||| ||| |||| ||||||||| ||| || || ||||| ||||| | |||| || |
Sbjct 325 CCG-TCCGATGTACGGAAACAG-CGGGGAGACTTCGGAAGTACTTTCAAGAAAACATG-T 381
Query 380 TCA-GCAAAA-CTAAGA-AGGTGAGGCTGAAATGGAGCAAAGCTTT-GACTGATGTCTCA 435
| | |||| || || | |||| || || ||||| ||||||||| || | || | ||
Sbjct 382 GAAGGGAAAACCT-GGATA-GTGAAGCAGAGATGGATCAAAGCTTTGGAAT-ATATAGCA 438
Query 436 AGCATAGCAGGAGAACATTCTCTACGTTGGG-AAGATGAAGCTA-AGATGATCGAAAAAA 493
| | |||| |||||||| |||||| | |||| | ||||||| | || ||||| |||| |
Sbjct 439 ACCGTAGCTGGAGAACACTCTCTAAGCTGGGCTA-ATGAAGC-AGAGTTGATCCAAAAGA 496
Query 494 TTGCTGCTGATGTTTCAAACAAACTGAATGC-TACACCATCGAAGGATTTTGACGGGATG 552
||||| | ||||||||||||||||| ||| | |||||| |||| ||||||||| ||||||
Sbjct 497 TTGCTACAGATGTTTCAAACAAACTTAAT-CTTACACCGTCGAGGGATTTTGAGGGGATG 555
Query 553 GTGGGAATGGAAGCGCACTTGAGAAAGGTAAACGCTTATTTACACCTTGAGTGCGATGGA 612
|||||| | ||||| || |||| ||| | || ||| |||| ||||||| | ||| ||
Sbjct 556 GTGGGACTTGAAGCTCATTTGACAAAACTGGACTCTTTTTTATGCCTTGAGAGTGAT-GA 614
Query 613 GTG-AAA-ATGATTGGAATTCAGGGTCCTGCGGGTATTGGTAAGACTACAATTGCTAGAG 670
|| ||| |||||||| ||| ||||||||| || |||||||||||||| ||||||||||
Sbjct 615 -TGTAAAGATGATTGGCATTTGGGGTCCTGCTGGAATTGGTAAGACTACCATTGCTAGAG 673
Query 671 CTTTGTTCAACCAGCTTTCTGCCAATTTTCAACTTAAATGTTTTATAGAGAACCTCAAGG 730
|||| || ||||| || ||| || ||||| |||| |||||||| | ||
Sbjct 674 CTTTATTTAACCAACTCTCTACCGGTTTTCGGCTTAGTTGTTTTAT---G--------GG 722
Query 731 GAAGTTATGGGAGTGATGTTATTGATGACTATGGTTCGAAGTTGTGTTTACAAAACCAA- 789
| | || |||||||| ||||||||| ||||||||||||||| ||||| |||
Sbjct 723 G-A-CCAT-----TGATGTTA---ATGACTATGATTCGAAGTTGTGTTTGCAAAA-CAAG 771
Query 790 CTTCTTTCCAAGATTTTGAACGAAAAGGATATGACGATAGATCATTTAGGTGCAA-TAAA 848
||||| ||||| ||||||||| |||||||||||| |||| |||||||||| |||| | ||
Sbjct 772 CTTCTGTCCAAAATTTTGAACCAAAAGGATATGAAGATACATCATTTAGGCGCAATTGAA 831
Query 849 GGAAAGGCTAC-TAGACCAAAAAGTCCTTATAGTTCTTGACGATGTAGATGATCTTGAAC 907
||| |||||| || |||||| ||| |||||||||||||| ||||| |||||||| || |
Sbjct 832 -GAATGGCTACATA-ACCAAAGAGTTCTTATAGTTCTTGATGATGTGGATGATCTAGAGC 889
Query 908 AATTAGATGTCTTGGCTAAAGAACCATCTTGGTTTGGTCTA-GGAAGTCGGATTTTTGTT 966
|| |||| || |||||||||||| |||||||| |||| | ||||||||||| |||||
Sbjct 890 AACTAGAGGTATTGGCTAAAGAAAGTTCTTGGTTCGGTC-ATGGAAGTCGGATCATTGTT 948
Query 967 ACCACAGAA-GATAGACAGATATTGAATGCACATTGGG-TAAACTATATCTACCATGTGG 1024
|| | || |||||| |||| ||||| ||||| |||| | ||| |||||||| ||||||
Sbjct 949 TCCTTA-AATGATAGAAAGATTTTGAAGGCACA-TGGGATCAACGATATCTACGATGTGG 1006
Query 1025 GTTATCCGTCTGAAGAAGAAGCTCTTGAGATCTTATGTCTATCTGCTTTTCAGA-AAAAT 1083
|| ||| || |||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct 1007 ATTTTCCATCCGAAGAAGAAGCTCTTGAGATCTTATGTCTATCTGCTTT-CAAACAAAAT 1065
Query 1084 TCTCCACTGGTTGGTTTTGAAGAGCTTGCaaaaaaaaTAACAAATTTTTGCGGTA-GTCT 1142
||||||| | ||||||||||||| ||||||||| | || | | ||||||||| | ||
Sbjct 1066 TCTCCACAAGATGGTTTTGAAGAGGTTGCAAAAAGAGTAGTAGAGCTTTGCGGTAAG-CT 1124
Query 1143 TCCGTTAGGCCTTCGTGTTGTGGGTTCATCTTTGCGTAGGGAGAGC-AGGCATGAATGG- 1200
||| || |||||||||||||||||||| ||||| | |||||||| ||| |||| |||
Sbjct 1125 TCCATTGGGCCTTCGTGTTGTGGGTTCTTCTTTTTATGGGGAGAGCGAGG-ATGAGTGGA 1183
Query 1201 GAACGTCAATTATCTA-AACTAGAAACTAGTCTTGATAG-AAAGATTGAAAACGTGTTAA 1258
||| |||||||| | || | ||||||| ||||||||| ||| ||||| || || || |
Sbjct 1184 GAAT-TCAATTATATGGAATT-GAAACTAATCTTGATAGGAAA-ATTGAGAATGTCTTGA 1240
Query 1259 GGGTCGGATATTG-CAAATTATCGAAGAAAGATCAGTCTCTATTTCTCCACATTGCTTTG 1317
| || |||||| | |||||| ||| || | |||| ||| | ||||| || ||||| | |
Sbjct 1241 GAGTGGGATAT-GACAAATTGTCGGAGCGACATCAATCTTTGTTTCTTCATATTGCAT-G 1298
Query 1318 -TTTTTCAACAATGAAACTGTTGATCATGTGACAACCATGCTAGCTGATAGTAACTT-GG 1375
||||||||| || ||| ||||||| |||||||||||||||| ||||| |||| ||| ||
Sbjct 1299 CTTTTTCAACCATAAAAGTGTTGATTATGTGACAACCATGCTCGCTGACAGTA-CTTTGG 1357
Query 1376 ATATTAGCAAC-GGGATGAAGACCCTAGCTGATAAATCTCTTGTGCATATATCTACCATA 1434
|| | | || ||| | |||||| |||| | ||||||||||||| | || ||| ||
Sbjct 1358 ATGTC-GAAAATGGGTTAAAGACCTTAGCCGCTAAATCTCTTGTG--TCTA-CTA--AT- 1410
Query 1435 GGGTGGATAAAGATGCA-TCGTTTACTCCAACAATTAGGG-AGGCAA-TTAGTTCATGAA 1491
|| ||||||| |||||| | || |||| |||||||| ||| || ||| || ||| | ||
Sbjct 1411 GGATGGATAACGATGCACT-GTCTACTACAACAATT-GGGTAGACAAGTT-GTTGTTCAA 1467
Query 1492 CAGTCTGATGATCCCGGG-AAACGTCAGTTTTTAGTAGAGGCCGAAGAGATTCGTGATGT 1550
||| | ||| |||||| |||||||||||||||||||||||| |||||||||| |||||
Sbjct 1468 CAGG--G-TGA-CCCGGGGAAACGTCAGTTTTTAGTAGAGGCCAAAGAGATTCGCGATGT 1523
Query 1551 GCT-GGCAAATGAAACAGGTACTGGATCTGTCATAGGTATATCATTTGATATGTCCAAGA 1609
|| |||||||||||||||||||| ||| |||||||||||||| ||||| || || ||||
Sbjct 1524 -CTTGGCAAATGAAACAGGTACTGAATCCGTCATAGGTATATCGTTTGACATTTCGAAGA 1582
Query 1610 TCAGCGA-GTTCTCTATAA-CTGGGCGAGCCTTGGA-AGGAATGCGTAATCTTCGA-TTC 1665
|| | || ||| ||||||| | | |||||||| | || |||||||||||| | | |||
Sbjct 1583 TC-GAGACGTTATCTATAAGCAAG-CGAGCCTTTAATAG-AATGCGTAATCT-CAAATTC 1638
Query 1666 TTAAGAAT-CTATGGGAGATATTTTAGCAAAGATGTTA-CGTTGGGAATATCAGAGGACA 1723
|||| | | |||| | || | || | ||||| | ||| | | ||||||||
Sbjct 1639 TTAA-ATTTCTAT---A-ATG-----G-AA-G-TGTTAGC-TTG----T-T-AGAGGACA 1678
Query 1724 TGGAATATCTACCTCGTCTAAAGTTACTACATTGGGATTCATACCCGAGAAAACGTCTTC 1783
||||||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||
Sbjct 1679 TGGAATATCTACCTCGTCTAAGGTTACTTTATTGGGGTTCATACCCGAGAAAAAGTCTTC 1738
Query 1784 CTCAAACATTTC-GACCGGAATGTCTCATCGAGCTCCGTATGCAATTCAGCAAGC-GCGA 1841
||| |||||| | || ||||||||| |||| ||| |||| |||||||||| | ||
Sbjct 1739 CTCTGACATTTAAG-CCAGAATGTCTCGTCGAACTCTATATGGGATTCAGCAAGTTG-GA 1796
Query 1842 GAAGCTTTGGGGAGGAATCCAG 1863
|||||| |||||||||||||||
Sbjct 1797 GAAGCTATGGGGAGGAATCCAG 1818
> AT4G14370.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr4:8279641-8283263 REVERSE LENGTH=3220
Length=3220
Score = 464 bits (251), Expect = 1e-129
Identities = 1289/1764 (73%), Gaps = 176/1764 (10%)
Strand=Plus/Plus
Query 130 GATCAGGAGATCAAAAGAGGCCAGACGATTGGA-CTGGAACTCA-AACAAG-CAATAAGA 186
|||||||||||| | ||| | || || || | | || | |||| | ||| || ||||
Sbjct 10 GATCAGGAGATCGAGAGAAGTCAAACCATCGCACCT-GCTCTCATTA-AAGCCATTAAG- 66
Query 187 GAATCGAGGGTCTTGATCGTGGTGCTTTCAAAGAAGTATGCTTCTTCGAGCTGGTGTTTG 246
||||| || ||| ||| | |||| || ||||| ||||||||||||||||||||||||
Sbjct 67 GAATCAAGAATCTCAATCATCTTGCTATCGAAGAACTATGCTTCTTCGAGCTGGTGTTTG 126
Query 247 GATGAATTGGTCGAAATAT-TGAAATGTAGAG-AAGCTTGTGGGA-AGATAGTGATGACG 303
||||| ||| | || || | | || || | || ||||| ||||| | ||||||||||||
Sbjct 127 GATGAGTTGTTGGAGAT-TGTCAAGTGCA-AGGAAGCTA-TGGGACAAATAGTGATGACG 183
Query 304 ATTTTTTACGAAATTGATCCGT-TCCATGTTCGGAAACAGATTGGGGATTTTGGAAGGGC 362
| || |||| | | ||||| | | |||| |||||||| | || || || || ||| |
Sbjct 184 GTCTTCTACGGAGTAGATCCATCTG-ATGTGCGGAAACAAACAGGAGAATTCGGGAGGTC 242
Query 363 TTTCCGGGAAACTTGTT-TCAGCAAA-ACTAA-GAAGGTGAGGCTGAAA-TGGAG-CAAA 417
|||| ||||| |||| || | || || || || | ||||| |||| ||||| |||
Sbjct 243 TTTCAATGAAACGTGTTCTC-G-AAGTACGAAAGA-GAAGAGGC-GAAAATGGAGTCAA- 297
Query 418 GCTTTGA-CTGATGTCTCAAGCATAGCAGGAGAACA-TTCTCTACGTTGGGA-AGATGAA 474
||||||| | |||| || |||||| |||||||| ||| | | ||||| | |||||
Sbjct 298 GCTTTGAACC-ATGTGGGAAACATAGCTGGAGAACACTTC-CAAAACTGGGACA-ATGAA 354
Query 475 GCTAAGATGATCGAAAAAATTGCT-GCTGATGTTTCAAACAAACTGAATGCTACAC-CAT 532
| |||||||| ||||| ||| | | ||| ||||||||||||| ||| ||||| | |
Sbjct 355 TCAAAGATGATTGAAAAGATTTCAAGA-GATATTTCAAACAAACTAAATTCTACAATC-T 412
Query 533 CGA-AGGATTTTGACGGGATGGTGGGAATGGAAGCGCACTTG-AG-AAAGGTAA--AC-- 585
| | || ||||||||| ||||| ||| | ||||| |||||| || ||| | || ||
Sbjct 413 CTAGAG-ATTTTGACGATATGGTTGGACTTGAAGCACACTTGGAGGAAATG-AAGTACTT 470
Query 586 GCTTA--TTTACACCT-TGAGTGCGATGGAG-TGAAAAT-GATTGGAATTCAG-GGTCCT 639
| ||| |||| | | | || | |||||| | | || | |||||||| | ||||||
Sbjct 471 G-TTAGATTTAGAT-TATAAG-G--ATGGAGCT-ATGATAG-TTGGAATTT-GTGGTCCT 522
Query 640 GCGGGTATTGGTAAGACTACAATTGCTAGAGCTTTGTTCAACCAGCTTT-CTGCCAA-T- 696
|| || |||||||||||||| |||||||||||||| | | || ||| || || |
Sbjct 523 GCAGGCATTGGTAAGACTACTATTGCTAGAGCTTTAT--AT--AG-TTTACTTTTAAGTA 577
Query 697 -TTTCAA-CTTAAATGTTTTATAGAGAACCTCAAG-GGAAGTTATGGGAGTGATGTTATT 753
|||| | |||| |||||| | ||||| || | | ||||| || || | || ||
Sbjct 578 GTTTCCAGCTTAGTTGTTTTGTGGAGAATCTTA-GTGGAAGCGATAATAGAG--GTC-TT 633
Query 754 GATGACTATGGTTCGAAGTTGTGTTTACAAAACCAACTTCTTTCCAAGATTTTGAACGAA 813
|| || ||||||| ||| || |||||||| | ||||||||||| |||||||| ||| ||
Sbjct 634 GACGAGTATGGTTTTAAGCTGCGTTTACAAGAGCAACTTCTTTCAAAGATTTTAAACCAA 693
Query 814 AA-GGATATGACGATAGATCATTTAGGTGCAATA-AAGGAAAGGCTACTA-GACCAAAAA 870
|| || ||||| |||| | ||||||||||||||| ||| |||||||| | |||||||||
Sbjct 694 AATGG-TATGAGGATATACCATTTAGGTGCAATACAAG-AAAGGCTA-TGCGACCAAAAA 750
Query 871 GTCCTTATAGTTCTTGACGATGTAGA-TGATCTTGAA-CAATTAGATGTCTT-GGCTAAA 927
|| ||||| |||||||| ||||| || |||||| || |||||||| | ||| ||||||
Sbjct 751 GTGCTTATCGTTCTTGATGATGT-GAATGATCTA-AAGCAATTAGAGG-CTTTGGCTAAT 807
Query 928 GA-ACCATCTTGGTTTGGTC-TAGGAAGTCGGATTTTTGTTACCACAGAAGATAGACAGA 985
|| || | ||||||||||| | |||||| |||| |||| ||||||||||||| | |
Sbjct 808 GAGACTAG-TTGGTTTGGTCCT-GGAAGTAGGATCATTGTGACCACAGAAGATAAAGGGC 865
Query 986 TATTGAATGCA-CATTGGGTA--AACTATATCT-ACCATGTGGGTTATCCGTCTGA-AGA 1040
| ||| | ||| ||| || || ||| | | || ||||||| |||| ||| ||| | |||
Sbjct 866 TTTTGGA-GCAACAT-GG-TATCAACAAAA-CTTACCATGTAGGTTTTCCATCT-ATAGA 920
Query 1041 AGAAGCTCTTGAGATCTTATGTCTATCTGCTTTTCAGAAAAAT-TCTCCAC-TGGTTGGT 1098
|||||||||||||||||| ||| ||| ||||||| ||||||| ||||||| || | |||
Sbjct 921 AGAAGCTCTTGAGATCTTTTGTATATATGCTTTT-AGAAAAAGCTCTCCACCTGAT-GGT 978
Query 1099 TTTGAAGAGCTTGCaaaaaaaaTAACAAAT-TTTTGCGGTAGTCTTCCGTTAGGCCTTCG 1157
|| || ||||| |||| | | |||||||| |||| | || ||||| || || |||||
Sbjct 979 TTCAAAAAGCTTACAAAGAGAGTAACAAATGTTTTT-GATAACCTTCCATTGGGTCTTCG 1037
Query 1158 TGTTGTGGGTTCATCTTTGCGTAGGGAGAGCAGGCA--TGAATGGGAA-CGTCAATT--A 1212
||| ||||||||||||| || |||| || || | ||| |||||| | || ||| |
Sbjct 1038 TGTCATGGGTTCATCTTTACGC-GGGA-AGGGGGAAGATGAGTGGGAAGC-TCTATTGGA 1094
Query 1213 TCTAAACTAGAAACTAGTCTTGATAGAAAGATTGAAA-ACGTGTTAAGGGTCGGATATTG 1271
| | |||||||||||||| ||| |||| || || | | | |||| || || ||| |
Sbjct 1095 -C-AGGCTAGAAACTAGTCTAGATCGAAATATCGAGGGA-GCGCTAAGAGTTGGGTAT-G 1150
Query 1272 CAAA--TTATC-G-AAGAAAGATCA-GTCTCTATTTCTCCACATTGCTTTGTTTTTCAAC 1326
| | || | | ||||| || || | ||||||||||||||||||| | |||||||||
Sbjct 1151 -ATAGCTTG-CAGGAAGAA-GAACAAG-CTCTATTTCTCCACATTGCGGTCTTTTTCAAC 1206
Query 1327 -A-ATGAAACTGTTGATCATGTGACAACCATGCTAGCTGATAGTAACTTGGATATTA-GC 1383
| | ||| | ||| ||||||| | ||||| || || |||||||||||| | | ||
Sbjct 1207 TACAACAAA--GATGAGCATGTGATTGCTATGCTCGCAGACAGTAACTTGGATGTCAAGC 1264
Query 1384 AACGGGATGAAGACCCTAGCTGATAAATCTCTTGTGCATATATCTACCATAGGGTGGATA 1443
|| ||| | || | |||| | ||||||| || || ||| |||||||| | | ||| |
Sbjct 1265 AA-GGGTTAAAAATCCTAACCAATAAATCACTCGTATATAGATCTACCA--GTG-GGAAA 1320
Query 1444 A-AG-A-TGCATCGT-TTACTCCAACAATTAGGG-AGGCAATTAGTTCATGAACAGTCTG 1498
| || | |||| | ||||| |||||| | ||| || || | |||| || | |
Sbjct 1321 ATAGTAATGCA-CAAATTACTACAACAAGT-GGGTAGAAAAGCAATTCA--AAGA--CA- 1373
Query 1499 ATGATCCCGGGAAACGTCAGTTTTTAGTAGAGGCCGAA-GAGATTCGTGATGTGCTGGCA 1557
| || || |||||||||| | ||| |||| || | | |||||| || |||| || | |
Sbjct 1374 A-GAGCCTTGGAAACGTCACATCTTAATAGATGC-GCATGAGATTTGTTATGTTCTTG-A 1430
Query 1558 -AATGAAACAGGTACTGGATCTGTCAT-AGGTATATCATTTGATATGTCCAAGA-TCAGC 1614
||||| |||| |||| || ||| | | ||| ||||| |||||| || || ||| |
Sbjct 1431 GAATGATACAGATACTAGAGCTG-CTTTAGGCATATCGCTTGATACATCTG-GAATCAAC 1488
Query 1615 GA-GTTCTCTATAACTG-GGCGAGCCTTGGAAGGAATGCGTAATCTTCGATTCTTAAGAA 1672
| ||| || |||| || || |||| || || |||||||||||||||||||| ||||
Sbjct 1489 AAAGTTATC-ATAAGTGAGG-GAGCTTTCAAAAGAATGCGTAATCTTCGATTCCTAAGTG 1546
Query 1673 TCTA---TGGGAGATATTTTAGCAAAGATGTT-ACGTTGGGA-ATATCAGAGGACATGGA 1727
|||| | |||||| ||| ||| ||| | | || || | ||| | |||||| ||||
Sbjct 1547 TCTACAATACAAGATATGTTA--AAA-ATGATCAAGT-GG-ACATACCTGAGGACTTGGA 1601
Query 1728 ATATCTACCTCGTCTAAAGTTACTACATTGGGATTCATACCCGAGAAAA-CGTCTTCCT- 1785
| || ||||| |||| ||| || | ||||| |||||||||| || | |||||||
Sbjct 1602 GTTTCCACCTCATCTACGGTTGCTTCGGTGGGAAGCATACCCGAGTAATGC-TCTTCCTA 1660
Query 1786 CAAACATTTCGA-CCGGAATGTCT 1808
| | |||||| | || |||| |||
Sbjct 1661 CTA-CATTTC-ATCCAGAATATCT 1682
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92820807705
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5