BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg891584
Length=1284
Score E
Sequences producing significant alignments: (Bits) Value
AT3G10845.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) fami... 1563 0.0
AT5G41690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) fami... 444 1e-123
AT3G48840.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) fami... 394 1e-108
AT3G48830.1 | Symbols: | polynucleotide adenylyltransferase fa... 176 4e-43
AT1G45100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) fami... 130 4e-29
> AT3G10845.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:3394009-3397526 FORWARD LENGTH=1272
Length=1272
Score = 1563 bits (846), Expect = 0.0
Identities = 1162/1306 (89%), Gaps = 56/1306 (4%)
Strand=Plus/Plus
Query 1 ATGGCCAGTTCTAGCAAGGAAGTTAATTTATTTGGTAAGCGAAATCCGGACGATGATGAT 60
||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||
Sbjct 1 ATGGCCAGTTCTAGCAAGGAAGTTAATTTATGTGGTAAGAGAAATCCGGAAGATGATGAT 60
Query 61 TTGGAGACCAAACCGATTCTGAAGAAACATAA-G--GAGGAGAAG---GAGAAGACAACG 114
||||||||||||||| |||| ||||||||||| | ||||||||| ||| ||||| ||
Sbjct 61 TTGGAGACCAAACCGTTTCTCAAGAAACATAAGGACGAGGAGAAGAAAGAGGAGACACCG 120
Query 115 GAAGGACTTGCTGATAGTCTCCAGCACAAGTCTGATCAAGCTAATTTAATCTCACTGAAG 174
||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct 121 GAAGGACTTGCTGATAGCCTCCAGCACAAGTCTGATCAAGCTAATTTAATCTCTCTCAAG 180
Query 175 GAGGAGG-AA--ACAGTGGAAGGACTTGATGACACTCCCGATTTTGTTGAGGCACTGGAA 231
||||||| || || |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 181 GAGGAGGAAAGTACTGTGGAAGGACGTGATGACACTCCCGATTTTGTTGAGGCACTGGAA 240
Query 232 AAGAAGAATGGTGAATATTTGCTCCATCGCAAGATA-ATTCTCAATGTTGC-TAAGATA- 288
|||||| |||| |||| ||||||| |||||||||| || || || || || |||| ||
Sbjct 241 AAGAAGGATGGAGAATGTTTGCTCGATCGCAAGATTTAT-CTTAAAGT-GCCTAAGCTAA 298
Query 289 GCTTCTTCATTGCCTCTTCCTAAGTACGAAGACTGCCTTCGACGAGGAGAAGATGAGACA 348
||| |||||||| ||||||||| |||| |||||| ||||| |||| |||||||||||||
Sbjct 299 GCT-CTTCATTGACTCTTCCTACGTACCAAGACTTCCTTCCACGACAAGAAGATGAGACA 357
Query 349 CCTCCCG---ATTTCGCTGAGGAAGTTCTCTTTCTTGCCAATCTCTCTCCCCAAACTAAG 405
||||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 358 CCTCCCGCCGATTTTGCTGAGGAAGTTCTCTTTGTTGCCAATCTCTCCCCCCAAACTAAG 417
Query 406 ATATTAGATATCTTCGATTTCTG-CAAAGATGTTGGAGAAGTTGTCAGTGCTCGACTTAT 464
|||||||||||||||| |||||| ||| ||||||||||||||||| |||| |||||||||
Sbjct 418 ATATTAGATATCTTCGGTTTCTGTCAA-GATGTTGGAGAAGTTGTTAGTGTTCGACTTAT 476
Query 465 TGCAAACCATGAGGGCAAGCATGTGGGCTGTGCCTTTGTTGAGTTTCTTTCTGCTATCGA 524
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||| | |||
Sbjct 477 TGCAAACCATGAGGACAAGCCTGTGGGCTGTGCCTTTGTTGAGTTTCTTTCTGCCAACGA 536
Query 525 AGCAAATAAGGCGCTGGAAAAGAAGAATGGTGAATATTTGCACAATCATAAGATCTTTTT 584
|||||| |||| ||||||||| ||||||||||||||||| || |||||||||| ||||
Sbjct 537 AGCAAAGAAGGTGCTGGAAAACAAGAATGGTGAATATTTTCATGGTCATAAGATCATTTT 596
Query 585 GATGAAAGGACATGGTGAAACTCCCGATTTTGCTGAGCATGTTCGACTTATTGTCAACCA 644
||||| |||||||||||||||||||||||| ||||||||| ||||| ||||| |||||
Sbjct 597 GATGAGAGGACATGGTGAAACTCCCGATTTCGCTGAGCAT---CGACTAATTGTTAACCA 653
Query 645 CAATGGCAAGCATGTGGGCTGGGGATTTGTTGAGTTTGCTTCTAATGACGAAGCAGAGAA 704
|| |||||||||||||||| |||||||||||||||||||||| | | |||||||||||
Sbjct 654 CACTGGCAAGCATGTGGGCAAGGGATTTGTTGAGTTTGCTTCTGCTAAGGAAGCAGAGAA 713
Query 705 GGCGCTGGAGAAGAAGAACGGTGAATATTTGCAGGATGGCAAGATTTTTCTTGAAG-CGG 763
|||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||| |||
Sbjct 714 TGCGCTGGAAAAGAAGAAGGGTGAATATTTGCAGGATGGCGAGATTTTTCTT-AAGGCGG 772
Query 764 CTAAGATAGCTCCATTCCCTCCACCCAAGTACGAAGACTACCTTCGACAAGAAAGCCTTC 823
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 773 CTAACATAGCTCCATTCCCTCCACCCAAGTACGAAGACTACCTTGGACAAGAAAG----- 827
Query 824 AGATAGATGAAGATGGGGCAGTGGAAGGACTTGCTGAAACTCCCTATTTCGTTGAGGTAC 883
|||| || | || ||||||||||||||||||||||||||||||| ||||||| |
Sbjct 828 AGAT-GAGGCAG------CAGTGGAAGGACTTGCTGAAACTCCCTATTTTGTTGAGG-A- 878
Query 884 GTGAAGCAAGAAAAAAGACGCTCTTTGTTGCCAATCTCCCTCCTCA-AACTAATATACCA 942
| ||||||||||||||||| |||||| |||||||||||||| | ||||| ||||| |
Sbjct 879 ---A-GCAAGAAAAAAGACGCTTTTTGTTACCAATCTCCCTCCT-AGAACTAGTATAC-A 932
Query 943 AAG-ATCATGTATTTCTTCAAAGATGCTGGAGAAGTTGTTCGTGTTCGACTTATTGTTGA 1001
||| || ||||||||||| |||| || |||||||||||||||||||||||||||||
Sbjct 933 AAGGATGTTGTATTTCTTCCAAGA--CTTT-GAAGTTGTTCGTGTTCGACTTATTGTTGA 989
Query 1002 CCA-TAGGGGTAAGCATGTGGGCTGTGGCTATTTTGAGTTTGCTTCTGCTAATGAAGCAG 1060
||| | ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 990 CCAATCGGG-TAAGCATATGGGCTGTGGCTATTTTGAGTTTGCTTCTGCTAATGAAGCAG 1048
Query 1061 AGAAGGCTCTGGAACAGAAGAATGGTAAAAGTTTGCGCTATCATCATA-TCTTTCTTGA- 1118
||||||| |||||||||| |||||||||||||||||||||||| || | ||||||||||
Sbjct 1049 AGAAGGCGCTGGAACAGAGGAATGGTAAAAGTTTGCGCTATCA-CAAAATCTTTCTTGAG 1107
Query 1119 CGTGGCTGAGATAGCTCCATACCCTCTCCAACCCAAGTACAACCTTGTAGAGAAGCTTTG 1178
| |||||||||||||||||||||||||||||| || |||||| |||| ||||||||||||
Sbjct 1108 C-TGGCTGAGATAGCTCCATACCCTCTCCAACACATGTACAAGCTTGCAGAGAAGCTTTG 1166
Query 1179 GTACGAAGACTACCTTCTACGAGAACCGAATCTGAAGCAACAGAAGGAAAAATCCGACGG 1238
|||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||
Sbjct 1167 GTACGAAGACAACCTTCTACGAGAATCGAATCTGAAGCAACAGAAGGCAAAATCCAACGG 1226
Query 1239 ATTCTGCGGTAAGAAGATTATCTTCTCTTCCGGGGACGACTGCTAG 1284
|||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1227 ATTCTGCGGTAAGAAGATTACCTTCTCTTACGGGGACGACTGCTAG 1272
> AT5G41690.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr5:16670001-16674966 REVERSE LENGTH=2268
Length=2268
Score = 444 bits (240), Expect = 1e-123
Identities = 552/695 (79%), Gaps = 51/695 (7%)
Strand=Plus/Plus
Query 622 CATGTTCGACTTATTGTCAACCACA-ATGGCAAGCATGTGGGCTGGGGATTTGTTGAGTT 680
|||||||| |||||| | ||||||| | ||||||||||||||||| | ||||| |||||
Sbjct 1445 CATGTTCGGCTTATTCTAAACCACACA-GGCAAGCATGTGGGCTGTGCCTTTGTAGAGTT 1503
Query 681 TGCTTCTAATGACGAAGCAGAGAAGGCGCTGGAGAA-GAAGAACGGTGAATATTTGCAGG 739
|| |||| | |||||||| ||| |||| |||| || ||| ||||||||||||||| | |
Sbjct 1504 TGGTTCTGCTAACGAAGCAAAGATGGCGTTGGA-AACGAAAAACGGTGAATATTTGAACG 1562
Query 740 ATGGCAAGATTTTTCTTGAAGCGGCTAAGATAGCTCCAT----T---CCC------T-C- 784
|| |||||||||||||||||| ||||||||| | ||||| | ||| | |
Sbjct 1563 ATTGCAAGATTTTTCTTGAAGTGGCTAAGATGGTTCCATACCCTCCACCCAAGTATTGCA 1622
Query 785 --CA-CCCAA------GTACGAAGACTACCTTCGACAAGAAAGCCTTCAGATAGATGAAG 835
|| | ||| |||||||||||||||||||| ||||||||||| |||||| |||
Sbjct 1623 TACATCACAAGGTTTGGTACGAAGACTACCTTCGACGAGAAAGCCTTCTGATAGAAGAAA 1682
Query 836 ATGGGGCAGTGGAAGGACTTGCTGAAACTCCCTAT-TTCGTTGAGGTACGTGAAGCAAGA 894
||| | ||| ||||||||||| ||| |||||| | || ||||||| | || | ||||
Sbjct 1683 ATGAGACAGAGGAAGGACTTGATGACACTCCCGCTCTT-GTTGAGGAATTTGCCGTAAGA 1741
Query 895 AAAAAGACGCTCTTTGTTGCCAATCTCCCTCCTCA-AACTAATATACCAAAGATCATGTA 953
||||||||||||||||||||||||||| | || || |||||| ||| || | ||||| |
Sbjct 1742 AAAAAGACGCTCTTTGTTGCCAATCTCTCACC-CAGAACTAAAATATCACATATCATCAA 1800
Query 954 -TTTCTTCAAAGATGCTGGAGAAGTTGTTCGTGTTCGACTTATTGTTGACCATAGGGGTA 1012
||| || ||||||| || ||||||||||||||||||||||||||| |||| ||||||
Sbjct 1801 GTTTTTT-AAAGATGTTGCAGAAGTTGTTCGTGTTCGACTTATTGTAAACCACAGGGGTG 1859
Query 1013 AGCATGTGGGCTGTGGCTATT-TTGAGTTTGCTTCTGCTAATGAAGCAGAGAAGGCTCTG 1071
|||||||||||||||||| || ||||||||||||||| ||| |||||| ||||||| |||
Sbjct 1860 AGCATGTGGGCTGTGGCT-TTGTTGAGTTTGCTTCTGTTAACGAAGCACAGAAGGCGCTG 1918
Query 1072 GAACAGAAGAATGGT-AAAAGTTTGCGCTA-TCATCATATCTTTCTTGACGTGGCTGAGA 1129
|| ||| ||||||| |||| ||||||| | || | | || ||||||||||||| ||||
Sbjct 1919 CAAAAGATGAATGGTGAAAA-TTTGCGC-AGTCGTGAGATTTTTCTTGACGTGGTTGAGT 1976
Query 1130 TAGCTCCATACCCTCTCCAACCCAAGTACAACCTTGTAGAGAAGCTTTGGTACGAA-GAC 1188
|||||||||||||||||| |||||||||||||| || |||||| |||||| ||||| ||
Sbjct 1977 TAGCTCCATACCCTCTCCGACCCAAGTACAACCATGCAGAGAAACTTTGGCACGAACGAG 2036
Query 1189 TACCTTCTACGAGAACCGAATCTGAAGCAACA-GA-A-G--GAAAAATCCGACGGA-TTC 1242
| | || | ||| ||| | |||| || | || | | || | ||| || |||
Sbjct 2037 AAAGT-CTTCT-GAA--GAAACAGAAGGAATATGAGATGTTGAGCGAGAGGACCGAATTC 2092
Query 1243 TGCGGTAAGAAGATTATCTTCTCTTCCGGGGACGA 1277
||||||||||||||||||||||||| || |||||
Sbjct 2093 TGCGGTAAGAAGATTATCTTCTCTTACGACGACGA 2127
Score = 261 bits (141), Expect = 1e-68
Identities = 255/308 (83%), Gaps = 16/308 (5%)
Strand=Plus/Plus
Query 904 CTCTTTGTTGCCAATCTCCCTCCTCAAACTAATATACCAAAGATCAT-GTATTTCTTCAA 962
||||||||||||||||| ||||||||||||| ||| || | ||| | | ||||||||||
Sbjct 998 CTCTTTGTTGCCAATCTTTCTCCTCAAACTAAAATATCAGATATCTTCG-ATTTCTTCAA 1056
Query 963 -AGATGCTGGAGAAGTTGTTCGTGTTCGACTTATTGTTGACCATAG-GGGTAAGCATGTG 1020
| || |||||||||||| || |||||||||| || ||||| | ||||||||||||
Sbjct 1057 TTG-TGTTGGAGAAGTTGTAAGTATTCGACTTATGGTAAACCAT-GAAGGTAAGCATGTG 1114
Query 1021 GGCTGTGGCTATT-TTGAGTTTGCTTCTGCTAATGAAGCAGAGAAGGCTCTGGA-ACAGA 1078
|| | ||||| || ||||||||||||||||| | ||| || | ||||| ||||| | | |
Sbjct 1115 GGTTATGGCT-TTGTTGAGTTTGCTTCTGCTGACGAAACAAAAAAGGCACTGGAGA-ACA 1172
Query 1079 AGAATGGT-AAAAGTTTGCGCTATCATCATATCTTTCTTGACGTGGCTGAGATAGCTCCA 1137
|||||||| || | ||||| | ||||| | || ||| |||| |||||| ||| |||||||
Sbjct 1173 AGAATGGTGAATA-TTTGCACGATCATAAGATTTTTATTGATGTGGCTAAGACAGCTCCA 1231
Query 1138 TACCCTCTCCA--ACCCAAGTACAACCTTGTAGAGAAGCTTTGGTACGAAGACTACCTTC 1195
|| || ||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1232 TA-CC-CTCCAGGACCCAAGTACAACCTTGTAGAGAAGCTTTGTTACGAAGACTACCTTC 1289
Query 1196 TACGAGAA 1203
|||||||
Sbjct 1290 GACGAGAA 1297
> AT3G48840.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr3:18112721-18114070 REVERSE LENGTH=570
Length=570
Score = 394 bits (213), Expect = 1e-108
Identities = 355/420 (85%), Gaps = 23/420 (5%)
Strand=Plus/Plus
Query 792 GTACGAAGACTACCTTCGACAAGAAAGCCTTCAGATAGATGAAGATGGGGCAGTGGAAGG 851
|||||||||||||||||||||||||| || || |||||| ||||||| | ||||||||||
Sbjct 6 GTACGAAGACTACCTTCGACAAGAAAACCGTCTGATAGAAGAAGATGAGACAGTGGAAGG 65
Query 852 ACTTGCTGAAACTCCC---T---ATT-TCGTTGAGGTACG-TGAAGCAAGAAAAAAGACG 903
||||| ||| |||||| | ||| || |||||| | | || | |||||||||||||
Sbjct 66 ACTTGATGAGACTCCCGATTCCGATTATC-TTGAGG-AAGTTGCTGTAAGAAAAAAGACG 123
Query 904 CTCTTTGTTGCCAATCTCCCTCCT-CAAACT-AATATACCAAAGATCATGTATTTCTTCA 961
|||||| |||||||||||||| | ||| | || || ||| | ||||| |||||||||
Sbjct 124 CTCTTTATTGCCAATCTCCCT-TTGAAAAGTGAA-ATGCCACATATCATCAATTTCTTCA 181
Query 962 AAGATGCTGGAGAAGTTGTTCGTGTTCGACTTATTGTTGACCATAGGGGTAAGCATGTGG 1021
||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||
Sbjct 182 GAGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAGACCACAGGGGTAAGCATGTGG 241
Query 1022 GCTGTGGCTATT-TTGAGTTTGCTTCTGCTAATGAAGCAGAGAA-G-G-CTCTGGAACAG 1077
||||||||| || ||||||||||||||||| | ||||| |||| | | | |||||| ||
Sbjct 242 GCTGTGGCT-TTGTTGAGTTTGCTTCTGCTTACAAAGCAAAGAAGGCGCCGCTGGAAAAG 300
Query 1078 AAGAATGGTAA-AAGTTTGCGCTATCATCATATCT-TTCTTGACGTGGCTGAGATAGCTC 1135
||||| ||| ||| ||||| ||| | || | | ||||||||||||||||||||||||
Sbjct 301 AAGAA-CCTAAGAAGATTGCGGAATCGTTATGT-TGTTCTTGACGTGGCTGAGATAGCTC 358
Query 1136 CATACCCTCTCCAACCCAAGTACAACCTTGTAGAGAAGCTTTGGTACGAAGACTACCTTC 1195
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 359 CATACCCTCTCCGACCCAAGTACAACCTTGCAGAGAAGCTTTGGTACGAAGACTACCTTC 418
> AT3G48830.1 | Symbols: | polynucleotide adenylyltransferase
family protein / RNA recognition motif (RRM)-containing protein
| chr3:18103152-18110216 FORWARD LENGTH=2766
Length=2766
Score = 176 bits (95), Expect = 4e-43
Identities = 144/167 (86%), Gaps = 5/167 (3%)
Strand=Plus/Plus
Query 419 TCGATTTCTGCAAAGATGTTGGAGAAGTTGTCAGTGCTCGACTTATTGCAAACCATGAGG 478
||||||||| ||| ||||||||||||||||| |||| ||||||||||| || || |||
Sbjct 2216 TCGATTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGAGA 2275
Query 479 GCAAGCATGTGGGCTGTGCCTTTGTTGAGTTT-CTTTCTGCTAT-CGAAGCAAATAAGGC 536
| ||||||||||||| || ||||||||||||| | |||| || | | |||||| | |||
Sbjct 2276 GTAAGCATGTGGGCTATGGCTTTGTTGAGTTTGC-TTCTCCT-TGCTTAGCAAACATGGC 2333
Query 537 GCTGGAAAAGAAGAATGGTGAATATTTGCACAATCATAAGATCTTTT 583
||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 2334 GCTGGAAAAGAAGAATGGTGAATATTTGCACGATCATAAGAT-TTTT 2379
Score = 76.8 bits (41), Expect = 5e-13
Identities = 55/61 (90%), Gaps = 3/61 (5%)
Strand=Plus/Plus
Query 35 GTAAGCGAAATCCGGACGATGATGATTTGGAGACCAAACCGATTCTGAAGAAACATAAGG 94
|||||||| | || | || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 GTAAGCGAGAGCC--A-GAAGATGATTTGGAGACCAAACCGATTCTGAAGAAACATAAGG 1630
Query 95 A 95
|
Sbjct 1631 A 1631
Score = 63.9 bits (34), Expect = 4e-09
Identities = 58/70 (83%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 222 GGCACTGGAAAAGAAGAATGGTGAATATTTGCTCCATCGCAAGATAATTCTCAATGTTGC 281
||| |||||||||||||||||||||||||||| | ||| ||||| |||| ||| ||
Sbjct 2331 GGCGCTGGAAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTTTCTTGGTGTGGC 2390
Query 282 TAAGATAGCT 291
||||| ||||
Sbjct 2391 TAAGACAGCT 2400
> AT1G45100.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family
protein | chr1:17050631-17052189 FORWARD LENGTH=1494
Length=1494
Score = 130 bits (70), Expect = 4e-29
Identities = 148/183 (81%), Gaps = 15/183 (8%)
Strand=Plus/Plus
Query 397 CAAACTAAGATATT-AGATATCTTCGATTTCTGCAAAGATGTTGGAGAAGTTGTCAGTGC 455
||||| || || || ||||||| ||||||||| || ||||||||||||||||| | ||
Sbjct 220 CAAACAAAAAT-TTCAGATATCATCGATTTCTTCAGTGATGTTGGAGAAGTTGTTAATGT 278
Query 456 TCGACTTATTGC--AAACCATGA-GGGCAAGCATG-TGGGCTGTGCCTTTGTTGAG-TTT 510
|||| | |||| || ||| | ||| |||| || || | | || |||||||||| |||
Sbjct 279 TCGA-AT-TTGCTTAAGCCA-CACGGG-AAGC-TGTTGCGTTCTGGCTTTGTTGAGTTTT 333
Query 511 CTTTCTGCTA-TCGAAGCAAATAAGGCGCTGGAAAAGAAGAATGGTGAATATTTGCACAA 569
| |||||||| | || ||||| ||||| |||||||||||||||||||||||||||||| |
Sbjct 334 C-TTCTGCTAGT-GAGGCAAACAAGGCACTGGAAAAGAAGAATGGTGAATATTTGCACGA 391
Query 570 TCA 572
|||
Sbjct 392 TCA 394
Score = 67.6 bits (36), Expect = 3e-10
Identities = 58/68 (85%), Gaps = 4/68 (6%)
Strand=Plus/Plus
Query 221 AGGCACTGGAAAAGAAGAATGGTGAATATTTGCTCCATCGCAAGATAATTCTC--AATGT 278
||||||||||||||||||||||||||||||||| | ||| |||| | ||||| || ||
Sbjct 355 AGGCACTGGAAAAGAAGAATGGTGAATATTTGCACGATC--AAGAGATTTCTCTTAAAGT 412
Query 279 TGCTAAGA 286
|||| |||
Sbjct 413 TGCTCAGA 420
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63152285610
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5