BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg891830
Length=669
Score E
Sequences producing significant alignments: (Bits) Value
AT5G39110.1 | Symbols: | RmlC-like cupins superfamily protein ... 898 0.0
AT5G39100.1 | Symbols: GLP6 | germin-like protein 6 | chr5:1565... 876 0.0
AT5G39150.1 | Symbols: | RmlC-like cupins superfamily protein ... 856 0.0
AT5G39120.1 | Symbols: | RmlC-like cupins superfamily protein ... 850 0.0
AT5G39180.1 | Symbols: | RmlC-like cupins superfamily protein ... 850 0.0
> AT5G39110.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15657802-15658584 REVERSE LENGTH=669
Length=669
Score = 898 bits (486), Expect = 0.0
Identities = 611/672 (91%), Gaps = 6/672 (1%)
Strand=Plus/Plus
Query 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACCATATCAGCTTTGGTCATTTCCTTTGCC 60
|||||| || ||| ||||||| || |||||||| |||| |||||||||||||||||||||
Sbjct 1 ATGAGGTTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCC 60
Query 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGACCTCAAAAAT 120
|||||| |||||||||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 61 GAAGCTAATGATCCAAGTCCACTTCAAGACTTTTGTGTGGCCATTGGCGACCTCAAAAAT 120
Query 121 GGTGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180
||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||
Sbjct 121 GGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATTTC 180
Query 181 TTCTT--TGCAGGCCTCAA-CAAGGCAGGAAACACTACCAATAGAGTCAAATCCAACGTG 237
|| || | |||||||||| ||| ||||||| ||||| |||| ||||||||||||||||
Sbjct 181 TT-TTACT-CAGGCCTCAACCAA-GCAGGAACCACTAATAATAAAGTCAAATCCAACGTG 237
Query 238 ACAACGGTCAATGTCGACCAGATTCCCGGGTTAAACACATTGGGAATATCCTTGGTCCGC 297
||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct 238 ACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCCGC 297
Query 298 ATAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGATC 357
|||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 298 ATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGATC 357
Query 358 CTTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCTTCCAATCAAGACAATAAC 417
||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct 358 CTTGTTCTTGTTGAGGGAACATTATATGTTGGTTTTGTCTCTTCCAATCAAGACAACAAC 417
Query 418 CGTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATTGGAATGATC 477
||||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct 418 CGTTTATTCGCTAAAGTGCTGAACCCGGGCGACGTGTTTGTGTTCCCCATAGGAATGATC 477
Query 478 CATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTCAG 537
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 478 CATTTTCAAGTGAATATCGGGAAGACCCCTGCAGTGGCCTTTGCTGGACTAAGTAGTCAA 537
Query 538 AACGCTGGTGTTATCATGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATCCA 597
|| |||||||| |||| ||| ||||| |||||||| ||||||||||| || |||||||||
Sbjct 538 AATGCTGGTGTCATCACGATTGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCA 597
Query 598 GATATTCTCGCTCAGGCATTTCAGCTAGATGTCAACGTTGTCAAGGATCTTGAAGCCAAG 657
|||||| | |||||||| |||||| |||| ||||| ||||| || || ||||| ||||||
Sbjct 598 GATATTTTGGCTCAGGCGTTTCAGTTAGACGTCAATGTTGTTAAAGACCTTGAGGCCAAG 657
Query 658 TTTAAAAACTAA 669
||||||||||||
Sbjct 658 TTTAAAAACTAA 669
> AT5G39100.1 | Symbols: GLP6 | germin-like protein 6 | chr5:15653090-15654020
REVERSE LENGTH=835
Length=835
Score = 876 bits (474), Expect = 0.0
Identities = 606/671 (90%), Gaps = 4/671 (1%)
Strand=Plus/Plus
Query 1 ATGAGGGTTCCCATGTCTCTCGTCTTGATTACCATATCAGCTTTGGTCATTTCCTTTGCC 60
||||||||| ||| ||||||| || |||||||| |||| ||||||||||||||||||||
Sbjct 53 ATGAGGGTTTCCAAGTCTCTCATCCTGATTACCTTATCGGCTTTGGTCATTTCCTTTGCT 112
Query 61 GAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGACCTCAAAAAT 120
||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||||||||
Sbjct 113 GAAGCTTATGATCCAAGTCCACTTCAAGATTTCTGTGTGGCCATTGATGACCTCAAAAAT 172
Query 121 GGTGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATTTC 180
||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | |||
Sbjct 173 GGTGTTTTTGTGAATGGAAAGTTCTGTAAGGATCCCAAGCAAGCGAAGGCAGAATAATTC 232
Query 181 TTCTT-TGCAGGCCTCAACAAGGCAGGAAACACTACCAATAGAGTCAAATCCAACGTGAC 239
||||| | ||||||||||| ||||||||| ||||| |||| ||||| ||||||||||||
Sbjct 233 TTCTTCT-CAGGCCTCAACCAGGCAGGAAGCACTAATAATAAAGTCAGATCCAACGTGAC 291
Query 240 AACGGTCAATGTCGACCAGATTCCCGGGTTAAACACAT-TGGGAATATCCTTGGTCCGCA 298
||| |||||||||||||||||||| ||||||||||| | |||||||||||||||||||||
Sbjct 292 AACAGTCAATGTCGACCAGATTCCAGGGTTAAACAC-TATGGGAATATCCTTGGTCCGCA 350
Query 299 TAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGATCC 358
|||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 351 TAGACTATGCACCATATGGACAAAACCCGCCTCACACGCACCCTCGTGCTACTGAGATCC 410
Query 359 TTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCTTCCAATCAAGACAATAACC 418
|||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 411 TTGTCCTTATCGAGGGAACGTTATATGTTGGTTTTGTCTCTTCCAATCAAGACAATAACC 470
Query 419 GTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATTGGAATGATCC 478
|| ||||||||||||| ||| |||| || |||||||| ||||| ||||| ||||||||||
Sbjct 471 GTCTATTCGCCAAAGTTCTGTACCCGGGTGACGTGTTTGTGTTTCCCATAGGAATGATCC 530
Query 479 ATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTCAGA 538
|||||||||||||||||||||| || || || |||||||| |||||| | ||||||||||
Sbjct 531 ATTTTCAAGTGAATATCGGGAAAACGCCTGCGGTGGCCTTCGCTGGATTGAGTAGTCAGA 590
Query 539 ACGCTGGTGTTATCATGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATCCAG 598
| ||||||||||||| |||||| || |||||||| ||||||||||| || ||||||||||
Sbjct 591 ATGCTGGTGTTATCACGATCGCTGATACTGTGTTTGGGTCAACGCCTCCGATTAATCCAG 650
Query 599 ATATTCTCGCTCAGGCATTTCAGCTAGATGTCAACGTTGTCAAGGATCTTGAAGCCAAGT 658
||||| | ||||| |||||||| |||||||||| ||||| |||||||||| |||||||
Sbjct 651 ATATTTTAGCTCAAGCATTTCAATTAGATGTCAATATTGTCGAGGATCTTGAGGCCAAGT 710
Query 659 TTAAAAACTAA 669
||| |||||||
Sbjct 711 TTAGAAACTAA 721
> AT5G39150.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15669898-15670808 REVERSE LENGTH=795
Length=795
Score = 856 bits (463), Expect = 0.0
Identities = 606/674 (90%), Gaps = 13/674 (2%)
Strand=Plus/Plus
Query 1 ATGAGGGT-TCCCATGTCTCTCGTCTTGATTACCATATCAGCTTTGGTCATTTCCTTTGC 59
|||| ||| | ||||||||||| || |||| ||| ||||||||||||||| || ||||
Sbjct 20 ATGAAGGTGT-CCATGTCTCTCATCCTGATAACCTTATCAGCTTTGGTCA---CCATTGC 75
Query 60 CGAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGA-CCTCAAAA 118
| |||| | ||||||||||||||||||||||||||| |||||||||| ||| ||| ||||
Sbjct 76 CAAAGCATATGATCCAAGTCCACTTCAAGACTTCTGTGTGGCCATTGATGACCCT-AAAA 134
Query 119 ATGGTGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATT 178
||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||
Sbjct 135 ATGGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATT 194
Query 179 TCTTCTT--TGCAGGCCTCAA-CAAGGCAGGAAACACTACCAATAGAGTCAAATCCAACG 235
|||| || | |||||||||| ||| ||||||| ||||| || | |||| |||||||||
Sbjct 195 TCTT-TTCCT-CAGGCCTCAACCAA-GCAGGAATCACTAATAACAAAGTCCAATCCAACG 251
Query 236 TGACAACGGTCAATGTCGACCAGATTCCCGGGTTAAACACATTGGGAATATCCTTGGTCC 295
||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||
Sbjct 252 TGACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCC 311
Query 296 GCATAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGA 355
|||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 312 GCATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGA 371
Query 356 TCCTTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCTTCCAATCAAGACAATA 415
||||||||||||| || ||||| |||||||| |||||||||||||| ||||||||||| |
Sbjct 372 TCCTTGTTCTTGTTGAAGGAACATTATATGTTGGTTTTGTCTCTTCGAATCAAGACAACA 431
Query 416 ACCGTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATTGGAATGA 475
|||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct 432 ACCGTTTATTCGCCAAAGTGCTGAACCCGGGAGACGTGTTCGTGTTCCCCATAGGAATGA 491
Query 476 TCCATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTC 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 492 TCCATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTC 551
Query 536 AGAACGCTGGTGTTATCATGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATC 595
| || |||||||| |||| ||||||||| || ||||| || |||||||| || |||||||
Sbjct 552 AAAATGCTGGTGTCATCACGATCGCAGATACAGTGTTTGGATCAACGCCTCCGATTAATC 611
Query 596 CAGATATTCTCGCTCAGGCATTTCAGCTAGATGTCAACGTTGTCAAGGATCTTGAAGCCA 655
|||||||| | |||||||| |||||| |||||||||| |||||||| || ||||| ||||
Sbjct 612 CAGATATTTTGGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAAGACCTTGAGGCCA 671
Query 656 AGTTTAAAAACTAA 669
||||||||||||||
Sbjct 672 AGTTTAAAAACTAA 685
> AT5G39120.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15662705-15663486 REVERSE LENGTH=666
Length=666
Score = 850 bits (460), Expect = 0.0
Identities = 605/674 (90%), Gaps = 13/674 (2%)
Strand=Plus/Plus
Query 1 ATGAGGGTTC-CCATGTCTCTCGTCTTGATTACCATATCAGCTTTGGTCATTTCCTTTGC 59
|||| || || |||||||||| || |||||||| | | |||||||||| || ||||
Sbjct 1 ATGAAGG-TCTCCATGTCTCTTATCCTGATTACCTTCTGGGCTTTGGTCA---CCATTGC 56
Query 60 CGAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGA-CCTCAAAA 118
| |||| | ||||||||||||||||||||||||||| || ||||||| ||| ||| ||||
Sbjct 57 CAAAGCATATGATCCAAGTCCACTTCAAGACTTCTGTGTTGCCATTGATGACCCT-AAAA 115
Query 119 ATGGTGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATT 178
||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||
Sbjct 116 ATGGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATT 175
Query 179 TCTTCTT--TGCAGGCCTCAA-CAAGGCAGGAAACACTACCAATAGAGTCAAATCCAACG 235
|||| || | |||||||||| ||| ||||||| ||||| || | ||||||||||||||
Sbjct 176 TCTT-TTCCT-CAGGCCTCAACCAA-GCAGGAATCACTAATAACAAAGTCAAATCCAACG 232
Query 236 TGACAACGGTCAATGTCGACCAGATTCCCGGGTTAAACACATTGGGAATATCCTTGGTCC 295
||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||
Sbjct 233 TGACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCC 292
Query 296 GCATAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGA 355
|||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 293 GCATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGA 352
Query 356 TCCTTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCTTCCAATCAAGACAATA 415
||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||| |
Sbjct 353 TCCTTGTTCTTGTTGAAGGAACGTTATATGTTGGTTTTGTCTCTTCGAATCAAGACAACA 412
Query 416 ACCGTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATTGGAATGA 475
|||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct 413 ACCGTTTATTCGCCAAAGTGCTGAACCCGGGAGACGTGTTCGTGTTCCCCATAGGAATGA 472
Query 476 TCCATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTC 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 473 TCCATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTC 532
Query 536 AGAACGCTGGTGTTATCATGATCGCAGACACTGTGTTCGGGTCAACGCCCCCAATTAATC 595
| || |||||||| |||| ||||||||| |||||||| ||||||||||| || |||||||
Sbjct 533 AAAATGCTGGTGTCATCACGATCGCAGATACTGTGTTTGGGTCAACGCCTCCGATTAATC 592
Query 596 CAGATATTCTCGCTCAGGCATTTCAGCTAGATGTCAACGTTGTCAAGGATCTTGAAGCCA 655
|||||||| | ||||| || |||||| |||||||||| |||||||| || ||||| ||||
Sbjct 593 CAGATATTTTGGCTCAAGCTTTTCAGTTAGATGTCAATGTTGTCAAAGACCTTGAGGCCA 652
Query 656 AGTTTAAAAACTAA 669
||||||||||||||
Sbjct 653 AGTTTAAAAACTAA 666
> AT5G39180.1 | Symbols: | RmlC-like cupins superfamily protein
| chr5:15683464-15684353 REVERSE LENGTH=774
Length=774
Score = 850 bits (460), Expect = 0.0
Identities = 606/675 (90%), Gaps = 15/675 (2%)
Strand=Plus/Plus
Query 1 ATGAGGGT-TCCCATGTCTCTCGTCTTGATTACCATATCAGCTTTGGTCATTTCCTTTGC 59
|||| ||| | ||||||||||| || |||| ||| ||||||||||||||| || ||||
Sbjct 1 ATGAAGGTGT-CCATGTCTCTCATCCTGATAACCTTATCAGCTTTGGTCA---CCATTGC 56
Query 60 CGAAGCTTCTGATCCAAGTCCACTTCAAGACTTCTGCGTGGCCATTGGTGA-CCTCAAAA 118
| |||| | ||||||||||||||||||||||||||| |||||||||| ||| ||| ||||
Sbjct 57 CAAAGCATATGATCCAAGTCCACTTCAAGACTTCTGTGTGGCCATTGATGACCCT-AAAA 115
Query 119 ATGGTGTTTTTGTGAATGGTAAGTTCTGTAAGGATCCGAAGCAAGCGAAGGCAGAAGATT 178
||||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||
Sbjct 116 ATGGTGTTTTTGTGAATGGTAAGTTTTGCAAGGATCCAAAGCAAGCAAAGGCAGAAGATT 175
Query 179 TCTTCTT--TGCAGGCCTCAA-CAAGGCAGGAAACACTACCAATAGAGTCAAATCCAACG 235
|||| || | |||||||||| ||| ||||||| ||||| || | |||| |||||||||
Sbjct 176 TCTT-TTCCT-CAGGCCTCAACCAA-GCAGGAATCACTAATAACAAAGTCCAATCCAACG 232
Query 236 TGACAACGGTCAATGTCGACCAGATTCCCGGGTTAAACACATTGGGAATATCCTTGGTCC 295
||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||
Sbjct 233 TGACAACAGTCAATGTCGATCAGATTCCAGGGTTAAACACTTTGGGAATATCCTTGGTCC 292
Query 296 GCATAGACTATGCGCCTTATGGACAAAACCCGCCTCACACGCACCCTCGTGCCACTGAGA 355
|||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 293 GCATAGACTATGCGCCATATGGTCAAAACCCGCCTCACACACACCCTCGTGCCACTGAGA 352
Query 356 TCCTTGTTCTTGTCGAGGGAACGTTATATGTAGGTTTTGTCTCTTCCAATCAAGACAATA 415
||||||||||||| || ||||| |||||||| |||||||||||||| ||||||||||| |
Sbjct 353 TCCTTGTTCTTGTTGAAGGAACATTATATGTTGGTTTTGTCTCTTCGAATCAAGACAACA 412
Query 416 ACCGTTTATTCGCCAAAGTGCTGAACCCCGGCGACGTGTTCGTGTTCCCCATTGGAATGA 475
|||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct 413 ACCGTTTATTCGCCAAAGTGCTGAACCCGGGAGACGTGTTCGTGTTCCCCATAGGAATGA 472
Query 476 TCCATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTC 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 473 TCCATTTTCAAGTGAATATCGGGAAGACCCCCGCAGTGGCCTTTGCTGGACTAAGTAGTC 532
Query 536 AGAACGCTGGTGTTATCATGATCGCAGACACT-GTGTTCGGGTCAACGCCCCCAATTAAT 594
| || |||||||| |||| ||||||||| | | ||||| || |||||||| || ||||||
Sbjct 533 AAAATGCTGGTGTCATCACGATCGCAGATA-TAGTGTTTGGATCAACGCCTCCGATTAAT 591
Query 595 CCAGATATTCTCGCTCAGGCATTTCAGCTAGATGTCAACGTTGTCAAGGATCTTGAAGCC 654
||||||||| | |||||||| |||||| |||||||||| |||||||| || ||||| |||
Sbjct 592 CCAGATATTTTGGCTCAGGCGTTTCAGTTAGATGTCAATGTTGTCAAAGACCTTGAGGCC 651
Query 655 AAGTTTAAAAACTAA 669
|||||||||||||||
Sbjct 652 AAGTTTAAAAACTAA 666
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 32350790668
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5