BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg891841
Length=1437
Score E
Sequences producing significant alignments: (Bits) Value
AT5G39020.1 | Symbols: | Malectin/receptor-like protein kinase... 937 0.0
AT5G39000.1 | Symbols: | Malectin/receptor-like protein kinase... 531 9e-150
AT5G38990.1 | Symbols: | Malectin/receptor-like protein kinase... 444 1e-123
AT5G39030.1 | Symbols: | Protein kinase superfamily protein | ... 422 6e-117
> AT5G39020.1 | Symbols: | Malectin/receptor-like protein kinase
family protein | chr5:15616917-15619358 FORWARD LENGTH=2442
Length=2442
Score = 937 bits (507), Expect = 0.0
Identities = 660/734 (90%), Gaps = 10/734 (1%)
Strand=Plus/Plus
Query 614 TAAACGTTGGCGGAAAAATGGTCAATAATGTGGATGATTCAGGAATGTTCCGAAGGTGGC 673
||||||| |||||| |||| ||||| | || || ||||||||||||||||| ||||||
Sbjct 668 TAAACGTCGGCGGACAAATAGTCAACGAGGTCGACGATTCAGGAATGTTCCGGCGGTGGC 727
Query 674 TTCCGGATGATTCTTTCGGAAATTCAGGATCCATTGTGAATGTTCCGGATGTAAAGATC- 732
|| | ||||||||||| ||||| || |||||||||||||||||||||| ||||||||||
Sbjct 728 TTTCTGATGATTCTTTTGGAAACTCTGGATCCATTGTGAATGTTCCGGGTGTAAAGATCA 787
Query 733 ACATATACGGAGAAAACTCCGGCGTATGTTGCCCCATATGATGTGTACGCTACTAGTCGC 792
|| || |||||||| ||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 788 AC-TACACGGAGAAGACTCCGGCGTATGTTGCGCCGTATGATGTGTATGCTACTAGTCGC 846
Query 793 TCAATGGGCTACTCCACCAATTTGATTTTCAACCTGACGGGTATGTTCCTCACAGTTGAT 852
| |||||| |||||| ||| ||||| ||||| || ||||||||||||||||||||||||
Sbjct 847 TTAATGGGGAACTCCAGCAACTTGATGTTCAATCTAACGGGTATGTTCCTCACAGTTGAT 906
Query 853 GCCGGGTATAACTACCTCGTGAGGCTACATTTCTGTGAGACTCTTCCACAAGTGACTAAA 912
|| |||||||||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct 907 GCTGGGTATAACTACCTTGTGAGGCTACATTTCTGTGAGACTCTTCCACAAGTTACCAAA 966
Query 913 CCAGGCCAACGCGTCTTCTCCATCTTCGTCAAAGATAAGATGGCTAAGAAAGAGACGGAC 972
|||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 967 GCAGGCCAACGTGTCTTCTCCATATTCGTCGAAGATAAGATGGCTAAGAAAGAGACGGAC 1026
Query 973 GTGGTACGGTTGAGTGGTGGTCCTCGGATTCCAATGTATTTAGATTTTAGTGTGTATGTT 1032
||| | |||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1027 GTGATTCGGTTGAGCGGTGGTCCTCGGATTCCAATGTATTTAGATTTCAGTGTGTATGTT 1086
Query 1033 GGTTTCGAAAGTGGGATGAGGCAACCTGATCTACGACTTGACTTGCATGCTTTCAAGGAT 1092
||||||||||||||||||| |||||||| ||||||||||||||| | || |||||||
Sbjct 1087 GGTTTCGAAAGTGGGATGATACAACCTGAGCTACGACTTGACTTGGTTCCTCTCAAGGAC 1146
Query 1093 ACTAATCTAAC------CGACGCTATTCTGAGTGGTGTAGAGATTCTCAAGCTGAATGAT 1146
||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1147 ACTAATCAAACGTATTACGACGCTATTCTGAGTGGTGTGGAGATTCTCAAGCTGAATGAT 1206
Query 1147 TCTGAAGGTAATCTTGCCAGACCAAATCCAAAACTTATAGAATCTAAGGACTCAAGACCA 1206
||||| ||||||||||| |||||||||||| ||||| ||| ||||| |||||||| ||||
Sbjct 1207 TCTGATGGTAATCTTGCAAGACCAAATCCAGAACTTCTAGTATCTACGGACTCAACACCA 1266
Query 1207 AACGATTCTGATGT-ATCACCACCAATAAAAGGTAAGCCACATGTTTTGGTGATAATCCT 1265
| |||||| |||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1267 GATGATTCTAATGTTA-CACCACCAATAAAAGGTAAGCCACATGTTTTGGTGATAATCCT 1325
Query 1266 CATAGCCGTTGGTTCTGTAATTGGGCTAGCGACTTTCATTGTTATCATCATGTTGTTGAT 1325
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1326 CATAGTCGTTGGTTCTGTAATTGGGCTAGCGACTTTCATTGTTATCATCATGTTGTTGAT 1385
Query 1326 CCGTCGGAAGAAGA 1339
||||| || |||||
Sbjct 1386 CCGTCAGATGAAGA 1399
Score = 745 bits (403), Expect = 0.0
Identities = 548/618 (89%), Gaps = 10/618 (2%)
Strand=Plus/Plus
Query 1 ATGATCTGTTACGTTTTGTTTCTTTC-CTCTGTTCTCGTTTCTGTTACCGATGGAGTTAT 59
|||| |||| |||||||||||| ||| |||||||||||| |||||||| | ||||||||
Sbjct 1 ATGAACTGTAACGTTTTGTTTC-TTCTCTCTGTTCTCGTCTCTGTTACGGCTGGAGTTAC 59
Query 60 GGCGGCGT-TCGTGCCCACCGATGTTTTTCTCTTCAACTGCGGTGATACTTCCAACAACG 118
|||||||| | | || |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 60 GGCGGCGTACCAT-CCTACCGATGTCTTTCTCTTCAACTGCGGCGATACTTCCAACAACG 118
Query 119 TCGACAACAATGGCCGGAATTGGACAGCAG-AAGATCGGAAAATTCTGTCGTCAAATTTA 177
||||||||| ||||||||| ||||| | | ||| ||| ||||||||||||| ||||||
Sbjct 119 TCGACAACAGTGGCCGGAACTGGACGGTGGAAAG-TCGTCAAATTCTGTCGTCGAATTTA 177
Query 178 GTCAACGCTTCGTACACTTCAGAAGCATCATACCAAAAAACAGGAGTTTCTCGGATCCCG 237
||||||||||| | |||||||||||| |||||||||||| |||| || |||||||| |||
Sbjct 178 GTCAACGCTTCATTCACTTCAGAAGCGTCATACCAAAAAGCAGGGGTCTCTCGGATTCCG 237
Query 238 TACATGAAAGCTCGAATATTCCGATCTGAGTTCACTTACAGTTTTCCAGTCACTCCTGGC 297
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 238 TACATGAAAGCTCGAATATTCCGATCTGAGTTCACCTACAGTTTCCCAGTCACTCCCGGT 297
Query 298 TGGAAATTCCTCCGTTTATATTTTTACCCGACTCAATACAAATCCGGTTTTGACGCTGTT 357
| || ||| ||||| ||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct 298 TCGATATTTCTCCGGTTATACTTTTACCCGACTCAGTACAAATCCGGTTTTGACGCGGTT 357
Query 358 AACTCTTTCGTCTCCGTCAAAGTCAGCGGTTTCACTCTCTTGCGAAACTTCAACGCTGAT 417
||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 358 AACTCCTTCTTCTCCGTCAAAGTCAACGGTTTCACTCTCTTGCGAAACTTCAACGCTGA- 416
Query 418 AT-AACGGTACAAGCATCCATAACAG-AGTCAAGTTCTCTAATCAAAGAGTTTATCATTC 475
| |||||||||||| || || || | ||||| ||||||||||||||||||||||||||
Sbjct 417 CTCAACGGTACAAGCTTCAAT-ACCGTTGTCAAATTCTCTAATCAAAGAGTTTATCATTC 475
Query 476 CGGTTTACCAGACTTTGAATCTCACCTTCACACCGTCTGAGAATTCGTTAGCTTTCGTTA 535
||||| |||||||| |||||||||||||||| || || |||||| ||||||||||||||
Sbjct 476 CGGTTCACCAGACTCTGAATCTCACCTTCACTCCCTCCAAGAATTTGTTAGCTTTCGTTA 535
Query 536 ACAGAGTCGAGATTGTCTCCATGCCTGACCGGTTTTACTCAAAGGGAGGATTTGACGACG 595
|| || |||| || |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 536 ACGGAATCGAAATCGTCTCCATGCCTGACCGGTTTTACTCAAAGGGAGGATTTGACAACG 595
Query 596 TTGTAAGAAACGTCAGTA 613
|| |||||||||| ||||
Sbjct 596 TTTTAAGAAACGTTAGTA 613
> AT5G39000.1 | Symbols: | Malectin/receptor-like protein kinase
family protein | chr5:15611860-15614481 FORWARD LENGTH=2622
Length=2622
Score = 531 bits (287), Expect = 9e-150
Identities = 459/542 (85%), Gaps = 12/542 (2%)
Strand=Plus/Plus
Query 73 CCCACCGATGTTTTTCTCTTCAACTGCGGTGATACTTCCAACAACGTCGACAACAATGGC 132
||||||||||| ||||||||||||||||| || ||||| |||||||||||| | ||||
Sbjct 82 CCCACCGATGTCTTTCTCTTCAACTGCGGCGACACTTCAAACAACGTCGACGTTAGTGGC 141
Query 133 CGGAATTGGACAGCAGAAGATCGGAAAATTCTGTCGTCAAATTTAGTCAACGCTTCGTAC 192
|| || ||||| || ||| ||| ||||||||| ||||||||||||||||||||||||| |
Sbjct 142 CGAAACTGGACGGCGGAAAATCAGAAAATTCTATCGTCAAATTTAGTCAACGCTTCGTTC 201
Query 193 ACTTCAGAAGCATCATACCAAAAAACAGGAGTTTCTCGGATCCCGTACATGAAAGCTCGA 252
||| || |||| ||||||||| || |||||||||||| ||| |||||||||| |||||||
Sbjct 202 ACTGCACAAGCGTCATACCAAGAATCAGGAGTTTCTCAGATTCCGTACATGACAGCTCGA 261
Query 253 ATATTCCGATCTGAGTTCACTTACAGTTTTCCAGTCACTCCTGGCTGGAAA-TTCCTCCG 311
|||||||||||||||||||| |||||||||||||||||||| || | ||| || |||||
Sbjct 262 ATATTCCGATCTGAGTTCACCTACAGTTTTCCAGTCACTCCCGG-TTCAAATTTTCTCCG 320
Query 312 TTTATATTTTTACCCGACTCAATACAAATCCGGTTTTGACGCTGTTAACTCTTTCGTCTC 371
||||| ||||||||||| | |||| ||| || |||| || || || ||| ||||
Sbjct 321 GTTATACTTTTACCCGACCCGATACGGTTCCCAATTCAACGCCGTCAAATCCTTCTTCTC 380
Query 372 CGTCAAAGTCAGCGGTTTCACTCTCTTGCGA-AACTTCAACGCTGA-TATAACGGTACAA 429
||||||||||| ||| |||||||||||| | ||||||| |||||| | |||||||| ||
Sbjct 381 CGTCAAAGTCAACGGCTTCACTCTCTTG-AACAACTTCAGCGCTGACT-TAACGGTAAAA 438
Query 430 GCATCCATAACAG-AGTC-AAGTTCTCTAATCAAAGAGTTTATCATTCCGGTTTACCAGA 487
||||| | ||| | | | |||| | |||||||||||||||| |||||||||||||| |
Sbjct 439 GCATCTA-AACCGCAAACGGAGTT-TATAATCAAAGAGTTTATTATTCCGGTTTACCAAA 496
Query 488 CTTTGAATCTCACCTTCACACCGTC-TGAGAATTCGTTAGCTTTCGTTAACAGAGTCGAG 546
| ||||||||||| ||||| ||||| | || |||| ||||||||||||||| || |||||
Sbjct 497 CGTTGAATCTCACTTTCACGCCGTCTTTAG-ATTCCTTAGCTTTCGTTAACGGAATCGAG 555
Query 547 ATTGTCTCCATGCCTGACCGGTTTTACTCAAAGGGAGGATTTGACGACGTTGTAAGAAAC 606
||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 556 ATTGTCTCCATACCTAACCGGTTTTACTCAAAGGGAGGATTTGACGACGTTATAACTAAC 615
Query 607 GT 608
||
Sbjct 616 GT 617
> AT5G38990.1 | Symbols: | Malectin/receptor-like protein kinase
family protein | chr5:15608814-15611598 FORWARD LENGTH=2785
Length=2785
Score = 444 bits (240), Expect = 1e-123
Identities = 499/620 (80%), Gaps = 33/620 (5%)
Strand=Plus/Plus
Query 1 ATGATCTGTTACGTTTT-GTTTCTTTCCTCTGTTCTCGTTTCTGTTACCGATGGA-GTTA 58
||||||||| ||||||| | | ||| | || |||||||||| | || | || | |
Sbjct 11 ATGATCTGTCACGTTTTAG-TAATTTTCACTATTCTCGTTTCCGCCGTCG-TCGACGCAA 68
Query 59 TGGCGGCGT-TCGTGCCCACCGATGTTTTTCTCTTCAACTGCGGTGATACTTCCAACAAC 117
|||| ||| | | |||||| ||||| |||||| |||| ||||| ||||| |||||||||
Sbjct 69 CGGCGTCGTAT-GAGCCCACTGATGTCTTTCTCATCAATTGCGGCGATACCTCCAACAAC 127
Query 118 GTCGACAACAATGGCCGGAATTGGACAGCA-GAAG-ATCGGAAAATTCTGTCGTCAAATT 175
| ||| ||| ||||||||| ||||| | | | || ||| |||| || |||| || |||
Sbjct 128 ATGGACTACAGTGGCCGGAACTGGAC-G-ACGGAGAATCCGAAATTTATGTCATCGAATG 185
Query 176 TAG-T--CAACGCTTCGTACACTTCAGAAGCATCATACCAAAAAACA-GGAGTTTCTCGG 231
|| | | |||| |||| ||||||| || ||||||||| || || ||| || |||
Sbjct 186 CAGTTGACGACGCGTCGTTCACTTCATCTGCGTCATACCAAGAATCAGGGA-TTCCTC-A 243
Query 232 A-TCCCGTACATGAAAGCTCGAATATTCCGATCTGAGTTCACTTACAGTTTTCCAGTCAC 290
| | |||||| |||||||| | || ||||||| ||| ||||||||||||||||||||| |
Sbjct 244 AGTGCCGTACTTGAAAGCTAGGATTTTCCGATATGATTTCACTTACAGTTTTCCAGTCTC 303
Query 291 TCCTGGCTGGAAATTCCTCCGTTTATATTTTTACCCGACTCAATACAAATCCGGTTTTGA 350
||| ||||||||||||||||| ||||| ||||| ||||| | ||| ||||| ||| ||
Sbjct 304 TCCCGGCTGGAAATTCCTCCGGTTATACTTTTATCCGACCCGTTACGGATCCGATTTCGA 363
Query 351 CGCTGTTAACTCTTTCGTCTCCGTCAAAGTCAGCGGTTTCACTCTCTTGCGA-AACTTCA 409
||| ||||| || ||| |||||||||| |||| | ||||||||||||||| | ||||||
Sbjct 364 CGCCGTTAAATCCTTCTTCTCCGTCAACGTCAACCGTTTCACTCTCTTGC-ATAACTTC- 421
Query 410 ACGCTGATATAACGGTACAAGCATCCATAACAGAGTCAAGTTCTCTAATCAAAGAGTTTA 469
| | || | | | |||| |||||| | ||||||||||||||||||||||||||||
Sbjct 422 A-G-TG---T-A----A-AAGCTTCCATACCGGAGTCAAGTTCTCTAATCAAAGAGTTTA 470
Query 470 TCATTCCGGTTTACCAGACT-TTGAATCTCACCTTCACACCGTCTGAGAATTCGTTAGCT 528
|| |||||||| |||| ||| ||| ||||||| ||||| || ||| |||||| ||||||
Sbjct 471 TCGTTCCGGTTAACCAAACTCTTG-ATCTCACGTTCACGCCCTCTCCGAATTCATTAGCT 529
Query 529 TTCGTTAACAGAGTCGAGATTGTCTCCATGCCTGACCGGTTTTACTCAAAGGGAGGATTT 588
||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 530 TTCGTTAACGGAATCGAGATTATCTCCATGCCTGACCGGTTTTACTCAAAGGGAGGATTT 589
Query 589 GACGACGTTGTAAGAAACGT 608
||||||||||||||||||||
Sbjct 590 GACGACGTTGTAAGAAACGT 609
> AT5G39030.1 | Symbols: | Protein kinase superfamily protein
| chr5:15620066-15622486 FORWARD LENGTH=2421
Length=2421
Score = 422 bits (228), Expect = 6e-117
Identities = 449/552 (81%), Gaps = 29/552 (5%)
Strand=Plus/Plus
Query 78 CGATGTTTTTCTCTTCAACTGCGGTGATA-C--T-TCCAACAACGTCGACAACAATGGCC 133
||||||||||||| ||||||| || || | | | ||| | | |||||||| | || |
Sbjct 72 CGATGTTTTTCTCATCAACTGTGGAGAAACCGATGTCC--C--CTTCGACAACCACGGTC 127
Query 134 GGAA-TTGGACAGCA-GAAGATCGGAAAATTCTGT-CGTCA-AATTTAGTCAACGCTTCG 189
||| |||||| ||| || || ||| ||||| | || | |||| || |||||| |||
Sbjct 128 -GAACTTGGAC-GCAGGAGGAGAAGAATATTCT-TCCG-AAGAATTCAGACAACGCGTCG 183
Query 190 TACACTTCAGAAGCATCATACCAA-AA-AA-CA-GGAGTTTCTCGGA-TCCCGTACATGA 244
| | |||||| | ||||||| || || || || ||| || ||| | | || |||||||
Sbjct 184 TTCTCTTCAGTTGTATCATACAAAGAAGAATCAGGGA-TTCCTC-AAGTGCCTTACATGA 241
Query 245 AAGCTCGAATATTCCGATCTGAGTTCACTTACAGTTTTCCAGTCACTCCTGGCTGGAAAT 304
||||| || ||||||||||| ||||| ||||||||||||||| |||| ||||||||||
Sbjct 242 CTGCTCGGATTTTCCGATCTGATTTCACGTACAGTTTTCCAGTCTCTCCCGGCTGGAAAT 301
Query 305 TCCTCCGTTTATATTTTTACCCGACTCAA--TACAAATCCGGTTTTGACGCTGTTAACTC 362
||||||| ||||| |||||||| | ||| |||||||||||||||||||| ||||||||
Sbjct 302 TCCTCCGCTTATACTTTTACCCTA--CAAGTTACAAATCCGGTTTTGACGCCGTTAACTC 359
Query 363 TTTCGTCTCCGTCAAAGTCAGCGGTTTCACTCTCTTGCGAAACTTCAACGCTGATATAAC 422
||||||||||||| |||| | |||||||||||||| |||||||| ||| ||| ||||
Sbjct 360 CTTCGTCTCCGTCACCGTCAATGATTTCACTCTCTTGCAAAACTTCAGCGCCGATTTAAC 419
Query 423 GGTACAA-GCATCCATAACAGAGTCAAGTTCTCTAATCAAAGAGTTTATCATTCCGGTTT 481
||| || || || ||| |||| |||| |||||||||||||| || ||| |||||||||
Sbjct 420 AGTA-AAGGCTTCAATACCAGAATCAAAATCTCTAATCAAAGAATTCATCGTTCCGGTTT 478
Query 482 ACCAGACTTTGAATCTCACCTTCACACCGTCTGAGAATTCGTTAGCTTTCGTTAACAGAG 541
||| |||| |||||||||| |||| |||||| | |||||||||||||| |||||| ||
Sbjct 479 ACCTGACTCTGAATCTCACGTTCAGGCCGTCTAATAATTCGTTAGCTTTTGTTAACGGAA 538
Query 542 TCGAGATTGTCTCCATGCCTGACCGGTTTTACTCAAAGGGAGGATTTGACGACGTTGTAA 601
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 539 TCGAGATTGTCTCCATGCCTGACCGGTTTTACTCAAAGGGAGGATTTGACGACCTTATAA 598
Query 602 GAAACGTCAGTA 613
|||||| |||
Sbjct 599 CTAACGTCGGTA 610
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70832968995
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5