BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg891923

Length=408
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G38360.1 | Symbols:  | alpha/beta-Hydrolases superfamily pro...   484    2e-136


> AT5G38360.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein 
| chr5:15331711-15333625 REVERSE LENGTH=1282
Length=1282

 Score =  484 bits (262),  Expect = 2e-136
 Identities = 333/365 (91%), Gaps = 13/365 (4%)
 Strand=Plus/Plus

Query  1    ATGGCGTCTTCTTCTCTTACTTCATTCCCATGCCTATCCTCGCTGACGATTAA-GCCCAT  59
            |||||||||||||| ||| | || ||||||||||||||||  ||  | |  || ||||||
Sbjct  73   ATGGCGTCTTCTTCACTTCCCTCGTTCCCATGCCTATCCT-ACT-TC-A-AAATGCCCAT  128

Query  60   GGCAGCTCTCACCAATCCCCCAAGAACGAA-AACTCCATACGAA-CTGAAAAAGGGGCAA  117
             ||||||||||||||| |||| ||||| ||  | ||||||| || |||||||||||||||
Sbjct  129  AGCAGCTCTCACCAATTCCCCTAGAAC-AACGATTCCATAC-AACCTGAAAAAGGGGCAA  186

Query  118  AACCGTCTCTTCCACAAGCTTCCCTCTGGTCTAAAAATGGAGGTAATCGAACA-ACGAAG  176
            | ||| || || |||||||||||||||||||||||||||||||||||||| || | ||| 
Sbjct  187  ACCCGCCTTTTGCACAAGCTTCCCTCTGGTCTAAAAATGGAGGTAATCGAGCAGA-GAA-  244

Query  177  AA-GCAAATCCGAAAGAGAGAATCCACCATTGGTGTTTGTACATGGAAGCTATCACGCAG  235
            ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  245  AATCCAAATCCGAAAGAGAGAATCCACCATTGGTGTTTGTACATGGAAGCTATCACGCAG  304

Query  236  CTTGGTGTTGGGCTGAACATTGGTTACCTTTCTTCTCTTCTTCTGGGTTTGATTCTTATG  295
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  305  CTTGGTGTTGGGCTGAAAATTGGTTACCTTTCTTCTCTTCTTCTGGGTTTGATTCTTATG  364

Query  296  CTGTTAGTTTATTAGGTCAGGGTGAAAGTGATGAACCTTTGGGAACAGTTGCTGGAACAC  355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  365  CTGTTAGTTTATTAGGTCAGGGTGAAAGTGATGAACCTTTGGGAACAGTTGCTGGAACAC  424

Query  356  TTCAG  360
            |||||
Sbjct  425  TTCAG  429



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 19302815616


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5