BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891928 Length=651 Score E Sequences producing significant alignments: (Bits) Value AT5G38344.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 905 0.0 AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 614 4e-175 AT3G44670.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 416 1e-115 AT2G14080.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 403 9e-112 > AT5G38344.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain family protein | chr5:15325831-15326988 FORWARD LENGTH=1158 Length=1158 Score = 905 bits (490), Expect = 0.0 Identities = 599/650 (92%), Gaps = 13/650 (2%) Strand=Plus/Plus Query 1 ATGGATTCTGCTTTTCTCTCTAGTTTTTGTGTTGCTGCCATAACTTTCTTCACGATTTTG 60 ||||||||| ||||||||||| ||||||||| |||||||||||| |||||||| |||| Sbjct 120 ATGGATTCTTCTTTTCTCTCTGGTTTTTGTGCTGCTGCCATAACCTTCTTCACTCTTTTC 179 Query 61 GGTACAATATTTTTCATGTTTTATAAAAAAGTCAAATCCCATCAAGAAAACAAAACAATA 120 |||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 180 GGTACAATATATTTCATGTTTTATAGAAAAGGCAAATCCCATCAAGAAAACAAAACAATA 239 Query 121 GcttcttcttcttcttctttatctatttcatctacttcatcttcttTGTCTCGAAAACGG 180 | ||||||| | || ||||||||||||||||| |||||||||| ||||||||||| Sbjct 240 G---CTTCTTC-T-TT-AATATCTATTTCATCTACTCCATCTTCTTTACCTCGAAAACGG 293 Query 181 AAACACGATGTCTTCCCAAGCTTCCACGGGGCAGATGTTCGAAAAACATTTCTTGCTCAC 240 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 294 AAACACGATGTCTTCCCTAGCTTCCACGGGGCAGATGTTCGCAAAACCTTTCTTGCTCAC 353 Query 241 ATCCTAAAAGAGTTCAAA-GGAAAGGGAATCAG-TCCATTCATTGATAATGATATCGAGA 298 |||||||||||||||||| ||||| ||| || | |||||||||||||||||||||||||| Sbjct 354 ATCCTAAAAGAGTTCAAAGGGAAA-GGAGTC-GTTCCATTCATTGATAATGATATCGAGA 411 Query 299 GGAGCAAGTCTATCGGTCCTGAGCTCATAGAAGCTATCAGAGGATCAAAGATCGCGATCG 358 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 412 GGAGCAAGTCTATCGGTCCTGAGCTCATAGAAGCTATTAGAGGATCGAAGATCGCGATCG 471 Query 359 TCTTGCTCTCGAGGAACTACGCTTCTTCGTCTTGGTGCCTAAACGAGTTGGTGGAGATCA 418 |||||||||| |||||||| |||||||| || |||||| ||||||||||||||||||||| Sbjct 472 TCTTGCTCTCAAGGAACTATGCTTCTTCTTCGTGGTGCTTAAACGAGTTGGTGGAGATCA 531 Query 419 TGAAGTGTAGAGAAGAACTGGGTCAAACAGTGATGACCATTTTCTATGATGTTGATCCAA 478 |||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| Sbjct 532 TGAAGTGTAGAGAACAGTTGGGTCAAACAGTGATGACCATTTTCTATGACGTTGATCCAA 591 Query 479 CAGACGTAAAGAAGCAGACAGGAGATTTTGGGAAGGTCTTCAAGAAAACGTGTAAAGGTA 538 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 592 CAGACGTAAAGAAGCAGACAGGAGATTTTGGGAAGGTCTTCAAGAAAACTTGTAAAGGTA 651 Query 539 AAACCAAA-GAGGACATTAAGAGATGGCAAAACGTTTTGGAGTCTGTGGCAACAATCGCT 597 || ||||| ||||| ||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 652 AA-CCAAAAGAGGAAATTAAGAGATGGCAAAAAGTTTTGGAGGATGTGGCAACAATCGCT 710 Query 598 GGGGAGCATTCCCGTAACTGGTTAGCTTTCTTGATTTATACTT-GCCCTG 646 ||||||||||||||||||||||||||||||| |||||||| || || ||| Sbjct 711 GGGGAGCATTCCCGTAACTGGTTAGCTTTCTGGATTTATATTTTGCTCTG 760 > AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:15320507-15324061 FORWARD LENGTH=3180 Length=3180 Score = 614 bits (332), Expect = 4e-175 Identities = 529/618 (86%), Gaps = 37/618 (6%) Strand=Plus/Plus Query 1 ATGGATTCTGCTTTTCTCTCTAGTTTTTGTGTTGCTGCCATAACTTTCTTCACGATTTTG 60 ||||||||| ||||||||||||||||||||| | | ||||||| |||||||||| |||| Sbjct 1 ATGGATTCTTCTTTTCTCTCTAGTTTTTGTGCTACAGCCATAATTTTCTTCACGCTTTTC 60 Query 61 GGTACAATATTTTTCATGTTTTATAAAAAAGTCAAATCCCATCAAGAAAACAAAACAATA 120 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 61 GGTACAATATATTTCATGTTTTATAGAAAAGTCAAATCCCATCAAGAAAACAAAACAATA 120 Query 121 Gcttcttcttcttcttctttatctatttcatctactt-catcttcttTGTCTCGAAAACG 179 | ||||||||||| || || || ||| || ||||||||||||| | || Sbjct 121 G---------CTTCTTCTTTAGCTCTTCCAACTA-TTCCATCTTCTTTGTC-C-----CG 164 Query 180 GAAACACGATGTCTTCCCAAGCTTCCACGGGGCAGATGTTCGAAAAACATTTCTTGCTCA 239 ||| |||||||||| || || |||||||| ||||||||||| ||||| |||||| |||| Sbjct 165 AAAATACGATGTCTTTCCGAGTTTCCACGGAGCAGATGTTCGCAAAACCTTTCTTTCTCA 224 Query 240 CATCCTAAAAGAGTTCAAAGGAAAGGGAATCAG-TCCATTCATTGATAATGATATCGAGA 298 ||| ||||||||||||||| ||||||||||| | |||||||||||||||||||||||| | Sbjct 225 CATGCTAAAAGAGTTCAAACGAAAGGGAATC-GTTCCATTCATTGATAATGATATCGACA 283 Query 299 GGAGCAAGTCTATCGGTCCTGAGCTCATA-GAAGCTATCAGAGGATCAAAGATCGCGATC 357 ||||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||| Sbjct 284 GGAGCAAGTCTATTGGTCCTGAGCTC-GACGAAGCTATCAGAGGATCAAAGATCGCAATC 342 Query 358 GTCTTGCTCTCGAGGAACTACGCTTCTTCGTCTTGGTGCCTAAACGAGTTGGTGGAGATC 417 ||| ||||||| | |||||| |||||||| || ||||||||||||||||||||||||||| Sbjct 343 GTCATGCTCTCAAAGAACTATGCTTCTTCATCATGGTGCCTAAACGAGTTGGTGGAGATC 402 Query 418 ATGAAGTGTAGAGAAGAACTGGGTCAAACAGTGATGACCATTTTCTATGATGTTGATCCA 477 | ||| |||||| |||| || |||||||||||||||||||||||||| ||||| ||| Sbjct 403 ACGAAATGTAGAAAAGATTTGAATCAAACAGTGATGACCATTTTCTATGGCGTTGACCCA 462 Query 478 ACAGACGTAAAGAAGCAGACAGGAGATTTTGGGAAGGTCTTCAAGAA-AACGTGT-AAAG 535 ||||| |||||||||||||||||||| ||||||||||||||| | || ||| ||| |||| Sbjct 463 ACAGATGTAAAGAAGCAGACAGGAGAGTTTGGGAAGGTCTTCGA-AAGAACTTGTGAAAG 521 Query 536 GTAAAACCAAAGAGGA-CA--TTAAGAGATGGCA-A-AACGTTTTGGA-GTCTGTGGCAA 589 |||||| | ||||| || |||||| |||| | | || |||||||| | || ||||| Sbjct 522 -TAAAAC-A--GAGGAGCAGGTTAAGACATGG-AGAGAA-GTTTTGGATGG-TGCGGCAA 574 Query 590 CAATCGCTGGGGAGCATT 607 |||||||||| ||||||| Sbjct 575 CAATCGCTGGAGAGCATT 592 > AT3G44670.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr3:16216950-16221617 FORWARD LENGTH=3965 Length=3965 Score = 416 bits (225), Expect = 1e-115 Identities = 408/496 (82%), Gaps = 14/496 (3%) Strand=Plus/Plus Query 130 tcttcttctttatctatttcatctacttcatcttcttTGTCTCGAAAAC-GGAAACACGA 188 |||||| |||||||| || ||||| || || |||| ||||||| || | |||||||| | Sbjct 339 TCTTCTGCTTTATCTCTTCCATCTCCTCCAACTTCAGTGTCTCG-AATCTGGAAACACCA 397 Query 189 TGTCTTCCCAAGCTTCCACGGGGCAGATGTTCGAAAAA-CATTTCTT-GCTCACATCCTA 246 |||||||| |||||||||||||||||||||||||||| || ||||| | ||||||||| Sbjct 398 CGTCTTCCCGAGCTTCCACGGGGCAGATGTTCGAAAAACCA-TTCTTAG-TCACATCCTC 455 Query 247 AAAGAGTTCA-AAGGAAAGGGAA-TCAGTCCATTCATTGATAATGATATCGAGAGGAGCA 304 || ||||| || ||||||||| | | ||||| ||||||||| |||| |||||||| | Sbjct 456 GAATCGTTCAGAA-GAAAGGGAATTGA-CCCATTTATTGATAATAATATAGAGAGGAGTA 513 Query 305 AGTCTATCGGTCCTGAGCTCATAGAAGCTATCAGAGGATCAAAGATCGCGATCGTCTTGC 364 |||| ||||||| |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 514 AGTCGATCGGTCATGAGCTCAAAGAAGCTATCAAAGGATCAAAGATCGCGATCGTCTTGC 573 Query 365 TCTCGAGGAACTACGCTTCTTCGTCTTGGTGCCTAAACGAGTTGGTGGAGATCATGAAGT 424 |||| | |||||| |||||||| ||||||||||| | || || | || |||||||||| Sbjct 574 TCTCAAAGAACTATGCTTCTTCATCTTGGTGCCTTGATGAATTAGCAGAAATCATGAAGT 633 Query 425 GTAGAGAAGAACTGGGTCAAACAGTGATGACCATTTTCTATGATGTTGATCCAACAGACG 484 |||| ||| ||||||| | ||| ||||| ||||||||||| || |||||||| ||| Sbjct 634 GTAGGGAATTGTTGGGTCAGATAGTCATGACTATTTTCTATGAAGTGGATCCAACTGACA 693 Query 485 TAAAGAAGCAGACAGGAGATTTTGGGAAGGTCTTCA-AGAAAACGTGTAAAGGTAAAACC 543 ||||||| ||||| || || ||||| || | ||||| | ||||| |||||||||||||| Sbjct 694 TAAAGAAACAGACCGGTGAATTTGGAAAAGCCTTCACA-AAAACATGTAAAGGTAAAACA 752 Query 544 AAAGAGGACATTAAGAGATGGC-AAAACGTTTTGGAGTCTGTGGCAACAATCGCTGGGGA 602 |||||| | || |||||||| |||| | ||||||| |||||| |||||||| || || Sbjct 753 AAAGAGTATGTTGAGAGATGGAGAAAA-GCTTTGGAGGATGTGGCCACAATCGCCGGAGA 811 Query 603 GCATTCCCGTAACTGG 618 ||||| || |||||| Sbjct 812 ACATTCTCGCAACTGG 827 > AT2G14080.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr2:5925186-5929600 FORWARD LENGTH=3687 Length=3687 Score = 403 bits (218), Expect = 9e-112 Identities = 431/528 (82%), Gaps = 38/528 (7%) Strand=Plus/Plus Query 30 TGTTGCTGCCATAACTTTCTTCACGATTTTGGGTACAATATTTT-TCATGTTTTAT-AAA 87 |||||||| | | || |||||||| |||||||||||||||||| | ||| ||||| || Sbjct 66 TGTTGCTG-C-T-ACGTTCTTCACTCTTTTGGGTACAATATTTTAT-ATGATTTATGGAA 121 Query 88 AAAGTCAAATCCCATCAAGAAAACAAAACAATAGcttcttcttcttcttctttatctatt 147 || || | | | |||| |||| | |||| || |||||||||| | | ||| Sbjct 122 AATTTCGAGT--C--CAAG-AAAC--TATAATAACTACTTCTTCTTC-AC-CT-CCTA-- 169 Query 148 tcatctacttc-atcttcttTGTCTCGAAAACGGAAACACGATGTCTTCCCAAGCTTCCA 206 ||||| | | ||||||||||||| | || | |||||||||||||||||| |||||||| Sbjct 170 -CATCT-CCCCAATCTTCTTTGTCTTGTAACCAGAAACACGATGTCTTCCCCAGCTTCCA 227 Query 207 CGGGGCAGATGTTCGAAAAACATTTCT-TGCTCACATCCTAAAAGAG-TTCAAAGGAAAG 264 |||||||||||| || ||| ||||||| | |||||| | |||||| || |||| |||| Sbjct 228 CGGGGCAGATGTGCGCAAATCATTTCTCAG-TCACATTTTGAAAGAGTTTAAAAGAAAAG 286 Query 265 GGAATCAG-TCCATTCATTGATAATGATATCGAGAGGAGCAAGTCTATCGGTCCTGAGCT 323 || ||| | | | |||||||||||| |||| ||||||||||| || |||||||| || || Sbjct 287 GG-ATC-GATACGTTCATTGATAATAATATTGAGAGGAGCAAATCGATCGGTCCAGAACT 344 Query 324 CATAGAAGCTATCAGAGGATCAAAGATCGCGA-TCGTCTTGCTCTCG-AGGAACTACGCT 381 ||||||||| |||| |||||| ||||| || | | |||||||||||| ||| |||||||| Sbjct 345 CATAGAAGCAATCAAAGGATCTAAGATTGC-AGTTGTCTTGCTCTCGAAGG-ACTACGCT 402 Query 382 TCTTCGTCTTGGTGCCTAAACGAGTTGGTGGAGATCATGAAGTGTAGAGAAGAACTG--G 439 || ||||| |||||||| ||||||||||||||||||||||||||||| ||| || || | Sbjct 403 TCCTCGTCGTGGTGCCTGAACGAGTTGGTGGAGATCATGAAGTGTAG-GAA-AA-TGTTG 459 Query 440 G-TCAAACAGTGATGACCATTTTCTATGATGTTGATCCAACAGACGTAAAGAAGCAGACA 498 | ||||||||||||||| ||||||||||| || |||||||| || ||||||||||| || Sbjct 460 GATCAAACAGTGATGACAATTTTCTATGAAGTGGATCCAACTGATGTAAAGAAGCAAACC 519 Query 499 GGAGATTTTGGGAAGGTCTTCAAGAAAACGTGTAAAGGTAAAACCAAA 546 ||||| ||||||||||||||||||||||| |||| |||||||| ||| Sbjct 520 GGAGACTTTGGGAAGGTCTTCAAGAAAACTTGTATGGGTAAAAC-AAA 566 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31446576022 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5