BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891948 Length=174 Score E Sequences producing significant alignments: (Bits) Value AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | ... 71.3 3e-12 > AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | chr5:9785407-9789232 FORWARD LENGTH=3461 Length=3461 Score = 71.3 bits (38), Expect = 3e-12 Identities = 42/44 (95%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 1 ATGCTGAGATTGCTCAACAAACGGATTCGATTCAGGATCCTAAG 44 |||||| ||||| ||||||||||||||||||||||||||||||| Sbjct 142 ATGCTGTGATTGTTCAACAAACGGATTCGATTCAGGATCCTAAG 185 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 7595504001 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5