BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg891996 Length=477 Score E Sequences producing significant alignments: (Bits) Value AT2G43470.1 | Symbols: | Protein of unknown function (DUF3755)... 180 1e-44 > AT2G43470.1 | Symbols: | Protein of unknown function (DUF3755) | chr2:18049858-18051218 REVERSE LENGTH=719 Length=719 Score = 180 bits (97), Expect = 1e-44 Identities = 139/158 (88%), Gaps = 7/158 (4%) Strand=Plus/Plus Query 306 CACAGAAAACTTGGACCTTTTCAGCAAAATTCGGGAGAACATCAATAGCCTTCTCAAAAA 365 |||||| ||||| ||||||||||| ||||| |||||||||||||| |||||||||||| | Sbjct 453 CACAGACAACTTAGACCTTTTCAGAAAAATCCGGGAGAACATCAAAAGCCTTCTCAAAGA 512 Query 366 TTTGAATGAGAATGTGTCGGAGACATGGAAGCAA-ATGCCA-C--CATTGCCGGAGAAGT 421 ||||||||||||||||||||||||||||||| || |||||| | ||||||||||||||| Sbjct 513 TTTGAATGAGAATGTGTCGGAGACATGGAAG-AATATGCCATCATCATTGCCGGAGAAGT 571 Query 422 TGAACGATGAGCTCTTT-TGTGATCTCTATAAAGCAAT 458 |||||||||| || ||| | || || |||||||||| Sbjct 572 TGAACGATGAACTATTTCT-TGGCCTAGATAAAGCAAT 608 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22705834444 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5