BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg892007 Length=339 Score E Sequences producing significant alignments: (Bits) Value AT5G02000.1 | Symbols: | unknown protein; Has 5 Blast hits to ... 484 2e-136 > AT5G02000.1 | Symbols: | unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:380155-380595 REVERSE LENGTH=441 Length=441 Score = 484 bits (262), Expect = 2e-136 Identities = 307/328 (94%), Gaps = 5/328 (2%) Strand=Plus/Plus Query 1 ATGGAGAATGAGGTGCGATGGATGAATGAAGTGTCGTCCGATAGCAGCAACGATGGTGAA 60 |||||||| |||||| ||||||||||||||| |||| |||||||||||| |||||||| Sbjct 1 ATGGAGAACGAGGTGGGATGGATGAATGAAGCGTCGAAGGATAGCAGCAACAATGGTGAA 60 Query 61 TCTTTCATTGAAATAAAAATCAACAAACCAGTCACAGA-CACAGGATTGAGCATCTCTTC 119 ||||||||||||||| ||||||||||| |||||| | | ||||||||||||||||||||| Sbjct 61 TCTTTCATTGAAATACAAATCAACAAAGCAGTCAGA-ACCACAGGATTGAGCATCTCTTC 119 Query 120 TTCGCCATCTCCCGATAACGAAATGC--A-GACGACAGCAATCTTCTCATCGGCGTCTAG 176 ||||||||||||||| |||||||||| | |||||||||||||||||||||||| |||| Sbjct 120 TTCGCCATCTCCCGAGAACGAAATGCAGACGACGACAGCAATCTTCTCATCGGCCACTAG 179 Query 177 TTGCTTCTCTGCATACAGCAACGTGACGAGGTTGATGATGAAAGTGGGGTGTTTGAGTAT 236 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 180 TTGCTTCTCAGCATACAGCAGCGTGACGAGGTTGATGATGAAAGTGGGGTGTTTGAGTAT 239 Query 237 AGTGGGAGTCATAAGAGAGAAAGTGAACGTGGGAGAGAGGTGGGTCCTCCAAGTTATACA 296 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 240 AGTGGGAGTCATAAGAGAGAAAGTAAACGTGGGAGAGAGGTGGGTCCTCCAAGTTATACA 299 Query 297 GAGACGACGAAACAAGAGCCCCCTACGA 324 |||||||||||||||||||||||||||| Sbjct 300 GAGACGACGAAACAAGAGCCCCCTACGA 327 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15834340935 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5