BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg892101
Length=1551
Score E
Sequences producing significant alignments: (Bits) Value
AT5G01120.1 | Symbols: | Protein of unknown function (DUF674) ... 2218 0.0
AT5G43240.1 | Symbols: | Protein of unknown function (DUF674) ... 1247 0.0
> AT5G01120.1 | Symbols: | Protein of unknown function (DUF674)
| chr5:44813-47127 FORWARD LENGTH=1758
Length=1758
Score = 2218 bits (1201), Expect = 0.0
Identities = 1439/1552 (93%), Gaps = 23/1552 (1%)
Strand=Plus/Plus
Query 1 ATGTCAGATGATTTGGAGAATTCGGTGATTAACTTGAAGCTACTCATAGATGAAGAGAAA 60
|||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 85 ATGTCAGACGATTTCGAGAATTCGGTGATAAACTTGAAGCTGCTCATAGATGAAGAGAAA 144
Query 61 AACAAAGTTGTATTCGCTGAGGCTGGTCA-AGATTTCGTCGATATACTCTTTAGCTTTTC 119
||||||||||||||||||||||| ||| | |||||| |||||||||||||||||||||||
Sbjct 145 AACAAAGTTGTATTCGCTGAGGCGGGT-ACAGATTTTGTCGATATACTCTTTAGCTTTTC 203
Query 120 GACTTTGCCAATGGGAACAATTGTTAGATTGCTGGAGATGCATCACAAGTCAAAG-GCAA 178
||||||||| ||||||||||||||||||||||||||||||||||||||||| | | |||
Sbjct 204 GACTTTGCCTATGGGAACAATTGTTAGATTGCTGGAGATGCATCACAAGTC-ACGCTCAA 262
Query 179 TAGCCGTAGGTTGTTTCAATAACATCTATGGGAGTGTTGTTAGTATGGGAATGAAGCATT 238
||||| | ||||||||||| |||||||||| |||||||| |||||||||||||||||||
Sbjct 263 TAGCCATTGGTTGTTTCAACAACATCTATGCAAGTGTTGTGAGTATGGGAATGAAGCATT 322
Query 239 TCAGTACTGAAGCTTGCAAGCAAATGCTTTTGTATCCGGGGAGTTTGAATCAGGAGAAAT 298
|||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||
Sbjct 323 TCAGTACTCAAGCTTGCAAGCAAATGCTTTTGTTTCCTGGGAGTTTGAATCAGGACAAAT 382
Query 299 GTCAAAAGATTAAGCTGAAGATTGATGATTCCGAGGCTACTAAATGTTTCATGTGCCCTA 358
||||||| || ||||||||||| ||||||||||||||||| || ||||||||||| ||||
Sbjct 383 GTCAAAATATGAAGCTGAAGATAGATGATTCCGAGGCTACCAAGTGTTTCATGTGTCCTA 442
Query 359 TGTTTGTGCGAAGCGGACAATGTAGTAAAGGGTATAGCAATTTTAATACCTCGAGGTGTA 418
|||||||||||||||||||||| || ||||| |||||||||||||| ||||| |||||||
Sbjct 443 TGTTTGTGCGAAGCGGACAATGCAGCAAAGGCTATAGCAATTTTAAGACCTCTAGGTGTA 502
Query 419 GCTGTGGGAATTTGATGGATGCA-GTGATTCAGTTTCAAGGAGAAGGAGGCCGAGGAAGC 477
||||||||||||| ||||||| | ||||||||||||||||||||||| |||| | |
Sbjct 503 GCTGTGGGAATTTCATGGATG-AGGTGATTCAGTTTCAAGGAGAAGGTGGCC---G-A-- 555
Query 478 GTGGGAAAAGGTGT-TGAAGGTGGAGTATTTGTGAGGAATGGTCATACTTCATTCATAAT 536
||||| ||| | | ||| || ||||||||||||| || ||||||||||||||||||
Sbjct 556 ---GGAAATGGT-TCTCAAGCTGAAGTATTTGTGAGGGGTGCTCATACTTCATTCATAAT 611
Query 537 CACTGATGATTTGAAAGTGCAAGTTAACTCAGTTGGGTCAACACTTAAGGTTCTTAAAGA 596
|||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 612 CACTGATGATTTGAAAGTGCAAGTTAACTCTGTTGGGTCAACGCTTAATGTTCTTAAAGA 671
Query 597 TCTTGGCTATGCAGATTGCAATAAGTTGGTTGAAATGATTCTCGAGGTTAATCTCCAAGA 656
||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||||||||
Sbjct 672 TCTTGCCTATGCAGATTGCGATAAGTTGGTTGAAATGATTCTTGAGGTGAATCTCCAAGA 731
Query 657 GGTAGCGACTTTGCTGGTGTGTTTATTCACATCGGATACTCCATTGAGCGATACATTTCT 716
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 732 GGTAGCGACTTTGCTGGTGTGTTTGTTCACATCGGATACTCCATTGACCGATACATTTCT 791
Query 717 GAAAAAGAAAAGCTCATGTGGTATGAAGAAGATTCATAAATGGCCGAGTCCTTCTCTCAG 776
|||||||||||||||| ||||||||| | |||||||||| |||||||||||||||||||
Sbjct 792 GAAAAAGAAAAGCTCACATGGTATGAACAGGATTCATAAAAGGCCGAGTCCTTCTCTCAG 851
Query 777 TGAGGATAGAGAGGAAACAAAAGCTGATCAAACGATAACGCTGAATGCATATGTTAGGAA 836
||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||
Sbjct 852 TGAAGATAGAGAGGAAACAAAAGCTGATCAAACGATAATGCTCAATGCGTATGTTAGGAA 911
Query 837 GGAAGAAGGGAGCATTCTATATGTTGAATGTGGTGAAGACTTTGTTGATCTTCTTTTCTC 896
||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 912 GGAGGAAGGGAACATTCTATATGTTGAATGTGGTGACGACTTTGTTGATCTTCTTTTCTC 971
Query 897 TTTTCTTGCTATGCCTCTGGAATCTGTATGGGAAATCTCGGGCAGAGGAATCATCCTTGG 956
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 972 TTTCCTTGCTATGCCTCTGGAATCTGTATGGGACATCTCGGGCAGAGGAATCATCCTTGG 1031
Query 957 ATGCATTGGAAACTTGTGCAAAAGCTTCAAGGATTTGAGT-GTTGATTCCGGAAGAGAAG 1015
|||||||||||||||||||||||||||||||||||||||| | || ||||| || ||||
Sbjct 1032 ATGCATTGGAAACTTGTGCAAAAGCTTCAAGGATTTGAGTAG-TGCTTCCGCAACTGAAG 1090
Query 1016 CTTCAGCTTTTAAATGTGTTCTTCCTCATTACTACAAGTGTCAGAAGCAGCTGCTAAATG 1075
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1091 CTTCAGCTTTTAAATGTGTTCTTCCTCATTACTACAAGTGCCAGAAGCAGCTGCTAAATG 1150
Query 1076 AGGTTGTCACTACCCAGCAGCCACCAACTTATTACCGTTTTTTATCCTTCTCTGTGGATC 1135
| |||||||| ||||| |||||||||||||||||||||||| |||| ||||||| |||||
Sbjct 1151 ATGTTGTCACAACCCATCAGCCACCAACTTATTACCGTTTTGTATCGTTCTCTGCGGATC 1210
Query 1136 ATTTTAGAGAGTACTGTTTGTCTGAAAACTCTGGTAAGCGACTTGTGTATGACTGGGATA 1195
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1211 ATTTTCGAGAGTACCGTTTGTCTGAAAACTCTGGTAAGCGACTTGTGTATGACTGGGATA 1270
Query 1196 AACTCGTGCCTGTGACTTCGATAGACCCaaaaaaaCCCGAAGGCAACGACACTGCTGAAT 1255
||||||||||||||||||||||||| || |||| || ||||||||| |||||||||||
Sbjct 1271 AACTCGTGCCTGTGACTTCGATAGATCCGAAAA--CC-GAAGGCAACAACACTGCTGAAA 1327
Query 1256 CAAGTGGATTTGTGAAGAGAGGGACAAAGTTCATGGTGACAGATGATCTGATCATCACTC 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1328 CAAGTGGATTTGTGAAGAGAGGGACAAAGTTCATGGTGACAGATGATCTGATCATTAATC 1387
Query 1316 CTTCGAACTCAACCTCAACCATTGGATTCTTAAAGGAGAAACAGACCCGACTAGATGAAG 1375
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1388 CTTCGAACTCAACCTCAACCATTGGATTCTTAAAGGAGAAACAGACTCGACTAGATGAAG 1447
Query 1376 TGGAAATACGAGTGATCAATATGACAAAAGAAGAGGCCATCATATTATTGGGAGCTTCAA 1435
| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1448 TTGAAATTCGAGTGATCAATATGACAAAAGAAGAGGCCATCAGATTATTGGGAGCTTCAA 1507
Query 1436 TGGTGACATCCTCTGCCTTAAGCACTGGTCTGCTAGCTATAGAATCAGCTTCAACAAGTG 1495
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1508 TGGTGACATCCTCTGCCTTAAGCACTGGTCTGCTAGCTATGGAATCAGCTTCAACAAGTG 1567
Query 1496 ATCCTCAATGCCGGTTCTTTAAGAAGCCGAAGATTGAGTCTGAGACT-GAGA 1546
||||| |||||||||| ||||||||||||||||||||| | |||||| ||||
Sbjct 1568 ATCCTAAATGCCGGTTTTTTAAGAAGCCGAAGATTGAGACAGAGACTTGAGA 1619
> AT5G43240.1 | Symbols: | Protein of unknown function (DUF674)
| chr5:17352986-17355122 REVERSE LENGTH=1671
Length=1671
Score = 1247 bits (675), Expect = 0.0
Identities = 1293/1581 (82%), Gaps = 83/1581 (5%)
Strand=Plus/Plus
Query 1 ATGTCAGATGA-TTTGGAGAATTCGGTGATTAACTTGAAGCTACTCATAGATGAAGAGAA 59
||||||| | | |||| ||||| |||||||||| ||||| ||||||||||||||||||||
Sbjct 42 ATGTCAGCT-ACTTTGAAGAATCCGGTGATTAAGTTGAAACTACTCATAGATGAAGAGAA 100
Query 60 AAACAAAGTTGTATTCGCTGAGGCTGGTCAAGATTTCGTCGATATACTCTTTAGCTTTTC 119
||||||||||||||| | |||||| ||| ||||||| |||||| |||||||||| ||||
Sbjct 101 AAACAAAGTTGTATTTGTTGAGGCGGGTAAAGATTTTGTCGATTTACTCTTTAGTTTTTT 160
Query 120 GACTTTGCCAATGGGAACAATTGTTAGATTGCTGGAGATGCATCACAAGTCAAAGGCAAT 179
||||||||||||||||| ||||||||||||||||||||| || | |||||| || |||
Sbjct 161 TACTTTGCCAATGGGAACGATTGTTAGATTGCTGGAGATGTATAAGAAGTCACAGAAAAT 220
Query 180 AGCCGTAGGTTGTTTCAATAACATCTATGGGAGTGTTGTTAGTATGGGAAT-GAAGCATT 238
||| |||| ||||||| || || |||| |||||||| |||||||| || || |||||
Sbjct 221 AGCAATAGGCTGTTTCAGCAATATATATGCAAGTGTTGTGAGTATGGGCATTGA-GCATT 279
Query 239 TCA-GTACTGAAGCTTGCAAGCAAATGCTTTTGTATCCGGGGAGTTTGAATCAGGAGAAA 297
|| | ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 280 TCTTG-ACTGAAGCTTGTAAGCAAATGCTTTTGTATCCGGGCAGTTTGAATCATGAGAAA 338
Query 298 TGTCAAAAGATTAAGCTGAAGATTGATGATTCCGAGGCTACTAAATGTTTCATGTGCCCT 357
|||| ||| ||||||||| | | ||||||||||||||||| || | |||| |||| |||
Sbjct 339 TGTCGAAACCTTAAGCTGAGGGTAGATGATTCCGAGGCTACCAAGTATTTCGTGTGTCCT 398
Query 358 ATGTTTGTGCGAAGCG-GA-CAATGTAGT-AAAGGGTATAGCAATTTTAATACCTCGAGG 414
| ||||||| ||| || || ||||||| | |||| || ||||||||||||||||||||
Sbjct 399 AAGTTTGTG-GAA-CGTGAGCAATGTACTGAAAGT-TACAGCAATTTTAATACCTCGAGA 455
Query 415 TGTAGCTGTGG-GAATTTGATGGATGCAGTGATTCAGTTTCAAGGA-GAAGGAGGCCGAG 472
||||||||||| | ||||||| ||| ||||| |||| || | ||| || ||||||| ||
Sbjct 456 TGTAGCTGTGGTGT-TTTGATGAATGAAGTGACTCAGCTTGATGGAAGA-GGAGGCCTAG 513
Query 473 GAAGCGTGGGAAAAGGTGTTGAAGGTGGAGTATTTGTGAGGAATGGTCATACTTCATTCA 532
|| | ||||| ||||||||||||||||||||||| |||| || ||||||||||||||
Sbjct 514 CCAGTGCAGGAAATGGTGTTGAAGGTGGAGTATTTGTTAGGAGTGATCATACTTCATTCA 573
Query 533 TAATCACTGATGATTTGAAAGTGCAAGTTAACTCAGTTGGGTCAACACTTAAGGTTCTTA 592
| ||||||||||||||||||||| || ||| ||| ||| ||| |||||||| |||||||
Sbjct 574 TGATCACTGATGATTTGAAAGTGGAAATTACCTCTGTTAGGTTGACACTTAATGTTCTTA 633
Query 593 AAGATCTTGGCTATGCAGATTGC-AATAAGTTGGTTGA-AATGATTC-TCGAGGTTAATC 649
||||||||||||| | |||||| || ||||||| ||| || ||||| | || |||||||
Sbjct 634 AAGATCTTGGCTACGTAGATTGTGAA-AAGTTGGATGAGAA-GATTCAT-GACGTTAATC 690
Query 650 TCCAAGAGGTAGCGACTTTGCTGGTGTGTTTAT-TCACATCGGATACTCCATTGAGCGAT 708
|| |||||||| |||||||||||| |||||| | | |||||||||| |||||||| ||||
Sbjct 691 TCGAAGAGGTACCGACTTTGCTGGAGTGTTTGTCT-ACATCGGATAATCCATTGACCGAT 749
Query 709 ACATTTCTGAAAAAGAAAAGCTCATGTGGTATGAAGAAGATTCATAAATGGCCGAGTCCT 768
|||||||||||||||||||| |||| | ||| |||| |||||| |||| ||||||||||
Sbjct 750 ACATTTCTGAAAAAGAAAAGTTCATATAGTACAAAGAGGATTCAGAAATTGCCGAGTCCT 809
Query 769 T-CTCTCAGTGAGGATAGAGAGGAAACAAAAGCTGATCAAACGATAACGCTGAATGCATA 827
| ||| |||| |||||||||||| ||| | |||| |||||||| || || |||| |
Sbjct 810 GGC-CTCTGTGAAGATAGAGAGGAATCAACACCTGACCAAACGATTACACTAAATG--T- 865
Query 828 TGTTAGGAAGGAAG-AAGGGAGCATTCTATATGTTGAATGTGGTGAAGACTTTGTTGATC 886
||| | |||||||| || | |||||| | ||||||||||||||| |||||||||||||
Sbjct 866 TGTAAAGAAGGAAGGAA---A-CATTCTGTTTGTTGAATGTGGTGATGACTTTGTTGATC 921
Query 887 TTCTTTTCTCTTTTCTTGCTATGCCTCTGGAATCTGTATGGGAAATCTCGGGCAGA-GGA 945
|||| ||| ||||||||||||| ||||| ||||||| ||||| ||| | ||| || |||
Sbjct 922 TTCTCTTCACTTTTCTTGCTATACCTCTAGAATCTGCATGGGGAATAGCTGGC-GATGGA 980
Query 946 ATCATCCTTGGATGCATTGGAAACTTGTGCAAAAGCTTCAAGGATTTGAGTGTTGATTCC 1005
|||||| |||||||||||||||||||| |||||||||| ||||| || ||||||||| ||
Sbjct 981 ATCATCATTGGATGCATTGGAAACTTGAGCAAAAGCTTTAAGGACTTAAGTGTTGATCCC 1040
Query 1006 GGAAGAGAAGCTTCAGCTTTTAAATGTGTTCTTCCTCATTACTACAAGTGTCAGAAGCAG 1065
||| |||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct 1041 GGACGAGAAGCT--A------AA-TGTGTTCTTCCTCATTACTACAAGTGTCAGAAGCAG 1091
Query 1066 CTGCTAAATGAGGTTGTCACTACCCAGCAGCCACCAACTTAT-TACC-GTTTTTTATCCT 1123
|| || ||| | |||||| ||||| ||||||| |||| | ||| || | | ||||
Sbjct 1092 CTACT---TGATGCTGTCACCACCCATAAGCCACCGACTT-TCTACTTGTATGTG-TCCT 1146
Query 1124 TC-T--CTGTGGA-TCATTTTAGAGAGTACTGTTTGTCTGAAAACTCTGGTAAGCGACTT 1179
| | || | || |||| ||||||||||| ||||||| ||| |||| |||||| ||||
Sbjct 1147 CCATGGCT-TCGAATCATATTAGAGAGTACCGTTTGTCAGAAGACTCCAGTAAGCCACTT 1205
Query 1180 GTGTATGACTGGGATAAACTCGTGCCTGTGACTTCGATAGACCCaaaa---aaaCCCGAA 1236
|| ||| |||||| ||||| |||| ||| ||||||||| |||||| ||| | |
Sbjct 1206 GTTTATTTTTGGGATGAACTCATGCCCATGATTTCGATAGATCCAAAATCTAAAG--GTA 1263
Query 1237 GG-C-AACGAC-ACTGCTGAATCAA---------GTGGA---TTTGTGAAGAGAGGGACA 1281
| | ||| || |||| ||| |||| |||| ||| ||||||||||||||
Sbjct 1264 GTACTAAC-ACTACTGATGAGTCAACAATACCCAGTGGTGGCTTTATGAAGAGAGGGACA 1322
Query 1282 AAGTTCATGGTGACAGATGATCTGATCATCACTCCTTCGAACTCAACCTCAACCATTGGA 1341
||||| ||| | ||||||||| |||||||||| |||| ||| ||||||||||||||||||
Sbjct 1323 AAGTTTATGATAACAGATGATTTGATCATCACACCTTTGAATTCAACCTCAACCATTGGA 1382
Query 1342 TTCTTAAAGGAGAAACAGACCCGACTAGATGAAGTGGAAATACGAGTGATCAAT-ATGAC 1400
|| |||| || ||||||| |||| ||||||| || || | | || ||||| | || |
Sbjct 1383 TTGGTAAAAGAAAAACAGATCCGATTAGATGATGTCGAGGTTCAAGAGATCA-TCATTAG 1441
Query 1401 AAAAGAAGAGGCCATCATATTATTGGGAGCTTCAATGGTGACATCCTCTGCCTTAAGCAC 1460
||||||||||||||| | ||||| ||||||| ||||||||| ||||||||||||||
Sbjct 1442 AAAAGAAGAGGCCATTAGGTTATTACAAGCTTCATTGGTGACATGTTCTGCCTTAAGCAC 1501
Query 1461 TGGTCTGCTAGCTATAGAATCAGCTTCAACAAGTGATCCTCAATGCCGGTTCTTT-AAGA 1519
|||||| |||||||||||||||||||||||||||| ||||||| || | ||| ||||
Sbjct 1502 TGGTCTTCTAGCTATAGAATCAGCTTCAACAAGTGTTCCTCAAAGC-GCAAATTTGAAGA 1560
Query 1520 AGCCGAAGATTGAGTCT-GAG 1539
|||| ||||||||| || |||
Sbjct 1561 AGCCAAAGATTGAGACTTGAG 1581
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76555831125
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5