BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg892382
Length=1980
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04700.1 | Symbols: | Ankyrin repeat family protein | chr5:... 1245 0.0
AT5G04690.1 | Symbols: | Ankyrin repeat family protein | chr5:... 846 0.0
AT5G04680.1 | Symbols: | Ankyrin repeat family protein | chr5:... 743 0.0
> AT5G04700.1 | Symbols: | Ankyrin repeat family protein | chr5:1354240-1356754
REVERSE LENGTH=2010
Length=2010
Score = 1245 bits (674), Expect = 0.0
Identities = 1074/1263 (85%), Gaps = 43/1263 (3%)
Strand=Plus/Plus
Query 739 CTT-GCCGTCACAAAACACTTGCAGATAGAGTCGACT-CCCATCATCGTTTTAGCTTCAA 796
||| |||||||||||||||| ||| || ||||||| | |||||||| || || |||||||
Sbjct 741 CTTAGCCGTCACAAAACACTCGCAAATCGAGTCGA-TACCCATCATTGTCTTGGCTTCAA 799
Query 797 AACCGGACCTTTTTCCCAGCGGCTGCCGTCTCGGACCATTGGA-ACGCATT-ATATACGA 854
| || || |||||||| | |||||| ||| |||||||| || ||| || || |||
Sbjct 800 AGCCAGATCTTTTTCCTGGTGGCTGCTATCTTGGACCATT-GACACG-TTTCATCTACTC 857
Query 855 TTGTATACAAGTAAAGCT-TCAGGCTAAT-C-CAG-GTTGGTTTTATCCGAAA-AAAGAT 909
||| |||||||||||||| || || | | ||| || | | | | ||| | ||||
Sbjct 858 TTGGATACAAGTAAAGCTGCCA-ACTCTTCCACAGCCTT-CTCGT-T-C-AAACAGAGAT 912
Query 910 CAGCA-AACTACCCTGATGAGGAAGCTGCT-TAAGTGTCTCTCCAAATGGACTGGAATAG 967
||||| || ||| ||||||||||| ||||| ||| | ||||||||||||||||||||||
Sbjct 913 CAGCAGAA-TACTCTGATGAGGAAACTGCTCAAAG-GCCTCTCCAAATGGACTGGAATAG 970
Query 968 ATGAAGTGTACCAACTGAAGGTTATGCATCTACAAGCCAAGAAGCTTTTATTGGTAATAT 1027
|||||||||||| ||| ||||| |||||||||||||||||||||||| || ||| |||||
Sbjct 971 ATGAAGTGTACCGACTTAAGGTCATGCATCTACAAGCCAAGAAGCTTCTACTGGGAATAT 1030
Query 1028 CAGAAGAAACACGGGCCATGGGATTAAAGGAACGTTCCGAGACAGTGGGTGAGGCCTTAC 1087
||||||||||| |||| |||| || |||||||||||||||||||||| |||||| ||||
Sbjct 1031 CAGAAGAAACATTGGCCTTGGGCTTGAAGGAACGTTCCGAGACAGTGGATGAGGCTTTAC 1090
Query 1088 TCTTTGCAGTAAGGTATGGGAATGTGGATTTCTTGGTGGAGATGATCAAGAA-CAACTCC 1146
|||||||||| || |||||||||||||||||||||||||| ||||||| ||| |||||||
Sbjct 1091 TCTTTGCAGTGAGATATGGGAATGTGGATTTCTTGGTGGAAATGATCA-GAAACAACTCC 1149
Query 1147 GAGCTTCTATGGTCCACGAAAACGAGCTTGAGTAGAACTCTGTTTCTCTTGGCCGTCGAG 1206
||||||||||||||||||| ||| |||| ||| || ||||||||||||||||||||||||
Sbjct 1150 GAGCTTCTATGGTCCACGAGAACAAGCTCGAGCAGTACTCTGTTTCTCTTGGCCGTCGAG 1209
Query 1207 TTGAGACAAGAAAAAGTGTTTAGTCTACTCTACGGTCTGGACGATAGGAAGTACTTGTTG 1266
|| |||||||| || ||||||||||| || |||||||||||||| || ||||||||||||
Sbjct 1210 TTCAGACAAGAGAAGGTGTTTAGTCTCCTATACGGTCTGGACGACAGAAAGTACTTGTTG 1269
Query 1267 CTTGTGGA-AAGGGACTGTGATGGCAATGGTATGCTTCATCTCGCCGGCTATCTTTCTCC 1325
|| | || |||| |||||||||| |||||| ||||||||||||| |||| || |||||
Sbjct 1270 CTCGCAGACAAGG-ACTGTGATGGAAATGGTGTGCTTCATCTCGCTGGCTTTCCGTCTCC 1328
Query 1326 TCCTTGCAAGCTCTCTACCGTTACTGGCGCAGCTTTGAAGATGCAACGTGAGTTACAATG 1385
||||| ||||||||||| || ||||||| ||||| || ||||||| |||||||||||
Sbjct 1329 TCCTTCCAAGCTCTCTAGTGTCGTTGGCGCACCTTTGCAGTTGCAACGCGAGTTACAATG 1388
Query 1386 GTTCAAGGAAGTGGAGAAAATTGTACCAGAGATCGAGAAGCAGAGAGTAAACACAAGTGG 1445
||||||||||||||||| ||| | ||| |||||||||||| |||||||||||||| | |
Sbjct 1389 GTTCAAGGAAGTGGAGAGAATCGCACCGGAGATCGAGAAGGAGAGAGTAAACACA-GAAG 1447
Query 1446 A-CAAACACCAATCGAGATATTCACAAAGGAGCACCAAACATTGCGGCAAGAAGCTGAGA 1504
| |||||||| ||||||||||||||||||||||||||| | |||| |||||||| ||||
Sbjct 1448 AGCAAACACCGATCGAGATATTCACAAAGGAGCACCAAGGACTGCGACAAGAAGCAGAGA 1507
Query 1505 AATGTATGAAATACACGGCGATGTCGTGCAGCTTAGTCGCGACTCTCATATTCACGGTCA 1564
|||| |||||| ||||||| ||||| ||||||||||||||| | ||||| |||||||||
Sbjct 1508 AATGGATGAAAGACACGGCTATGTCATGCAGCTTAGTCGCGGCACTCATCGTCACGGTCA 1567
Query 1565 CCTTCGCGGCCGTCTTCACCGTCCC------CA-A--CTACAACTCACACGGCAAACCCT 1615
|||| ||||| |||||||| ||||| || | | |||| ||| | || |||||||
Sbjct 1568 CCTTTGCGGCGGTCTTCACTGTCCCTGGTGGCACAGACGACAATTCAAAAGGTAAACCCT 1627
Query 1616 TTCACCTACGTGATCGTGCT-TTCACCACATTCGTCGTCTCCGATCTGATCTCCTGCTTC 1674
|||||||||||||||| || |||| || |||| ||||||| ||| ||||||||||||||
Sbjct 1628 TTCACCTACGTGATCG-GCGATTCATCATATTCATCGTCTCAGATTTGATCTCCTGCTTC 1686
Query 1675 GCAGCTTGCACCTCCGTCCTCATTTTCCTCGGGATAC-ACACCGCAAGGTACTCCTTCGA 1733
|| ||||||||||||||||||| ||||||||||||| | |||||||| |||||||||||
Sbjct 1687 GCCTCTTGCACCTCCGTCCTCATCTTCCTCGGGATACTA-ACCGCAAGATACTCCTTCGA 1745
Query 1734 TGATTTCTTGTTCTCGCTACCGGCAAAGATGATCGCCGGACTCTCCATACTGTTCGTTTC 1793
||||||||| ||| || ||| |||||||||| |||||||| || ||||||||||||||
Sbjct 1746 CGATTTCTTGGTCTTTCTGCCGACAAAGATGATTGCCGGACTTTCGATACTGTTCGTTTC 1805
Query 1794 AATCGGGGCAATGCTTATTGCCTTCTCGTCGGCCCTATTCACGATGATGGATAAAGA-G- 1851
||| | ||| |||||||| || ||||||||||| |||||||||||||||| |||||| |
Sbjct 1806 AATAGCGGCGATGCTTATAGCATTCTCGTCGGCGCTATTCACGATGATGGGTAAAGAAGG 1865
Query 1852 -AAATGGATCGTTGCTCCGACGATCCTTCTCGCTTGTTTACCGGCGCTGCTGTTTGTTCT 1910
|||||||| |||||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct 1866 GAAATGGATTGTTGCTCCGACGATCCTTTTTGCTTGTTTACCGGCGCTGTTGTTTGTTCT 1925
Query 1911 GCTTCAGTATCCTCTCCTCAAAGAAATGATCTTTTCGACTTACGGTAAAGGAATCTTCGA 1970
||||||||||||||||||||| ||||||||||| || ||||| || ||||| ||||| ||
Sbjct 1926 GCTTCAGTATCCTCTCCTCAAGGAAATGATCTTCTCCACTTATGGAAAAGGGATCTTTGA 1985
Query 1971 CAG 1973
|||
Sbjct 1986 CAG 1988
Score = 366 bits (198), Expect = 4e-100
Identities = 396/492 (80%), Gaps = 12/492 (2%)
Strand=Plus/Plus
Query 175 GTATACTATGATTATATGCAATTAAGTAAAGGAATAAGCCAAGGGAGTGTAGAAGTTGTG 234
||||| ||||| ||||| ||||||||| |||||||||||||||| |||||||| | |||
Sbjct 229 GTATATTATGAGTATATACAATTAAGTCAAGGAATAAGCCAAGGTCGTGTAGAAATCGTG 288
Query 235 AAAGA-TGTCTTGAACCGTCGGCCGGGCGCTGTGGACGAATGGATAAACCCTTATGAGAC 293
|| || | ||||||| | || |||| | | ||||||||||||||||||| ||| |||||
Sbjct 289 AAGGACT-TCTTGAATCATCATCCGGACTCAGTGGACGAATGGATAAACCTTTACGAGAC 347
Query 294 ACCATTGTTGAAGGCTTGCGCATGTGGAAAACCCGAGATTGTTAAAGAGCTTCTTCGTCG 353
|||||||| |||||||| || ||||| |||||||||||||||||||||||||| |||||
Sbjct 348 GCCATTGTTAAAGGCTTGTGCGTGTGGGAAACCCGAGATTGTTAAAGAGCTTCTACGTCG 407
Query 354 CATGAAACCTGAACAAATGCTTCCCAAGATGAGCCGTCACACTTCATACCACACACCTCT 413
|||| ||||||||||||||||||||||||||||| || ||||||||||||| |||||
Sbjct 408 TATGACACCTGAACAAATGCTTCCCAAGATGAGCCAAAACGCTTCATACCACACGCCTCT 467
Query 414 CACTGTTGTCGCAGTCACCGGAAACATGGAGATCGCCAAATACTT-GCTTGACAAGAACT 472
||||||||| || || | |||||||||||||| || || ||| | | | |||||||
Sbjct 468 CACTGTTGTTGCGGTTAGTGGAAACATGGAGATTGCTGAAGCCTTAG-TCGCCAAGAACC 526
Query 473 TTGGGCTGCTAAAGATGCCAG-ACATAAATGGACAGCTTCCGGCCGTGGTTGCAATTGAG 531
| ||||||| |||| || | | || |||||||| |||||| |||||||| |||||
Sbjct 527 CTAAGCTGCTAGAGATTCCTGGA-ATCAATGGACAAATTCCGGTTGTGGTTGCGGTTGAG 585
Query 532 AACGGGCATAAAGAGATGGCTTGGTA-CTTTTACGTGCA-AACTATGCGTCCTC-TGTTA 588
|| || | ||||||||| | || |||| || || |||| | || | |||||
Sbjct 586 AATACACAGATGGAGATGGCTCGCTATCTTT-ACAC-CAGAACTCCG-GTTCAAGTGTTA 642
Query 589 CTTGATCAAGATGGGTACCACGGTACCTTGCTCATTATCAACGCCATCTACTACAAAATG 648
||||| ||||||||||| |||||| | |||||| || |||| ||||||| ||| ||||||
Sbjct 643 CTTGACCAAGATGGGTATCACGGTTCTTTGCTCTTTCTCAATGCCATCTTCTATAAAATG 702
Query 649 ATTGACATTGCG 660
||||||| |||
Sbjct 703 CTTGACATCGCG 714
> AT5G04690.1 | Symbols: | Ankyrin repeat family protein | chr5:1349643-1352525
REVERSE LENGTH=2016
Length=2016
Score = 846 bits (458), Expect = 0.0
Identities = 875/1073 (82%), Gaps = 41/1073 (4%)
Strand=Plus/Plus
Query 918 TACCCTGATGAGG-AAGCTGCTTAAGTGTCTCTCCAAATGGACT-GGAATAGATGAAGTG 975
|||||||||| || ||| |||| || |||||||||||||| | | || ||||||||||||
Sbjct 804 TACCCTGATGGGGAAAG-TGCTCAAATGTCTCTCCAAATGTA-TCGGGATAGATGAAGTG 861
Query 976 TACCAACTGAAGGTTATGCATCTACAAGCCAAGAAGCTTTTATTGGTAATATCAGAAGAA 1035
|||| ||| ||||| |||||||||||||||||||| ||| || || |||||||||||||
Sbjct 862 TACCGACTTAAGGTCATGCATCTACAAGCCAAGAAACTTCTAAAGGGAATATCAGAAGAA 921
Query 1036 ACACGGGCCATGGGATTAAAGGAACGTTCCGAGACAGTGGGTGAGGCCTTACTCTTTGCA 1095
||| |||| |||| || ||||||||||| ||| |||| | |||||| |||||||| |||
Sbjct 922 ACATTGGCCTTGGGCTTGAAGGAACGTTCTGAGTCAGTAGATGAGGCTTTACTCTTCGCA 981
Query 1096 GTAAGGTATGGGAATGTGGATTTCTTGGTGGAGATGATCAAGAACAACTCCGAGCTTCTA 1155
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 982 GTAAGATATGGGAATGTGGATTTCTTGGTGGAGATGATCAAGAACAACTCCGAGCTTCTA 1041
Query 1156 TGGTCCACGAAAACGAGCTTGAGTAGAACTCTGTTT--CTCTTGGCCGTCGAGTTGAGAC 1213
||||||||| ||| | |||| |||||||| | || | ||||| || | ||||
Sbjct 1042 TGGTCCACGGGAAC----T--AGTA---CTCTGTTTAACACT-G-CCGTCCAGGTCAGAC 1090
Query 1214 AAGAAAAAGTGTTTAGTCTACTCTACGGTCTGGACGATAGGAAGTACTTGTTGCTTGTGG 1273
|||| || ||||||||||| ||||||||||||| ||| |||||||||||||| || | |
Sbjct 1091 AAGAGAAGGTGTTTAGTCTCCTCTACGGTCTGGGCGACAGGAAGTACTTGTTTCTCGCCG 1150
Query 1274 A-AAGGGACTGTGATGGCAATGGTATGCTTCATCTCGCCGGCTATCTTTCTCCTCCTTGC 1332
| |||| || |||| || ||| || |||||||||| || ||||||| | ||||| || |
Sbjct 1151 ACAAGG-ACAGTGACGGAAATAGTGTGCTTCATCTTGCTGGCTATCCTCCTCCTAATTAC 1209
Query 1333 AAGCTCTCTACCGTTACTGGCGCAGCTTTGAAGATGCAACGTGAGTTACAATGGTTCAAG 1392
|||||| |||| || | ||||| | ||| |||||||||| |||||||||||||| |||
Sbjct 1210 AAGCTCGCTACGGTCGTTAGCGCAACGTTGCAGATGCAACGCGAGTTACAATGGTTTAAG 1269
Query 1393 GA-AGTGGAGAAAATTGTACCAGAGATCGAGAA-GCAGAGAGTAAACACAAGTGGA-CAA 1449
|| | |||||| ||| || || | |||||| || | |||||||||||||| | | |
Sbjct 1270 GAGA-TGGAGAGAATCGTGCCGGCGATCGAAAATG-AGAGAGTAAACACA-GAAAATCTG 1326
Query 1450 ACACCAATCGAGATATTCACAAAGGAGCACCAAACATTGCGGCAAGAAGCTGAGAAATGT 1509
||||| ||||||||||||| |||||||||| || || |||| | |||||| ||||| ||
Sbjct 1327 ACACCGATCGAGATATTCAGAAAGGAGCACGAAGCAATGCGACTAGAAGCCGAGAAGTGG 1386
Query 1510 ATGAAATACACGGCGATGTCGTGCAGCTTAGTCGCGACTCTCATATTCACGGTCACCTTC 1569
|||||| | || |||||||| ||||||||||| ||| ||||||| ||||||||||||||
Sbjct 1387 ATGAAAGATACTGCGATGTCTTGCAGCTTAGTAGCGGCTCTCATCGTCACGGTCACCTTC 1446
Query 1570 GCGGCCGTCTTCACCGTCCCC------A---ACTACAACTCACACGGCAAACCCTTTCAC 1620
||||| |||||||||||||| | || |||||||| ||| | ||||||||||
Sbjct 1447 GCGGCAATCTTCACCGTCCCCGGCGGCACGGACGACAACTCAGGCGGTAGACCCTTTCAC 1506
Query 1621 CTACGTGATCGTGCT-TTCACCACATTCGTCGTCTCCGATCTGATCTCCTGCTTCGCAGC 1679
| || ||| || | ||| || |||| |||||||||||||||||||||||||||| ||
Sbjct 1507 CGACATGAACGAA-TATTCGTCATATTCATCGTCTCCGATCTGATCTCCTGCTTCGCCGC 1565
Query 1680 TTGCACCTCCGTCCTCATTTTCCTCGGGATACACACCGCAAGGTACTCCTTCGATGATTT 1739
||||| ||||||||||| ||||||||||||| |||||| || ||| | ||||| |||||
Sbjct 1566 CTGCACTTCCGTCCTCATATTCCTCGGGATACTCACCGCGAGATACGCTTTCGACGATTT 1625
Query 1740 CTTGTTCTCGCTACCGGCAAAGATGATCGCCGGACTCTCCATACTGTTCGTTTCAATCGG 1799
|||||||||||| || || || |||||||| ||||| || | | |||| || || || |
Sbjct 1626 CTTGTTCTCGCTGCCTGCGAATATGATCGCTGGACTTTCGACATTGTTTGTCTCGATAGC 1685
Query 1800 GGCAATGCTTATTGCCTTCTCGTCGGCCCTATTCACGATGATGGATAAAGAGAAATGGAT 1859
||| |||||| | || |||||||||||| |||||||||| | ||| || |||||
Sbjct 1686 GGCGATGCTTGTGGCATTCTCGTCGGCCTTATTCACGATCTT---TAACGACCCTTGGAT 1742
Query 1860 CGTTGCTCCGACGATCCTTCT-CGCTTGTTTACCGGCGCTGCTGTTTGTTCTGCTTCAGT 1918
|||||||||||||||| |||| ||||||||| ||||||||| | |||||| || ||||||
Sbjct 1743 CGTTGCTCCGACGATC-TTCTTCGCTTGTTTCCCGGCGCTGTTATTTGTTATGATTCAGT 1801
Query 1919 ATCCTCTCCTCAAAGAAATGATCTTTTCGACTTACGGTAAAGGAATCTTCGAC 1971
|||||||||| || || ||||||| || |||||||| ||| |||||||||||
Sbjct 1802 ATCCTCTCCTTAAGGAGCTGATCTTCTCCACTTACGGCAAACGAATCTTCGAC 1854
> AT5G04680.1 | Symbols: | Ankyrin repeat family protein | chr5:1346238-1348857
REVERSE LENGTH=2165
Length=2165
Score = 743 bits (402), Expect = 0.0
Identities = 576/661 (87%), Gaps = 8/661 (1%)
Strand=Plus/Plus
Query 918 TACCCTGATGAGGAAGCTGCT-TAAGTGTCTCTCCAAATGGACTGGAATAGATGAAGTGT 976
||| ||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||
Sbjct 976 TACTCTGATGAGGAAACTGCTCAAAG-GTCTCTCCAAATGGACCGGAATAGATGAAGTGT 1034
Query 977 ACCAACTGAAGGTTATGCATCTACAAGCCAAGAAGCTTTTATTGGTAATATCAGAAGAAA 1036
||| ||| ||||| |||||||||||||||||||||||| || ||| ||||||||||||||
Sbjct 1035 ACCGACTTAAGGTCATGCATCTACAAGCCAAGAAGCTTCTACTGGGAATATCAGAAGAAA 1094
Query 1037 CACGGGCCATGGGATTAAAGGAACGTTCCGAGACAGTGGGTGAGGCCTTACTCTTTGCAG 1096
|| | || |||| || |||||||||||||||||||||| ||| || |||||||||||||
Sbjct 1095 CATTGACCTTGGGCTTGAAGGAACGTTCCGAGACAGTGGATGAAGCTTTACTCTTTGCAG 1154
Query 1097 TAAGGTATGGGAATGTGGATTTCTTGGTGGAGATGATCAAG-AACAACTCCGAGCTTCTA 1155
| || |||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct 1155 TGAGATATGGGAATGTGGATTTCTTGGTGGAAATGATC-AGAAACAACTCCGAGCTTCTA 1213
Query 1156 TGGTCCACGAAAACGAGCTTGAGTAGAACTCTGTTTCTCTTGGCCGTCGAGTTGAGACAA 1215
|||||||||| ||| |||| ||| || |||||||||||||||||||||||||| ||||||
Sbjct 1214 TGGTCCACGAGAACAAGCTCGAGCAGTACTCTGTTTCTCTTGGCCGTCGAGTTCAGACAA 1273
Query 1216 GAAAAAGTGTTTAGTCTACTCTACGGTCTGGACGATAGGAAGTACTTGTTGCTTGTGGA- 1274
|| || ||||||| ||| ||||||||||||||||| ||||||||||||||||| | ||
Sbjct 1274 GAGAAGGTGTTTAATCTCCTCTACGGTCTGGACGACAGGAAGTACTTGTTGCTCGCAGAC 1333
Query 1275 AAGGGACTGTGATGGCAATGGTATGCTTCATCTCGCCGGCTATCTTTCTCCTCCTTGCAA 1334
|||| || | || ||||||||| |||||||||||||||| | || ||||||||||| |||
Sbjct 1334 AAGG-ACAGCGACGGCAATGGTGTGCTTCATCTCGCCGGATTTCCTTCTCCTCCTTCCAA 1392
Query 1335 GCTCTCTACCGTTACTGGCGCAGCTTTGAAGATGCAACGTGAGTTACAATGGTTCAAGGA 1394
|||| ||| || | | ||||| ||||| ||||||||| ||||||||||||||||||||
Sbjct 1393 GCTCGCTAGTGTCATTTGCGCACCTTTGCGGATGCAACGCGAGTTACAATGGTTCAAGGA 1452
Query 1395 AGTGGAGAAAATTGTACCAGAGATCGAGAAGCAGAGAGTAAACACAAGTGGA-CAAACAC 1453
|||||||| ||||| |||||||||||||||| |||||||||||||| | || |||||||
Sbjct 1453 AGTGGAGAGAATTGCACCAGAGATCGAGAAGGAGAGAGTAAACACA-GAAGAGCAAACAC 1511
Query 1454 CAATCGAGATATTCACAAAGGAGCACCAAACATTGCGGCAAGAAGCTGAGAAATGTATGA 1513
| ||||||||||| |||||||||||||| | |||| |||||||| |||||||| ||||
Sbjct 1512 CGATCGAGATATTTGCAAAGGAGCACCAAGGACTGCGACAAGAAGCCGAGAAATGGATGA 1571
Query 1514 AATACACGGCGATGTCGTGCAGCTTAGTCGCGACTCTCATATTCACGGTCACCTTCGCGG 1573
|| |||| || ||||| ||||||||||||||| ||||||| ||| |||||| |||||||
Sbjct 1572 AAGACACAGCCATGTCATGCAGCTTAGTCGCGGCTCTCATCGTCATGGTCACTTTCGCGG 1631
Query 1574 C 1574
|
Sbjct 1632 C 1632
Score = 303 bits (164), Expect = 3e-81
Identities = 384/490 (78%), Gaps = 16/490 (3%)
Strand=Plus/Plus
Query 175 GTATACTATGATTATATGCAATTAAGTAAAGGAATAAGCCAAGGGAGTGTAGAAGTTGTG 234
||||| ||||| ||||| ||||||||| |||||||||||||||| |||||||||| |||
Sbjct 197 GTATATTATGAGTATATACAATTAAGTCAAGGAATAAGCCAAGGTCGTGTAGAAGTCGTG 256
Query 235 AAAGA-TGTCTTGAACCG-TCGGCCGGGCGCTGTGGACGAATGGATAAACCCTTATGAGA 292
|| || | ||||||| || || |||| ||| ||||||||||||||||||| ||| ||||
Sbjct 257 AAGGACT-TCTTGAA-CGATCATCCGGACGCAGTGGACGAATGGATAAACCTTTACGAGA 314
Query 293 CACCATTGTTGAAGGCTTGCGCATGTGGAAAACCCGAGATTGTTAAAGAGCTTCT-TCGT 351
| |||||||| |||||||| || ||||| |||||||||||||||||||||||||| | |
Sbjct 315 CGCCATTGTTAAAGGCTTGTGCTTGTGGGAAACCCGAGATTGTTAAAGAGCTTCTGT-GG 373
Query 352 CGCATGAAACCTGAACAAATGCTTCCCAAGATGAGCCGTCACACTTCATACCACACACCT 411
|| |||| ||||||||||||||||||||||||||||| || ||| |||||||| ||
Sbjct 374 CGTATGACACCTGAACAAATGCTTCCCAAGATGAGCCAAAACGTTTCGTACCACACGGCT 433
Query 412 CTCACTGTTGTCGCAGTCACCGGAAACATGGAGATCGCCAAATACTT-GCTTGACAAGAA 470
|| ||||| || || || | ||||| |||||||| || || ||| | | | ||||||
Sbjct 434 CTTACTGTCGTAGCGGTTAGTGGAAATATGGAGATTGCTGAAGCCTTAG-TCGCCAAGAA 492
Query 471 CTTTGGGCTGCTAAAGATGCCAG-ACATAAATGGACAGCTTCCGGCCGTGGTTGCAATTG 529
| | ||||||| |||| || | | || ||||||||| |||||| |||||||| |||
Sbjct 493 CCCTAAGCTGCTAGAGATTCCTGGA-ATCAATGGACAGATTCCGGTTGTGGTTGCGGTTG 551
Query 530 AGAACGGGCATAAAGAGATGGCTTGGTA-CTTTTACGTGCA-AACTATGCGTCCTC-TGT 586
||||| ||| | || |||||| | || |||| || || |||| | || | | |
Sbjct 552 AGAACACGCAGATGGAAATGGCTCGCTATCTTT-ACAC-CAGAACTCCG-GTTCAGGTCT 608
Query 587 TACTTGATCAAGATGGGTACCACGGTACCTTGCTCATTATCAACGCCATCTACTACAAAA 646
|||||| | |||| || || || ||||| |||||| || | || ||||||| ||| | ||
Sbjct 609 TACTTGCTGAAGACGGATATCATGGTACTTTGCTCTTTCTGAATGCCATCTTCTATAGAA 668
Query 647 TGATTGACAT 656
|| | |||||
Sbjct 669 TGCTCGACAT 678
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98091864930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5