BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg892385 Length=1293 Score E Sequences producing significant alignments: (Bits) Value AT5G06970.1 | Symbols: | Protein of unknown function (DUF810) ... 568 6e-161 > AT5G06970.1 | Symbols: | Protein of unknown function (DUF810) | chr5:2158228-2166398 REVERSE LENGTH=3781 Length=3781 Score = 568 bits (307), Expect = 6e-161 Identities = 383/419 (91%), Gaps = 7/419 (2%) Strand=Plus/Plus Query 668 TGATTTTGAGGACGATGATGATCTTGAGGAAGTTGGTAATTTCAGGATCTCAAGGCGAAC 727 ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct 743 TGATTTTGAAGACGATGATGATCTTGATGAAGTTGGTAATTTCAGGATCTCTAGGCGGAC 802 Query 728 TGCCGATGATGCGGCTGATCTTGTGCCAAAG-CTGCCCCTCCTTTGCGACTGGTATTACA 786 ||| ||||||| |||||||||||||| ||| ||| ||||||||||||||||||||||| Sbjct 803 TGCAAATGATGCTGCTGATCTTGTGCC-AAGACTG-CCCTCCTTTGCGACTGGTATTACC 860 Query 787 GATGATGATCTCTGTGAAACTGCATTTGAAATCCTGTTGGGTGGCGCTGGAGCTTCA-G- 844 |||||||||||| ||||||||||||||||||| || |||| | |||||||||||||| | Sbjct 861 GATGATGATCTCCGTGAAACTGCATTTGAAATACTTTTGGCTTGCGCTGGAGCTTCAGGA 920 Query 845 GGTCTCATAGCACCATCAAAAGAGaaaaaaaaaaGGAGAAGAGCAGGTCTAGGCTGAAGA 904 |||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||| | Sbjct 921 GGTCTCATAGTACCATCAAAAGAG--AAAAAGAAGGAGAAAAGCAGGTCTAGGCTGATTA 978 Query 905 GGAAGCTTGGTCGCAAAAGTGAGAGTGTTTCTCAGTCTCGGAGTTCATCAGGATTGGTTG 964 ||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct 979 AGAAGCTTGGTCGCAAAAGTGAGAGTGTTTCTCAATCTCAGAGCTCATCAGGATTGGTTT 1038 Query 965 CCCTTTTAGAAATGATGAGGGGCCGAATGGAGATTTCTGAGGCCATGGACATCAGAACAA 1024 | ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 1039 CTCTTTTAGAAATGATGCGGGGCCAAATGGAGATTTCTGAGGCCATGGACATCAGAACAA 1098 Query 1025 GACAGGGGTTGCTTGATGCCCTAGCGGGGAAAGTTGGCAAAAGAATGGACAGCCTCCTG 1083 |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1099 GACAAGGGTTGCTTAATGCCCTAGCGGGAAAAGTTGGCAAAAGAATGGACAGCCTCCTG 1157 Score = 171 bits (92), Expect = 2e-41 Identities = 102/107 (95%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1086 AAACATGTTAGCAGAGAGGCTCATTAACAATCCAGTTGTTGGGTGTGGAGAATCAGGTCG 1145 |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| Sbjct 1241 AAACATGTTAGCAGAGGGGCTCATTAACAATCCAGTTGTTGGATTTGGAGAATCAGGTCG 1300 Query 1146 TAGGGCAACTGACCTGAAGAGTCTTCTGCTAAGGATTGAAGGATCAG 1192 || |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1301 TAAGGCAACTGACCTGAAGAGTCTTCTGCTAAGGATTGAAGAATCAG 1347 Score = 119 bits (64), Expect = 8e-26 Identities = 74/79 (94%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 551 TGAATAGCGTGGGTACTGCTGATGAATTCTTTTTGGCTGCAAATCTTGAATCTTCTGGCT 610 |||| ||||||||||||||||||||||||||||||||| ||| || |||||||||||||| Sbjct 520 TGAACAGCGTGGGTACTGCTGATGAATTCTTTTTGGCTACAATTCCTGAATCTTCTGGCT 579 Query 611 CACCTCCAAAAAGGTCCCC 629 |||||||||||||| |||| Sbjct 580 CACCTCCAAAAAGGGCCCC 598 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63604090515 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5