BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg892386
Length=1950
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04700.1 | Symbols: | Ankyrin repeat family protein | chr5:... 1594 0.0
AT5G04690.1 | Symbols: | Ankyrin repeat family protein | chr5:... 859 0.0
AT5G04680.1 | Symbols: | Ankyrin repeat family protein | chr5:... 749 0.0
> AT5G04700.1 | Symbols: | Ankyrin repeat family protein | chr5:1354240-1356754
REVERSE LENGTH=2010
Length=2010
Score = 1594 bits (863), Expect = 0.0
Identities = 1505/1808 (83%), Gaps = 71/1808 (4%)
Strand=Plus/Plus
Query 175 GTATACTATGATTATATGCAATTAAGTAAAGGAATAAGCCAAGGGAATGTAGAGGAT-GT 233
||||| ||||| ||||| ||||||||| |||||||||||||||| |||||| || ||
Sbjct 229 GTATATTATGAGTATATACAATTAAGTCAAGGAATAAGCCAAGGTCGTGTAGA-AATCGT 287
Query 234 GAAAGATTTCTTGAA-CCGAAGTCCAGG-CGCAGTGGACGAATGGATAAACCCTTACGAG 291
||| || |||||||| | | ||| || | ||||||||||||||||||||| |||||||
Sbjct 288 GAAGGACTTCTTGAATCATCA-TCC-GGACTCAGTGGACGAATGGATAAACCTTTACGAG 345
Query 292 ACACCACTGTTGAAA-GCTTGCGCATAT-GGAAGACCCGAGATTGTTAAAGTGCTTCTTC 349
|| ||| |||| ||| ||||| || | | |||| ||||||||||||||||| |||||| |
Sbjct 346 ACGCCATTGTT-AAAGGCTTGTGCGTGTGGGAA-ACCCGAGATTGTTAAAGAGCTTCTAC 403
Query 350 GTCGCATGAAACCTGAACAAATGCTTCCCAAGATGAGCCATAACACTTCATACCACACAC 409
|||| |||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |
Sbjct 404 GTCGTATGACACCTGAACAAATGCTTCCCAAGATGAGCCAAAACGCTTCATACCACACGC 463
Query 410 CTCTCACTGTTGTAGCAGTCACCGGAAACATGGAGATTGCCAAATACTT-GCTTGGCAAG 468
||||||||||||| || || | ||||||||||||||||| || ||| | | | ||||
Sbjct 464 CTCTCACTGTTGTTGCGGTTAGTGGAAACATGGAGATTGCTGAAGCCTTAG-TCGCCAAG 522
Query 469 AACTTTGGGCTGCTAAAGATGCCGGGCATGAATGGACAGCTTCCAGCCGTGGTTGCAATT 528
||| | ||||||| |||| || || || |||||||| |||| | |||||||| ||
Sbjct 523 AACCCTAAGCTGCTAGAGATTCCTGGAATCAATGGACAAATTCCGGTTGTGGTTGCGGTT 582
Query 529 GAGAACGGGCATAAAGAGATGGCTCGGTACT-TTTACATGAAAACTATGCGTTC-TCTGT 586
||||| || | ||||||||||| || | |||||| | |||| | |||| |||
Sbjct 583 GAGAATACACAGATGGAGATGGCTCGCTA-TCTTTACACCAGAACTCCG-GTTCAAGTGT 640
Query 587 TACTTGATGAGGATGGGTACCACGGTACCTTGCTCATTATCAACGCCATCTACTACAAAA 646
||||||| | |||||||| |||||| | |||||| || |||| ||||||| ||| ||||
Sbjct 641 TACTTGACCAAGATGGGTATCACGGTTCTTTGCTCTTTCTCAATGCCATCTTCTATAAAA 700
Query 647 TGATCGACATTGCGTTGTGTTTTCTTTGCGCAA-A-GA-CACGCTAC-CTT-GCCGTCAC 701
|| | ||||| |||||| | || || ||| | || || | || ||| ||||||||
Sbjct 701 TGCTTGACATCGCGTTG-G--ATC--TGTTCAACATGAGCA-G--ACGCTTAGCCGTCAC 752
Query 702 AAAACACTTGCAGATAGAGTCGACT-CCCATCATCGTTTTAGCTTCAAAACCGGACCTTT 760
|||||||| ||| || ||||||| | |||||||| || || |||||||| || || ||||
Sbjct 753 AAAACACTCGCAAATCGAGTCGA-TACCCATCATTGTCTTGGCTTCAAAGCCAGATCTTT 811
Query 761 TTCCCAGCGGCTGCCGTCTCGGACCATTGGA-ACGCATT-ATATACGATTGTATACAAGT 818
|||| | |||||| ||| |||||||| || ||| || || ||| ||| ||||||||
Sbjct 812 TTCCTGGTGGCTGCTATCTTGGACCATT-GACACG-TTTCATCTACTCTTGGATACAAGT 869
Query 819 AAAGCT-TCAGGCTAAT-C-CAG-GTTGGTTTTATCCGAAA-AAAGATCAGCA-AACTAC 872
|||||| || || | | ||| || | | | | ||| | ||||||||| || |||
Sbjct 870 AAAGCTGCCA-ACTCTTCCACAGCCTT-CTCGT-T-C-AAACAGAGATCAGCAGAA-TAC 923
Query 873 CCTGATGAGGAAGCTGCT-TAAGTGTCTCTCCAAATGGACTGGAATAGATGAAGTGTACC 931
||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||
Sbjct 924 TCTGATGAGGAAACTGCTCAAAG-GCCTCTCCAAATGGACTGGAATAGATGAAGTGTACC 982
Query 932 AACTGAAGGTTATGCATCTACAAGCCAAGAAGCTTTTATTGGTAATATCAGAAGAAACAC 991
||| ||||| |||||||||||||||||||||||| || ||| ||||||||||||||||
Sbjct 983 GACTTAAGGTCATGCATCTACAAGCCAAGAAGCTTCTACTGGGAATATCAGAAGAAACAT 1042
Query 992 GGGCCATGGGATTAAAGGAACGTTCCGAGACAGTGGGTGAGGCCTTACTCTTTGCAGTGA 1051
|||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1043 TGGCCTTGGGCTTGAAGGAACGTTCCGAGACAGTGGATGAGGCTTTACTCTTTGCAGTGA 1102
Query 1052 GGTATGGGAATGTGGATTTCTTGGTGGAGATGATCAAGAA-CAACTCCGAGCTTCTATGG 1110
| |||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||
Sbjct 1103 GATATGGGAATGTGGATTTCTTGGTGGAAATGATCA-GAAACAACTCCGAGCTTCTATGG 1161
Query 1111 TCCACGAAAACGAGCTTGAGTAGAACTCTGTTTCTCTTGGCCGTCGAGTTGAGACAAGAA 1170
||||||| ||| |||| ||| || |||||||||||||||||||||||||| ||||||||
Sbjct 1162 TCCACGAGAACAAGCTCGAGCAGTACTCTGTTTCTCTTGGCCGTCGAGTTCAGACAAGAG 1221
Query 1171 AAAGTGTTTAGTCTACTCTACGGTCTGGACGATAGGAAGTACTTGTTGCTTGCGGA-AAG 1229
|| ||||||||||| || |||||||||||||| || |||||||||||||| || || |||
Sbjct 1222 AAGGTGTTTAGTCTCCTATACGGTCTGGACGACAGAAAGTACTTGTTGCTCGCAGACAAG 1281
Query 1230 GGACTGTGATGGCAATGGTATGCTTCATCTCGCCGGCTATCTTTCTCCTCCTTGCAAGCT 1289
| |||||||||| |||||| ||||||||||||| |||| || |||||||||| ||||||
Sbjct 1282 G-ACTGTGATGGAAATGGTGTGCTTCATCTCGCTGGCTTTCCGTCTCCTCCTTCCAAGCT 1340
Query 1290 CTCTACCGTTACTGGCGCAGCTTTGAAGATGCAACGTGAGTTACAATGGTTCAAGGAAGT 1349
||||| || ||||||| ||||| || ||||||| |||||||||||||||||||||||
Sbjct 1341 CTCTAGTGTCGTTGGCGCACCTTTGCAGTTGCAACGCGAGTTACAATGGTTCAAGGAAGT 1400
Query 1350 GGAGAAAATTGTACCAGAGATGGAGAAGCAGAGAGTAAACACAAGTGGA-CAAACACCAA 1408
||||| ||| | ||| ||||| |||||| |||||||||||||| | || |||||||| |
Sbjct 1401 GGAGAGAATCGCACCGGAGATCGAGAAGGAGAGAGTAAACACA-GAAGAGCAAACACCGA 1459
Query 1409 TCGAGATATTCACAAAGGAGCACCAAACATTGCGGCAAGAAGCTGAGAAATGTATGAAAT 1468
|||||||||||||||||||||||||| | |||| |||||||| |||||||| ||||||
Sbjct 1460 TCGAGATATTCACAAAGGAGCACCAAGGACTGCGACAAGAAGCAGAGAAATGGATGAAAG 1519
Query 1469 ACACGGCGATGTCGTGCAGCTTAGTCGCGACTCTCATATTCACGGTCACCTTCGCGGCCG 1528
||||||| ||||| ||||||||||||||| | ||||| ||||||||||||| ||||| |
Sbjct 1520 ACACGGCTATGTCATGCAGCTTAGTCGCGGCACTCATCGTCACGGTCACCTTTGCGGCGG 1579
Query 1529 TCTTCACCGTCCC------CA-A--CTACAACTCACACGGCAAACCCTTTCACCTACGTG 1579
||||||| ||||| || | | |||| ||| | || |||||||||||||||||||
Sbjct 1580 TCTTCACTGTCCCTGGTGGCACAGACGACAATTCAAAAGGTAAACCCTTTCACCTACGTG 1639
Query 1580 ATCGTGCT-TTCACCACATTCGTCGTCTCCGATCTGATCTCCTGCTTCGCAGCTTGCACC 1638
|||| || |||| || |||| ||||||| ||| |||||||||||||||| ||||||||
Sbjct 1640 ATCG-GCGATTCATCATATTCATCGTCTCAGATTTGATCTCCTGCTTCGCCTCTTGCACC 1698
Query 1639 TCCGTCCTCATTTTCCTCGGGATAC-ACACCGCAAGGTACTCCTTCGATGATTTCTTGTT 1697
||||||||||| ||||||||||||| | |||||||| ||||||||||| ||||||||| |
Sbjct 1699 TCCGTCCTCATCTTCCTCGGGATACTA-ACCGCAAGATACTCCTTCGACGATTTCTTGGT 1757
Query 1698 CTCGCTACCGGCAAAGATGATCGCCGGACTCTCCATACTGTTCGTTTCAATCGGGGCAAT 1757
|| || ||| |||||||||| |||||||| || ||||||||||||||||| | ||| ||
Sbjct 1758 CTTTCTGCCGACAAAGATGATTGCCGGACTTTCGATACTGTTCGTTTCAATAGCGGCGAT 1817
Query 1758 GCTTATTGCCTTCTCGTCGGCCCTATTCACGATGATGGATAAAGA-G--AAATGGATCGT 1814
|||||| || ||||||||||| |||||||||||||||| |||||| | |||||||| ||
Sbjct 1818 GCTTATAGCATTCTCGTCGGCGCTATTCACGATGATGGGTAAAGAAGGGAAATGGATTGT 1877
Query 1815 TGCTCCGACGATCCTTCTCGCTTGTTTACCGGCGCTGCTGTTTGTTCTGCTTCAGTATCC 1874
|||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1878 TGCTCCGACGATCCTTTTTGCTTGTTTACCGGCGCTGTTGTTTGTTCTGCTTCAGTATCC 1937
Query 1875 TCTCCTCAAAGAAATGATCTTTTCGACTTACGGCAAAGGAATCTTCGGCAGAAACATGAA 1934
||||||||| ||||||||||| || ||||| || ||||| ||||| | ||||||||||||
Sbjct 1938 TCTCCTCAAGGAAATGATCTTCTCCACTTATGGAAAAGGGATCTTTGACAGAAACATGAA 1997
Query 1935 ATGTTGGG 1942
||||||||
Sbjct 1998 ATGTTGGG 2005
> AT5G04690.1 | Symbols: | Ankyrin repeat family protein | chr5:1349643-1352525
REVERSE LENGTH=2016
Length=2016
Score = 859 bits (465), Expect = 0.0
Identities = 886/1086 (82%), Gaps = 41/1086 (4%)
Strand=Plus/Plus
Query 870 TACCCTGATGAGG-AAGCTGCTTAAGTGTCTCTCCAAATGGACT-GGAATAGATGAAGTG 927
|||||||||| || ||| |||| || |||||||||||||| | | || ||||||||||||
Sbjct 804 TACCCTGATGGGGAAAG-TGCTCAAATGTCTCTCCAAATGTA-TCGGGATAGATGAAGTG 861
Query 928 TACCAACTGAAGGTTATGCATCTACAAGCCAAGAAGCTTTTATTGGTAATATCAGAAGAA 987
|||| ||| ||||| |||||||||||||||||||| ||| || || |||||||||||||
Sbjct 862 TACCGACTTAAGGTCATGCATCTACAAGCCAAGAAACTTCTAAAGGGAATATCAGAAGAA 921
Query 988 ACACGGGCCATGGGATTAAAGGAACGTTCCGAGACAGTGGGTGAGGCCTTACTCTTTGCA 1047
||| |||| |||| || ||||||||||| ||| |||| | |||||| |||||||| |||
Sbjct 922 ACATTGGCCTTGGGCTTGAAGGAACGTTCTGAGTCAGTAGATGAGGCTTTACTCTTCGCA 981
Query 1048 GTGAGGTATGGGAATGTGGATTTCTTGGTGGAGATGATCAAGAACAACTCCGAGCTTCTA 1107
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 982 GTAAGATATGGGAATGTGGATTTCTTGGTGGAGATGATCAAGAACAACTCCGAGCTTCTA 1041
Query 1108 TGGTCCACGAAAACGAGCTTGAGTAGAACTCTGTTT--CTCTTGGCCGTCGAGTTGAGAC 1165
||||||||| ||| | |||| |||||||| | || | ||||| || | ||||
Sbjct 1042 TGGTCCACGGGAAC----T--AGTA---CTCTGTTTAACACT-G-CCGTCCAGGTCAGAC 1090
Query 1166 AAGAAAAAGTGTTTAGTCTACTCTACGGTCTGGACGATAGGAAGTACTTGTTGCTTGCGG 1225
|||| || ||||||||||| ||||||||||||| ||| |||||||||||||| || || |
Sbjct 1091 AAGAGAAGGTGTTTAGTCTCCTCTACGGTCTGGGCGACAGGAAGTACTTGTTTCTCGCCG 1150
Query 1226 A-AAGGGACTGTGATGGCAATGGTATGCTTCATCTCGCCGGCTATCTTTCTCCTCCTTGC 1284
| |||| || |||| || ||| || |||||||||| || ||||||| | ||||| || |
Sbjct 1151 ACAAGG-ACAGTGACGGAAATAGTGTGCTTCATCTTGCTGGCTATCCTCCTCCTAATTAC 1209
Query 1285 AAGCTCTCTACCGTTACTGGCGCAGCTTTGAAGATGCAACGTGAGTTACAATGGTTCAAG 1344
|||||| |||| || | ||||| | ||| |||||||||| |||||||||||||| |||
Sbjct 1210 AAGCTCGCTACGGTCGTTAGCGCAACGTTGCAGATGCAACGCGAGTTACAATGGTTTAAG 1269
Query 1345 GA-AGTGGAGAAAATTGTACCAGAGATGGAGAA-GCAGAGAGTAAACACAAGTGGA-CAA 1401
|| | |||||| ||| || || | ||| || || | |||||||||||||| | | |
Sbjct 1270 GAGA-TGGAGAGAATCGTGCCGGCGATCGAAAATG-AGAGAGTAAACACA-GAAAATCTG 1326
Query 1402 ACACCAATCGAGATATTCACAAAGGAGCACCAAACATTGCGGCAAGAAGCTGAGAAATGT 1461
||||| ||||||||||||| |||||||||| || || |||| | |||||| ||||| ||
Sbjct 1327 ACACCGATCGAGATATTCAGAAAGGAGCACGAAGCAATGCGACTAGAAGCCGAGAAGTGG 1386
Query 1462 ATGAAATACACGGCGATGTCGTGCAGCTTAGTCGCGACTCTCATATTCACGGTCACCTTC 1521
|||||| | || |||||||| ||||||||||| ||| ||||||| ||||||||||||||
Sbjct 1387 ATGAAAGATACTGCGATGTCTTGCAGCTTAGTAGCGGCTCTCATCGTCACGGTCACCTTC 1446
Query 1522 GCGGCCGTCTTCACCGTCCCC------A---ACTACAACTCACACGGCAAACCCTTTCAC 1572
||||| |||||||||||||| | || |||||||| ||| | ||||||||||
Sbjct 1447 GCGGCAATCTTCACCGTCCCCGGCGGCACGGACGACAACTCAGGCGGTAGACCCTTTCAC 1506
Query 1573 CTACGTGATCGTGCT-TTCACCACATTCGTCGTCTCCGATCTGATCTCCTGCTTCGCAGC 1631
| || ||| || | ||| || |||| |||||||||||||||||||||||||||| ||
Sbjct 1507 CGACATGAACGAA-TATTCGTCATATTCATCGTCTCCGATCTGATCTCCTGCTTCGCCGC 1565
Query 1632 TTGCACCTCCGTCCTCATTTTCCTCGGGATACACACCGCAAGGTACTCCTTCGATGATTT 1691
||||| ||||||||||| ||||||||||||| |||||| || ||| | ||||| |||||
Sbjct 1566 CTGCACTTCCGTCCTCATATTCCTCGGGATACTCACCGCGAGATACGCTTTCGACGATTT 1625
Query 1692 CTTGTTCTCGCTACCGGCAAAGATGATCGCCGGACTCTCCATACTGTTCGTTTCAATCGG 1751
|||||||||||| || || || |||||||| ||||| || | | |||| || || || |
Sbjct 1626 CTTGTTCTCGCTGCCTGCGAATATGATCGCTGGACTTTCGACATTGTTTGTCTCGATAGC 1685
Query 1752 GGCAATGCTTATTGCCTTCTCGTCGGCCCTATTCACGATGATGGATAAAGAGAAATGGAT 1811
||| |||||| | || |||||||||||| |||||||||| | ||| || |||||
Sbjct 1686 GGCGATGCTTGTGGCATTCTCGTCGGCCTTATTCACGATCTT---TAACGACCCTTGGAT 1742
Query 1812 CGTTGCTCCGACGATCCTTCT-CGCTTGTTTACCGGCGCTGCTGTTTGTTCTGCTTCAGT 1870
|||||||||||||||| |||| ||||||||| ||||||||| | |||||| || ||||||
Sbjct 1743 CGTTGCTCCGACGATC-TTCTTCGCTTGTTTCCCGGCGCTGTTATTTGTTATGATTCAGT 1801
Query 1871 ATCCTCTCCTCAAAGAAATGATCTTTTCGACTTACGGCAAAGGAATCTTCGGCAGAAACA 1930
|||||||||| || || ||||||| || |||||||||||| ||||||||| | ||||||
Sbjct 1802 ATCCTCTCCTTAAGGAGCTGATCTTCTCCACTTACGGCAAACGAATCTTCGACCGAAACA 1861
Query 1931 TGAAAT 1936
||||||
Sbjct 1862 TGAAAT 1867
> AT5G04680.1 | Symbols: | Ankyrin repeat family protein | chr5:1346238-1348857
REVERSE LENGTH=2165
Length=2165
Score = 749 bits (405), Expect = 0.0
Identities = 577/661 (87%), Gaps = 8/661 (1%)
Strand=Plus/Plus
Query 870 TACCCTGATGAGGAAGCTGCT-TAAGTGTCTCTCCAAATGGACTGGAATAGATGAAGTGT 928
||| ||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||
Sbjct 976 TACTCTGATGAGGAAACTGCTCAAAG-GTCTCTCCAAATGGACCGGAATAGATGAAGTGT 1034
Query 929 ACCAACTGAAGGTTATGCATCTACAAGCCAAGAAGCTTTTATTGGTAATATCAGAAGAAA 988
||| ||| ||||| |||||||||||||||||||||||| || ||| ||||||||||||||
Sbjct 1035 ACCGACTTAAGGTCATGCATCTACAAGCCAAGAAGCTTCTACTGGGAATATCAGAAGAAA 1094
Query 989 CACGGGCCATGGGATTAAAGGAACGTTCCGAGACAGTGGGTGAGGCCTTACTCTTTGCAG 1048
|| | || |||| || |||||||||||||||||||||| ||| || |||||||||||||
Sbjct 1095 CATTGACCTTGGGCTTGAAGGAACGTTCCGAGACAGTGGATGAAGCTTTACTCTTTGCAG 1154
Query 1049 TGAGGTATGGGAATGTGGATTTCTTGGTGGAGATGATCAAG-AACAACTCCGAGCTTCTA 1107
|||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct 1155 TGAGATATGGGAATGTGGATTTCTTGGTGGAAATGATC-AGAAACAACTCCGAGCTTCTA 1213
Query 1108 TGGTCCACGAAAACGAGCTTGAGTAGAACTCTGTTTCTCTTGGCCGTCGAGTTGAGACAA 1167
|||||||||| ||| |||| ||| || |||||||||||||||||||||||||| ||||||
Sbjct 1214 TGGTCCACGAGAACAAGCTCGAGCAGTACTCTGTTTCTCTTGGCCGTCGAGTTCAGACAA 1273
Query 1168 GAAAAAGTGTTTAGTCTACTCTACGGTCTGGACGATAGGAAGTACTTGTTGCTTGCGGA- 1226
|| || ||||||| ||| ||||||||||||||||| ||||||||||||||||| || ||
Sbjct 1274 GAGAAGGTGTTTAATCTCCTCTACGGTCTGGACGACAGGAAGTACTTGTTGCTCGCAGAC 1333
Query 1227 AAGGGACTGTGATGGCAATGGTATGCTTCATCTCGCCGGCTATCTTTCTCCTCCTTGCAA 1286
|||| || | || ||||||||| |||||||||||||||| | || ||||||||||| |||
Sbjct 1334 AAGG-ACAGCGACGGCAATGGTGTGCTTCATCTCGCCGGATTTCCTTCTCCTCCTTCCAA 1392
Query 1287 GCTCTCTACCGTTACTGGCGCAGCTTTGAAGATGCAACGTGAGTTACAATGGTTCAAGGA 1346
|||| ||| || | | ||||| ||||| ||||||||| ||||||||||||||||||||
Sbjct 1393 GCTCGCTAGTGTCATTTGCGCACCTTTGCGGATGCAACGCGAGTTACAATGGTTCAAGGA 1452
Query 1347 AGTGGAGAAAATTGTACCAGAGATGGAGAAGCAGAGAGTAAACACAAGTGGA-CAAACAC 1405
|||||||| ||||| ||||||||| |||||| |||||||||||||| | || |||||||
Sbjct 1453 AGTGGAGAGAATTGCACCAGAGATCGAGAAGGAGAGAGTAAACACA-GAAGAGCAAACAC 1511
Query 1406 CAATCGAGATATTCACAAAGGAGCACCAAACATTGCGGCAAGAAGCTGAGAAATGTATGA 1465
| ||||||||||| |||||||||||||| | |||| |||||||| |||||||| ||||
Sbjct 1512 CGATCGAGATATTTGCAAAGGAGCACCAAGGACTGCGACAAGAAGCCGAGAAATGGATGA 1571
Query 1466 AATACACGGCGATGTCGTGCAGCTTAGTCGCGACTCTCATATTCACGGTCACCTTCGCGG 1525
|| |||| || ||||| ||||||||||||||| ||||||| ||| |||||| |||||||
Sbjct 1572 AAGACACAGCCATGTCATGCAGCTTAGTCGCGGCTCTCATCGTCATGGTCACTTTCGCGG 1631
Query 1526 C 1526
|
Sbjct 1632 C 1632
Score = 383 bits (207), Expect = 4e-105
Identities = 518/665 (78%), Gaps = 33/665 (5%)
Strand=Plus/Plus
Query 175 GTATACTATGATTATATGCAATTAAGTAAAGGAATAAGCCAAGGGAATGTAGAGGAT-GT 233
||||| ||||| ||||| ||||||||| |||||||||||||||| |||||| | | ||
Sbjct 197 GTATATTATGAGTATATACAATTAAGTCAAGGAATAAGCCAAGGTCGTGTAGAAG-TCGT 255
Query 234 GAAAGATTTCTTGAACCGA--AGTCCAGG-CGCAGTGGACGAATGGATAAACCCTTACGA 290
||| || |||||||| ||| | ||| || ||||||||||||||||||||||| ||||||
Sbjct 256 GAAGGACTTCTTGAA-CGATCA-TCC-GGACGCAGTGGACGAATGGATAAACCTTTACGA 312
Query 291 GACACCACTGTTGAAAG-CTTGCGCATATGG-AAGACCCGAGATTGTTAAAGTGCTTCT- 347
||| ||| |||| |||| |||| || | ||| || ||||||||||||||||| ||||||
Sbjct 313 GACGCCATTGTT-AAAGGCTTGTGCTTGTGGGAA-ACCCGAGATTGTTAAAGAGCTTCTG 370
Query 348 TCGTCGCATGAAACCTGAACAAATGCTTCCCAAGATGAGCCATAACACTTCATACCACAC 407
| | || |||| |||||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct 371 TGG-CGTATGACACCTGAACAAATGCTTCCCAAGATGAGCCAAAACGTTTCGTACCACAC 429
Query 408 ACCTCTCACTGTTGTAGCAGTCACCGGAAACATGGAGATTGCCAAATACTT-GCTTGGCA 466
|||| ||||| ||||| || | ||||| ||||||||||| || ||| | | | ||
Sbjct 430 GGCTCTTACTGTCGTAGCGGTTAGTGGAAATATGGAGATTGCTGAAGCCTTAG-TCGCCA 488
Query 467 AGAACTTTGGGCTGCTAAAGATGCCGGGCATGAATGGACAGCTTCCAGCCGTGGTTGCAA 526
||||| | ||||||| |||| || || || ||||||||| |||| | ||||||||
Sbjct 489 AGAACCCTAAGCTGCTAGAGATTCCTGGAATCAATGGACAGATTCCGGTTGTGGTTGCGG 548
Query 527 TTGAGAACGGGCATAAAGAGATGGCTCGGTA-CTTTTACATGAAAACTATGCGTTCTC-T 584
|||||||| ||| | || |||||||| || |||| ||| | |||| | |||| |
Sbjct 549 TTGAGAACACGCAGATGGAAATGGCTCGCTATCTTT-ACACCAGAACTCCG-GTTCAGGT 606
Query 585 GTTACTTGATGAGGATGGGTACCACGGTACCTTGCTCATTATCAACGCCATCTACTACAA 644
||||||| ||| || || || || ||||| |||||| || | || ||||||| ||| |
Sbjct 607 CTTACTTGCTGAAGACGGATATCATGGTACTTTGCTCTTTCTGAATGCCATCTTCTATAG 666
Query 645 AATGATCGACATTGCGTTGTGTTTTCTTTGCGCAA-AGACACGCTAC-CTT-GCCGTCAC 701
|||| ||||||| || ||| | | | || || || || | || ||| ||||||||
Sbjct 667 AATGCTCGACATCGCATTG-GATCTGTTCAA-CATGAG-CA-G--ACGCTTAGCCGTCAC 720
Query 702 AAAACACTTGCAGATAGAGTCGACTCCCATCATCGTTTTAGCTTCAAAACCGGACCTTTT 761
|||||||||||| || ||||||| ||||||||| || || |||||||| || || |||||
Sbjct 721 AAAACACTTGCAAATCGAGTCGATTCCCATCATTGTCTTGGCTTCAAAGCCAGATCTTTT 780
Query 762 TCCCAGCGGCTGCCGTCTCGGACCATTGGA-ACGCATT-ATATACGATTGTATACAAGTA 819
||| | | |||| ||| ||||||||| | ||| || || ||| ||| |||||||||
Sbjct 781 TCCTGGTGACTGCTATCTTGGACCATTG-ACACGT-TTCATCTACTCTTGGATACAAGTA 838
Query 820 AAGCT 824
|||||
Sbjct 839 AAGCT 843
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96585848580
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5