BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg892608
Length=3435
Score E
Sequences producing significant alignments: (Bits) Value
AT5G06810.1 | Symbols: | Mitochondrial transcription terminati... 5175 0.0
> AT5G06810.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2108493-2112256 FORWARD LENGTH=3426
Length=3426
Score = 5175 bits (2802), Expect = 0.0
Identities = 3232/3439 (94%), Gaps = 32/3439 (1%)
Strand=Plus/Plus
Query 1 ATGAAACTTCTGCAAAACCCTAGTAGATTCACGTCTCTGCTCAAATGGGTATCACAACTT 60
|||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1 ATGAAACTTCGGCAAAACCCTAGTAGATTCACGTCTGTTCTCAAATGGGTATCACAACTT 60
Query 61 TCTCTAGAAACCCATTTAAAACCCCCAATTTCTGGAACTGAATTTCTCCTCCGACGTACC 120
|||||||||||||| ||||||||| ||||||||||||||| |||||||||||| || ||
Sbjct 61 TCTCTAGAAACCCAATTAAAACCCTCAATTTCTGGAACTGGGTTTCTCCTCCGATGTGCC 120
Query 121 CAAAACCCTAGATCTTTCGCCACCGTCACCGGTAACGAAGTTTCCAGTGAGAAATCGAAT 180
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 121 CAAACCCCTAGATCTTTCGCCACCGTCACCGGTAACGAAGTTTGCAGTGAGAAATCGAAA 180
Query 181 GTGAAGAGAACTCGAAATGGGTTTAGAATCACTCCCACA-ATTAGGAAATTAGCTGAGGA 239
||||||||||| ||||||||||||| ||||||||||| | |||||||||||||||||||
Sbjct 181 GTGAAGAGAACCCGAAATGGGTTTAAAATCACTCCCA-ATGTTAGGAAATTAGCTGAGGA 239
Query 240 AGCAATGTTGGATTACTTCTATTCCACTAGGGGTTTGCAGTACATGGTTGCTGAGAGTAT 299
||||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 240 AGCAATGTTGGATTATTTCTATTCCACTAGGGGTTTACAGTATATGGTTGCAGAGAGTAT 299
Query 300 GAGCAAGAACAGTCCAATGTTTATTGATAATCTTTTGAAGAAAGTTGATTGTGTTACTGC 359
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 300 GAGCAAGAACAGTCCAATTTTTATTGATAATCTTTTGAAGAAAGTTGATTGTGTTACTGC 359
Query 360 TTCTGATATCAACCAATCTATTACCCGATATCTACGGTTTCACCCGGTGAATGAATTCGA 419
|||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||
Sbjct 360 TTCTGATATCAACCAATCTATTACTCGATATCTACGGTTTCACCCTGTCAATGAATTCGA 419
Query 420 GCCTTTTCTTGAGAGTTCAGGTTTGAAGCCCACTGAGTATAGTCATTTGGTTCCCTGTGA 479
|||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct 420 GCCTTTCCTTGAGAGTTCAGGTTTGAATCCCAGTGAGTATAATCATTTGGTTCCCTGTGA 479
Query 480 TAAGGTCTTCTTGGAAGAAGAA-GCTTTTTTGCTTGAGAACCATCATGTTTTGTGTTATA 538
||||||||||||||| |||||| || |||||||| |||||||||||||||||||||||||
Sbjct 480 TAAGGTCTTCTTGGATGAAGAAGGC-TTTTTGCTGGAGAACCATCATGTTTTGTGTTATA 538
Query 539 GTGGTGTTGACCCTAAGAAGATTGGGAAGATCTTCAAGGAAGCTAGGGAAGTTTTTGGGT 598
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |
Sbjct 539 GTGGTGTTGACCCTAAGAGGATTGGGAAGATCTTCAAGGAAGCTAGGGAAGTTTTTAGTT 598
Query 599 ATGAAACCGGGGTTTTAGCTTCTAAGATTAAGGCGTAAGAGGATTTGGGGTTTAGCAGAT 658
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 599 ATGAAACCGGGGTTTTAGCTTCTAAGATTAAGGCGTATGAGGATTTGGGGTTTAGCAGAT 658
Query 659 AT-TTTCTATCGAAGCTTATCGTTTGTAGCCCGAGAATCTTGATTGGG-AATACGAATGT 716
| |||||||| ||||||||||||||||| |||||| |||||| |||| |||||||| |
Sbjct 659 -TGTTTCTATCTAAGCTTATCGTTTGTAGTCCGAGAGTCTTGA-TGGGTCATACGAATAT 716
Query 717 TGAACTTGCTAAGGTCT-TAAAGACGTTGAAATCCATGGGGTTTGAGTTTGATTGGGTAA 775
|||||| | | |||| | ||||||||||| |||| | ||||||||||| || |||||||
Sbjct 717 TGAACTGGTTCAGGT-TGTAAAGACGTTGCAATCTTTAGGGTTTGAGTTCGAGTGGGTAA 775
Query 776 TGGAGAACCTGTCAGATGAGGGGCCTTGTGATTGGAGCTCTGTGCATCGTGTTCTAAGCT 835
|||| ||| ||||||||||||| || ||||||||||||||||||||||||| ||||||
Sbjct 776 TGGAAAACTTGTCAGATGAGGGACC---TGATTGGAGCTCTGTGCATCGTGTTTTAAGCT 832
Query 836 TGCTTAGAGAAATCTGTTTTGATGAGGAAGAGCTATGTGGATTAATCAGGAAGTGTCCAA 895
||||||||||||||||||||||||||||| | |||| ||| ||||||||||| |||||||
Sbjct 833 TGCTTAGAGAAATCTGTTTTGATGAGGAAAAACTATATGGGTTAATCAGGAACTGTCCAA 892
Query 896 GACTGGTTTTTGAGAATTCAGGGAAATGGACAGTGATTCTAGTTGGGTTTGAAACAAAAC 955
| || ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 893 GTTTGCTTTTTGAGAATTCAGGGAAATGGACAGGGATTCTAGTTGGGTTTGAAACAAAGC 952
Query 956 TCGGGTCATCTAGAAGTGAACTATGTTTGTTGTTTCAAAAATTCCCGCTGATTCAAGTAG 1015
| ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 953 TTGGGGCATCTAGAAGTGAACTATGTTCGTTGTTTCAGAAATTCCCGCTGATTCAAGTAG 1012
Query 1016 AGAAATGTGTTTCGAATCTAAGGCAGTGCTTCTTGTTCTTGAAAGAGATCGAGATGGAAG 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013 AGAAATGTGTTTCGAATCTAAGGCAGTGCTTCTTGTTCTTGAAAGAGATCGAGATGGAAG 1072
Query 1076 ATGATGAGATTCATAAGGTTTTCCGTTCTCACTCCTGGTGGCTTGGTTCATGTAGGTTAA 1135
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1073 ATGATGAGATTCATAAGGTTTTCCGTTCTCATTCCTGGTGGCTTGGTTCATGTAAGTTAA 1132
Query 1136 AGAAAACCAGTAGCTTGCTTGTATTTTTGAAGGCTGGGAAAACCCGGGTTTGTCAGGTCA 1195
|||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct 1133 AGAAAACCAGTAGCTTGCTTGTGTTTTTGAAGGCTGGTAAAACTCGGGTTTGTCAGGTCA 1192
Query 1196 TTCAAGAAAGCCCAGAGGAGATGAAAAAATGGACAATGGGGTCAAAAATCCAGCCACTAC 1255
||||||||| ||| || ||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1193 TTCAAGAAAACCCTGAAGAGATGAAAAAATGGACAATGGGTTCAAAAATCCAGCCGTTAC 1252
Query 1256 CAGCTACCAACGTAGACATAGACTCGAAACT-AATGAAGACTCAGTTCTTGTTAGACCTC 1314
||||||||||||||||||| || |||||| | |||||||||||||||||| |||||||||
Sbjct 1253 CAGCTACCAACGTAGACATTGAGTCGAAA-TCAATGAAGACTCAGTTCTTATTAGACCTC 1311
Query 1315 GGATACAAAGAAAACTCCGAGGAAATGGAGAGTGCACTCAAGAATTTTCGTGGCAAAAGA 1374
||||||||||||||||| ||||||||||||| ||| | |||||||| ||||| ||| ||
Sbjct 1312 GGATACAAAGAAAACTCAGAGGAAATGGAGACAGCAATGAAGAATTTCCGTGGTAAAGGA 1371
Query 1375 TCTGAACTCCGAGAGAGATTTAATGTCCTCGTAAGTTTGGGTTTTACCGAGAAAGATGTC 1434
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1372 TCAGAACTCCGAGAGAGATTTAATGTCCTCGTAAGTTTGGGTTTTACCAAGAAAGATGTC 1431
Query 1435 AAAGATATGGTGAAAGCATGTCCTACTATGCTCTCCCAGACCTGTGATATACTAGAATCA 1494
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1432 AAAGATATGGTGAAAGCATGTCCTACTATGCTCTCCCAGACCTGTGATATCCTAGAATCA 1491
Query 1495 AAGGTGAACTACCTTATAAACGAATTAGGTTATCCTCATTCGACTTTGGTAGATTTCCCT 1554
|||||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||
Sbjct 1492 AAGGTGAACTACCTTATAAAGGAATTAGGTTATCCGCTTTCGACTTTGGTGGATTTCCCT 1551
Query 1555 TCATGTTTAAAGTTCACTCTTCAGCGGATGAAGCTCAGATTTGCAATGTTCTCTTGGCTT 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 TCATGTTTAAAGTTCACTCTTCAGCGGATGAAGCTCAGATTTGCAATGTTCTCTTGGCTT 1611
Query 1615 CAAGCCCGAGGAAAAGTAGACCGCAAGATCAAAGTTAGTACTATGCTCGCTTGCTCGGAC 1674
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 1612 CAAGCCCGAGGAAAAGTAGACCGCAAGATCAAAGTTAGCACAATGCTCGCTTGCTCGGAC 1671
Query 1675 AAAATTTTCGTGATAATGTCTTTTATGCGAAACCCTAGATTCAAAAG---TCTTCTCAAT 1731
||||| ||| | |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1672 AAAATATTC--G-TAATGTCTTTTATGCGAAACCCTAGATTCAAAAGTCTTCTTCTCAAT 1728
Query 1732 TGGGTATCACAAGCTTTTACAGAAACCCCTTTTAAACCCCAAGTTTCAGGAGGAAACCCT 1791
|||||||||||||||||| ||||||||||||| ||||||||| |||| | ||||||||
Sbjct 1729 TGGGTATCACAAGCTTTTGCAGAAACCCCTTTAAAACCCCAACTTTC--TA-GAAACCCT 1785
Query 1792 AGATCTTTCGCCACCCAGAGAGCACTCGTCGATGCTGAAGTTTCCGGCGAGAAATGGGGT 1851
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1786 AGATTTTTCGCCACCCAAAGAGCACTCGTCGATGCTGAAGTTTCCGGCGAGAAATGGGGT 1845
Query 1852 CTTAGAACTCGAAACGAGATTCGTAAAGTGGCTCAGGTTGCGATGTTTGATTACTTCTAT 1911
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1846 CTTAGAACTCGAAACGAGATTCGTAAAGTGGCTCAAGTTGCGATGTTTGATTACTTTTAT 1905
Query 1912 CAAACGAGAGGTTTGCAGTTTCTGGTTGCTGAGAGTATGAGTAGGAATGCTCCTGTTTTT 1971
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1906 CAAACGAGAGGTTTGCAGTTTCTGGTTGCTGAGAGTATGAGTAAGAATGCTCCTGTTTTT 1965
Query 1972 AATGATAATCTTTTGAAGAAGCTAAATGGTTGtgatgttga---tgatgatgatgatg-- 2026
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1966 AATGATAATCTTTTGAAGAAGCTTAATGGTTGTGATGTTGATGTTGATGATGATGATGAT 2025
Query 2027 -TAGTTAAAGCCATTACTAGGTTTCTATGGTTTCATCCTGTGAATGAATTTGAGCCTTTT 2085
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 2026 ATAGTTAAAGCTATTACTAGGTTTCTATGGTTTCATCCTGTTAATGAATTTGAGCCCTTT 2085
Query 2086 TTAGAGAGTTTAGGTTTGAAGCCGTCAGAGTTTAGTCACTTGATTCCTTGTGATAAGATG 2145
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2086 TTAGAGAGTTTAGGTTTGAAGCCGTCAGAGTTTAGTCATTTGATTCCTTGTGATAAGATG 2145
Query 2146 TTTTTGAATGAAGATGCTTTTTTGTTGGAGAATTATCATGTGTTTTGGAACTATGGAATT 2205
|||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||
Sbjct 2146 TTTTTGAATGAAGATGCTTTTTTGCTGGAGAACTATCATGTCTTTTGGAACTATGGAATT 2205
Query 2206 GGAAGAGAGAAGATGAGGAAGATCTTTAAGGAAGCTAGGGAAGTTTTCGGGTATGAAACC 2265
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2206 GGAAGGGAGAAGATGGGGAAGATCTTTAAGGAAGCTAGGGAAGTTTTCGGGTATGAAACC 2265
Query 2266 GGGGTTTTAGCTTCCAAGATTAAGGCTTATGAGGATTTGGGGTTTAGCAAGTTGTTTCTA 2325
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 2266 GGGGTTTTAGCTTCCAAGATTAAGTCTTATGAGGATTTGGGGTTTAGCAAATTGTTTCTA 2325
Query 2326 TCGAAACTTATCGTTTGTAGCCCGAGTATTTTGATTGGGAATGCGAATGTTGGACTGGCG 2385
||||||||||| ||||||||||| ||||| ||||||||| || |||||||||||||||
Sbjct 2326 TCGAAACTTATAGTTTGTAGCCCAAGTATCTTGATTGGGGATATGAATGTTGGACTGGCT 2385
Query 2386 AAGGTCATGGAGATGCTGAAAGCTATTAGTTTTGGTGTCGATTGGGTAACAGAGAACTTG 2445
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 2386 AAGGTCATGGAGATGCTGAAAGCTATTGGTTTTGGTGTTGATTGGGTAACAGAGAACTTG 2445
Query 2446 TCAGAGGAGGTGTCTTATGATTGGAGCTCTATGCATAGGTGTCTAAGTTTTCTCAGAGAT 2505
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 2446 TCAGAGGAGGTGTCTTATGATTGGAGCTCTATGCATAGATGTCTAAGTTTTCTTAGAGAT 2505
Query 2506 ATGTGTGTTGATGAGAATGAGCTACGTGAGTTAATCAGGAAGCGGCCAAAACTAATTTTC 2565
||| ||||||||| ||||||||| ||||||||||||| ||| ||||| ||| ||||||
Sbjct 2506 TTGTATGTTGATGAAAATGAGCTATGTGAGTTAATCAGAAAGATGCCAAGACTTATTTTC 2565
Query 2566 GAGGATTCAGGGGAATGGACAATGATTCTAGCTGGGTTTGAAGCAAAACTAGGGTCATCC 2625
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2566 GAGGATTCAGGGGAATGGACATTGATTCTAGCTGGGTTTGAAGCAAAACTAGGGTCATCC 2625
Query 2626 AGAAGTGAACTCTCTTCGTTGTTTCAGAAATTCCCACAGAGTCAGAGTATAGGTAAATTT 2685
||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||
Sbjct 2626 AGAAGTGAACTCTCTTCGTTGTTTCAGAAATTCCCTCAGTGTCAGAGTTTAGGTAAATTT 2685
Query 2686 GTTTCGAATTTAAGGCATTGCTTCTTGTTCCTGAAAGATATTGATATGGAGGCTGATGAA 2745
|||| |||||||||||||||||||||||| |||||||||||||| ||||| | ||| ||
Sbjct 2686 GTTTTGAATTTAAGGCATTGCTTCTTGTTTCTGAAAGATATTGAGATGGATGATGACGAG 2745
Query 2746 ATCGGTAAGATTTTCCGTTTGCATTCTTCGTGGCTTGGTGTAACTCGTTTGAAGCAAACC 2805
||||||||||||||||||||||| |||| |||| |||||||| |||||||||||||||||
Sbjct 2746 ATCGGTAAGATTTTCCGTTTGCACTCTTTGTGGATTGGTGTATCTCGTTTGAAGCAAACC 2805
Query 2806 AGTACCTTACTTATCAATTTGAAAGGTGGGAAAGGGCGGCTTTGTCAAGTCATTCAGGAA 2865
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct 2806 AGTACCTTACTTATCAATTTGAAGGGTGGGAAAGGGCGGCTATGTCAAGTCATTCAAGAA 2865
Query 2866 AATCCAGAAGAGATGAAAAAATGGATTATGGGGTTAAGAGTCCAGCCGTTACCAGCTACT 2925
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2866 AATCCAGAAGAGATGAAAAAATGGATTATGGGGTTAAGAGTCCAGCCATTACCAGCTACT 2925
Query 2926 GGATGCAAGGTAGACACAAAGTCGAAAACAATGAAGACTCAGTTCTTGTTAGACCTCGGA 2985
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2926 GGATACAAGGTAAACACAAAGTCGAAAACAATGAAGACTCAGTTCTTGTTAGACCTCGGA 2985
Query 2986 TACAAAGAAAACTCTGAGGAAATGGAGAGAGCACTCAAGAATTTCCGTGGCAAAGGATCT 3045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2986 TACAAAGAAAACTCTGAGGAAATGGAGAGAGCACTCAAGAATTTCCGTGGCAAAGGATCT 3045
Query 3046 GAACTCCGAGAGAGATTTAATGTGCTCGTGAGTTTTGGTTTTACCGAGAAAGATGTCAAA 3105
||||||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||
Sbjct 3046 GAACTCCGAGAGAGATTTAATGTCCTCGTGAGTTTCGGTCTTACTGAGAAAGATGTCAAA 3105
Query 3106 GATATGGTGAAAGCATGTCCTAGTATCCTCTCCCAGGCATGTGATATCTTAGAATCAAAG 3165
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3106 GATATGGTGAAAGCATGTCCTAGTATCCTCACCCAGGCATGTGATATCTTAGAATCAAAG 3165
Query 3166 GTTAACTACCTTATAAACGAATTAGGTCATCCGCTTTCGACATTGGTGACTTTCCCAACA 3225
|| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3166 GTGAACTACCTTGTAAAGGAATTAGGTTATCCGCTTTCGACATTGGTGACTTTCCCAACA 3225
Query 3226 TGTCTTAAGTACACTCTTCAGCGGATGAAGCTTCGATTTGCAATGTTCTCTTGGCTTCAA 3285
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3226 TGTCTTAAGTACACTCTTCAGCGGATGAAGCTTCGATTTTCAATGTTCTCTTGGCTTCAA 3285
Query 3286 GATCGAGGAAAGGCAGACCCAAAGCTTGCA-GTTAGTACTATACTTGTGTGCTCTGACAA 3344
||||||||||| ||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct 3286 GATCGAGGAAAAGCAGACCCAAAGCTT-CAAGTTAGTACTATACTTGTGTGCTCGGACAA 3344
Query 3345 GTTCTTTGCCACTAGATTTGTAAACCGTCACCCCGATGGGGCTAAGCATTTGGAAGACCT 3404
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3345 GTTCTTTGCCACTAGATTTGTAAACCGTCACCCCGATGGGCCTAAGCATTTGGAAGACCT 3404
Query 3405 GAAGAAACTGTTTCTGTGT 3423
||||||||| || |||||
Sbjct 3405 GAAGAAACTACTTGTGTGT 3423
Score = 1201 bits (650), Expect = 0.0
Identities = 1225/1490 (82%), Gaps = 90/1490 (6%)
Strand=Plus/Plus
Query 244 ATGTTGGATTACTTCTATTC-CACTAGGGGTTTGCAG-TACATGGTTGCTGAGAGTATGA 301
||||| |||||||| || || || || ||||||||| | | ||||||||||||||||||
Sbjct 1888 ATGTTTGATTACTTTTA-TCAAACGAGAGGTTTGCAGTTTC-TGGTTGCTGAGAGTATGA 1945
Query 302 GCAAGAACAG-TCCAATGTTTATTGATAATCTTTTGAAG-A----AA--G-T-TGA--TT 349
| ||||| | ||| | |||| |||||||||||||||| | || | | ||| ||
Sbjct 1946 GTAAGAA-TGCTCCTGTTTTTAATGATAATCTTTTGAAGAAGCTTAATGGTTGTGATGTT 2004
Query 350 G-TGTT-ACTGCT--T-CTGATATCA-ACCAATCTATTACCCGATATCTACGGTTTCACC 403
| |||| | || | | |||||| | || ||||||| | | |||| ||||||| |
Sbjct 2005 GATGTTGA-TGATGATGATGATAT-AGTTAAAGCTATTACTAGGTTTCTATGGTTTCATC 2062
Query 404 CGGTGAATGAATTCGAG-CCTTTTCTTGAGAGTTCAGGTTTGAAGCCCACTGAGTATAGT 462
| || |||||||| ||| |||||| | ||||||| |||||||||||| | |||| ||||
Sbjct 2063 CTGTTAATGAATTTGAGCCCTTTT-TAGAGAGTTTAGGTTTGAAGCCGTCAGAGTTTAGT 2121
Query 463 CATTTGGTTCCCTGTGATAAGGTCTTCTTGGAA-GAAGAAGCTTTTTTGCTTGAGAACCA 521
|||||| |||| ||||||||| | || || ||| ||||| ||||||||||| |||||| |
Sbjct 2122 CATTTGATTCCTTGTGATAAGATGTT-TTTGAATGAAGATGCTTTTTTGCTGGAGAACTA 2180
Query 522 TCATGT-TTTGTGTTA-TAGTGGTGTT-GACCCTAAGAAGATTGGGAAGATCTTCAAGGA 578
|||||| ||| || | || ||| || || ||||||| ||||||||||| |||||
Sbjct 2181 TCATGTCTTT-TGGAACTA-TGGAATTGGA-AGGGAGAAGATGGGGAAGATCTTTAAGGA 2237
Query 579 AGCTAGGGAAGTTTTTGGGTATGAAACCGGGGTTTTAGCTTCTAAGATTAAGGCGTAAGA 638
||||||||||||||| |||||||||||||||||||||||||| ||||||||| | || ||
Sbjct 2238 AGCTAGGGAAGTTTTCGGGTATGAAACCGGGGTTTTAGCTTCCAAGATTAAGTCTTATGA 2297
Query 639 GGATTTGGGGTTTAGCAGATAT-TTTCTATCGAAGCTTATCGTTTGTAGCCCGAGAATCT 697
||||||||||||||||| || | ||||||||||| ||||| ||||||||||| || ||||
Sbjct 2298 GGATTTGGGGTTTAGCAAAT-TGTTTCTATCGAAACTTATAGTTTGTAGCCCAAGTATCT 2356
Query 698 TGATTGGGAATACGAATGTTGAACTTGCTAAGGTCTTAAAGACGTTGAAATCCATGGGGT 757
|||||||| ||| |||||||| ||| ||||||||| | ||| | ||||| | || || |
Sbjct 2357 TGATTGGGGATATGAATGTTGGACTGGCTAAGGTCATGGAGATGCTGAAAGCTATTGGTT 2416
Query 758 TTGAGT-TTGATTGGGTAATGGAGAACCTGTCAGATGAGGGGCCTTGTGATTGGAGCTCT 816
||| || |||||||||||| |||||| ||||||| |||| | ||| |||||||||||||
Sbjct 2417 TTG-GTGTTGATTGGGTAACAGAGAACTTGTCAGAGGAGGTGTCTTATGATTGGAGCTCT 2475
Query 817 GTGCATCG-TGTTCTAAGCTTGCTTAGAGAAATCTGT-T-TTGATGAGGAA-GAGCTATG 872
||||| | || |||||| || ||||||| || ||| | ||||||| || ||||||||
Sbjct 2476 ATGCATAGATG-TCTAAGTTTTCTTAGAG--ATTTGTATGTTGATGA-AAATGAGCTATG 2531
Query 873 TGGA-TTAATCAGGAAG-TGTCCAAGACTGGTTTTTGAGAATTCAGGGAAATGGACAGTG 930
| || |||||||| ||| || |||||||| |||| ||| |||||||| |||||||| ||
Sbjct 2532 T-GAGTTAATCAGAAAGATG-CCAAGACTTATTTTCGAGGATTCAGGGGAATGGACATTG 2589
Query 931 ATTCTAGTTGGGTTTGAAACAAAACTCGGGTCATCTAGAAGTGAACTATGTTTGTTGTTT 990
||||||| |||||||||| ||||||| |||||||| ||||||||||| | || |||||||
Sbjct 2590 ATTCTAGCTGGGTTTGAAGCAAAACTAGGGTCATCCAGAAGTGAACTCTCTTCGTTGTTT 2649
Query 991 CAAAAATTCCCGCTGAT-TCA-AG--TAGAG-AAATGTGTTTCGAATCTAAGGCAGTGCT 1045
|| |||||||| | | | ||| || ||| | |||| ||||| |||| ||||||| ||||
Sbjct 2650 CAGAAATTCCCTCAG-TGTCAGAGTTTAG-GTAAATTTGTTTTGAATTTAAGGCATTGCT 2707
Query 1046 TCTTG-TTCTTGAAAGAGATCGAGATGGAAGATGATGAGATTC-ATAAGGTTTTCCGTTC 1103
||||| ||| ||||||| || |||||||| ||||| |||| || |||| |||||||||
Sbjct 2708 TCTTGTTTC-TGAAAGATATTGAGATGGATGATGACGAGA-TCGGTAAGATTTTCCGTT- 2764
Query 1104 T-CACTCCTGGTGGCTTGGT-TCATGTAGGTTAAAGAAAACCAGTAGCTTGCTTGT-ATT 1160
| ||||| | |||| ||||| | || | | || ||| ||||||||| ||| ||| | |
Sbjct 2765 TGCACTCTTTGTGGATTGGTGT-ATCTCGTTTGAAGCAAACCAGTACCTTACTTATCA-A 2822
Query 1161 TTTGAAGGCTGGGAAAACCCGGGTTTGTCAGGTCATTCAAGAAAGCCCAGAGGAGATGAA 1220
|||||||| ||||||| ||| | ||||| ||||||||||||| ||||| ||||||||
Sbjct 2823 TTTGAAGGGTGGGAAAGGGCGGCTATGTCAAGTCATTCAAGAAAATCCAGAAGAGATGAA 2882
Query 1221 AAAATGGACAATGGGGTCAAAAATCCAGCCACTACCAGCTAC------CAACGTAGACAT 1274
|||||||| ||||||| || | |||||||| |||||||||| ||| ||| |||
Sbjct 2883 AAAATGGATTATGGGGTTAAGAGTCCAGCCATTACCAGCTACTGGATACAAGGTAAACAC 2942
Query 1275 AGACTCG-AAACTAATGAAGACTCAGTTCTTGTTAGACCTCGGATACAAAGAAAACTCCG 1333
| | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2943 AAAGTCGAAAAC-AATGAAGACTCAGTTCTTGTTAGACCTCGGATACAAAGAAAACTCTG 3001
Query 1334 AGGAAATGGAGAGTGCACTCAAGAATTTTCGTGGCAAAAGATCTGAACTCCGAGAGAGAT 1393
||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 3002 AGGAAATGGAGAGAGCACTCAAGAATTTCCGTGGCAAAGGATCTGAACTCCGAGAGAGAT 3061
Query 1394 TTAATGTCCTCGTAAGTTTGGGTTTTACCGAGAAAGATGTCAAAGATATGGTGAAAGCAT 1453
||||||||||||| ||||| ||| |||| |||||||||||||||||||||||||||||||
Sbjct 3062 TTAATGTCCTCGTGAGTTTCGGTCTTACTGAGAAAGATGTCAAAGATATGGTGAAAGCAT 3121
Query 1454 GTCCTACTATGCTCTCCCAGACCTGTGATATACT-AGAATCAAAGGTGAACTACCTTATA 1512
|||||| ||| ||| ||||| | |||||||| || |||||||||||||||||||||| ||
Sbjct 3122 GTCCTAGTATCCTCACCCAGGCATGTGATAT-CTTAGAATCAAAGGTGAACTACCTTGTA 3180
Query 1513 AACGAATTAGGTTATCCTCATTCGACTTTGGTAGA-TTTCCCTTCATGT-TTAAAGTTCA 1570
|| |||||||||||||| | |||||| ||||| || |||||| ||||| |||| || ||
Sbjct 3181 AAGGAATTAGGTTATCCGCTTTCGACATTGGT-GACTTTCCCAACATGTCTTAA-GTACA 3238
Query 1571 CTCTTCAGCGGATGAAGCT-CAGATTTGCAATGTTCTCTTGGCTTCAAGCCCGAGGAAAA 1629
||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||||||
Sbjct 3239 CTCTTCAGCGGATGAAGCTTC-GATTTTCAATGTTCTCTTGGCTTCAAGATCGAGGAAAA 3297
Query 1630 GTAGACCGCAA-GAT-CAAAGTTAGTACTATGCTCGCT-TGCTCGGACAA 1676
| ||||| ||| | | ||| ||||||||||| || | | |||||||||||
Sbjct 3298 GCAGACC-CAAAGCTTCAA-GTTAGTACTATACTTG-TGTGCTCGGACAA 3344
Score = 1059 bits (573), Expect = 0.0
Identities = 1193/1482 (80%), Gaps = 83/1482 (6%)
Strand=Plus/Plus
Query 1894 ATGTTTGATTACTTCTA-TCAAACGAGAGGTTTGCAGTTTCTGGTTGCTGAGAGTATGAG 1952
||||| ||||| ||||| || || || ||||| |||| | ||||||| |||||||||||
Sbjct 244 ATGTTGGATTATTTCTATTC-CACTAGGGGTTTACAGTATATGGTTGCAGAGAGTATGAG 302
Query 1953 TAGGAA-TGCTCCTGTTTTTAATGATAATCTTTTGAAGAAGCTAAATGGTTGtgatgttg 2011
| ||| | ||| |||||| |||||||||||||||| | || | | | || ||||
Sbjct 303 CAAGAACAG-TCCAATTTTTATTGATAATCTTTTGAAG-A---AAGTTGAT-TG-TGTT- 354
Query 2012 a-tgatgatgatgatgTAGTTAAAGCCATTACTAGGTTTCTATGGTTTCATCCTGTGAAT 2070
| || | |||| || | || | |||||| | | |||| ||||||| ||||| |||
Sbjct 355 ACTGCTTCTGAT-AT-CA-ACCAATCTATTACTCGATATCTACGGTTTCACCCTGTCAAT 411
Query 2071 GAATTTGAGCCTTT-TTTAGAGAGTTTAGGTTTGAA-GCC-GTCAGAGTTTAGTCACTTG 2127
||||| |||||||| || ||||||| ||||||||| || || |||| || ||| |||
Sbjct 412 GAATTCGAGCCTTTCCTT-GAGAGTTCAGGTTTGAATCCCAGT--GAGTATAATCATTTG 468
Query 2128 ATTCCTTGTGATAAGATGTTTTTGAATGAAG-ATGCTTTTTTGTTGGAGAATTATCATGT 2186
|||| ||||||||| | || ||| |||||| | || |||||| ||||||| |||||||
Sbjct 469 GTTCCCTGTGATAAGGTCTTCTTGGATGAAGAAGGC-TTTTTGCTGGAGAACCATCATGT 527
Query 2187 GTTT-TGGAACTA-TGGAATTGGA--AGAGAGAAGA-TGAGGAAGATCTTTAAGGAAGCT 2241
||| || | || ||| || || | ||| || || |||||||||| |||||||||
Sbjct 528 -TTTGTGTTA-TAGTGGTGTT-GACCCTA-AGAGGATTG-GGAAGATCTTCAAGGAAGCT 582
Query 2242 AGGGAAGTTTTCGGGTATGAAACCGGGGTTTTAGCTTCCAAGATTAAGGCTTATGAGGAT 2301
||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 583 AGGGAAGTTTTTAGTTATGAAACCGGGGTTTTAGCTTCTAAGATTAAGGCGTATGAGGAT 642
Query 2302 TTGGGGTTTAGCAAG-TTGTTTCTATCGAAACTTATCGTTTGTAGCCCGAGTA-TTTTGA 2359
|||||||||||| || ||||||||||| || |||||||||||||| ||||| | | ||||
Sbjct 643 TTGGGGTTTAGC-AGATTGTTTCTATCTAAGCTTATCGTTTGTAGTCCGAG-AGTCTTGA 700
Query 2360 TTGGG-AATGCGAATGTTGGACTGGCGAAGGTCATGGAGATGCTGAAAGCTATTA-GTTT 2417
|||| || ||||| ||| ||||| |||| | ||| | || || || ||| | ||
Sbjct 701 -TGGGTCATACGAATATTGAACTGGTTCAGGTTGTAAAGACGTTGCAATCT-TTAGGGTT 758
Query 2418 TG-GTGTCGATTGGGTAACAGAGAACTTGTCAGAGGAGGTGTCTTATGATTGGAGCTCTA 2476
|| || |||| ||||||| || ||||||||||| |||| | | |||||||||||||
Sbjct 759 TGAGT-TCGAGTGGGTAATGGAAAACTTGTCAGATGAGG-GAC--CTGATTGGAGCTCTG 814
Query 2477 TGCATAGGTG-TCTAAGTTTTCTCAGAGATATGTGTGTTGATGA-GAATGAGCTACGTGA 2534
||||| ||| | |||| || || ||||| || ||| ||||||| ||| | ||| ||
Sbjct 815 TGCAT-CGTGTTTTAAGCTTGCTTAGAGAAATCTGTTTTGATGAGGAA-AAACTATATGG 872
Query 2535 GTTAATCAGGAAGC-GGCCAAAACTAATTTTCGAGGATTCAGGGGAATGGACAATGATTC 2593
|||||||||||| | | |||| | |||| ||| |||||||| |||||||| |||||
Sbjct 873 GTTAATCAGGAA-CTGTCCAAGTTTGCTTTTTGAGAATTCAGGGAAATGGACAGGGATTC 931
Query 2594 TAGCTGGGTTTGAAGCAAAACTAGGGTCATCCAGAAGTGAACTCTCTTCGTTGTTTCAGA 2653
||| |||||||||| |||| || ||| |||| ||||||||||| | ||||||||||||||
Sbjct 932 TAGTTGGGTTTGAAACAAAGCTTGGGGCATCTAGAAGTGAACTATGTTCGTTGTTTCAGA 991
Query 2654 AATTCCCACAGAGTCAGAGTATAGGTAAATTTGTTTCGAATTTAAGGCATTGCTTCTTGT 2713
||||||| | || ||| |||| | | |||| |||||||||| ||||||| ||||||||||
Sbjct 992 AATTCCCGCTGATTCA-AGTAGA-G-AAATGTGTTTCGAATCTAAGGCAGTGCTTCTTGT 1048
Query 2714 TCCTGAAAGATATTGATATGGAGGCTGATGA-AATCGGTAAGATTTTCCGTT-TGCATTC 2771
|| ||||||| || || ||||| | |||||| | || |||| ||||||||| | |||||
Sbjct 1049 TCTTGAAAGAGATCGAGATGGAAGATGATGAGATTC-ATAAGGTTTTCCGTTCT-CATTC 1106
Query 2772 TTCGTGGCTTGGTGT-AACT-CGTTTGAAGCAAACCAGTACCTTACTTATCAATTTGAAA 2829
| |||||||||| | | | | || ||| ||||||||| ||| ||| | |||| ||
Sbjct 1107 CTGGTGGCTTGGT-TCATGTAAG-TTAAAGAAAACCAGTAGCTTGCTTGTGTTTTTG-AA 1163
Query 2830 GG-TGGGAAAGGGCGGCTTTGTCAAGTCATTCAGGAAAATCCAGAAGAGATGAAAAAATG 2888
|| ||| ||| ||| ||||||| |||||||| ||||| || |||||||||||||||||
Sbjct 1164 GGCTGGTAAAACTCGGGTTTGTCAGGTCATTCAAGAAAACCCTGAAGAGATGAAAAAATG 1223
Query 2889 GATTATGGGGTT-AAGAGTCCAGCCGTTACCAGCTACTGGATGCAAGGTAGACACAAAGT 2947
|| || ||||| || | ||||||||||||||||||| ||| ||||||| |||
Sbjct 1224 GACAAT-GGGTTCAAAAATCCAGCCGTTACCAGCTAC------CAACGTAGACATTGAGT 1276
Query 2948 CGAAAACAATGAAGACTCAGTTCTTGTTAGACCTCGGATACAAAGAAAACTCTGAGGAAA 3007
||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1277 CGAAATCAATGAAGACTCAGTTCTTATTAGACCTCGGATACAAAGAAAACTCAGAGGAAA 1336
Query 3008 TGGAGAGAGCACTCAAGAATTTCCGTGGCAAAGGATCTGAACTCCGAGAGAGATTTAATG 3067
|||||| |||| | |||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1337 TGGAGACAGCAATGAAGAATTTCCGTGGTAAAGGATCAGAACTCCGAGAGAGATTTAATG 1396
Query 3068 TGCTCGTGAGTTTTGGTTTTACCGAGAAAGATGTCAAAGATATGGTGAAAGCATGTCCTA 3127
| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1397 TCCTCGTAAGTTTGGGTTTTACCAAGAAAGATGTCAAAGATATGGTGAAAGCATGTCCTA 1456
Query 3128 GTATCCTCTCCCAGGCATGTGATATCTTAGAATCAAAGGTTAACTACCTTATAAACGAAT 3187
||| ||||||||| | ||||||||| ||||||||||||| |||||||||||||| ||||
Sbjct 1457 CTATGCTCTCCCAGACCTGTGATATCCTAGAATCAAAGGTGAACTACCTTATAAAGGAAT 1516
Query 3188 TAGGTCATCCGCTTTCGACATTGGTG-ACTTTCCCAACATGTCTTAA-GTACACTCTTCA 3245
||||| ||||||||||||| |||||| | |||||| ||||| |||| || |||||||||
Sbjct 1517 TAGGTTATCCGCTTTCGACTTTGGTGGA-TTTCCCTTCATGT-TTAAAGTTCACTCTTCA 1574
Query 3246 GCGGATGAAGCTTC-GATTTGCAATGTTCTCTTGGCTTCAAGATCGAGGAAAGGCAGACC 3304
|||||||||||| | ||||||||||||||||||||||||||| |||||||| | |||||
Sbjct 1575 GCGGATGAAGCT-CAGATTTGCAATGTTCTCTTGGCTTCAAGCCCGAGGAAAAGTAGACC 1633
Query 3305 -CAAAGCTTGCAGTTAGTACTATACTTG-TGTGCTCTGACAA 3344
||| | | |||||| || || || | | ||||| |||||
Sbjct 1634 GCAA-GATCAAAGTTAGCACAATGCTCGCT-TGCTCGGACAA 1673
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 170968941744
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5