BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg892981

Length=312
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G68300.1 | Symbols:  | Adenine nucleotide alpha hydrolases-l...   198    2e-50


> AT1G68300.1 | Symbols:  | Adenine nucleotide alpha hydrolases-like 
superfamily protein | chr1:25598331-25599357 REVERSE LENGTH=766
Length=766

 Score =  198 bits (107),  Expect = 2e-50
 Identities = 125/134 (93%), Gaps = 0/134 (0%)
 Strand=Plus/Plus

Query  108  GAGTCATAAGAATGCTGGATTGAATCGGCTTGATGAAGGAACCAAAATTTGTGATGAGAT  167
            |||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| 
Sbjct  318  GAGTCATAAGAACGCTGGATTGAATCGTCTTGATGAAGGAACCAAAATTTGTGCTGAGAC  377

Query  168  TGGTGTTACTCCAAGAAAGGTGTTGGAATTTAAAAATCCTAAAGAAGCCATATGTGAAGT  227
            ||| |||||||||||||||||||||||||||  ||||||||||||||| |||||||||| 
Sbjct  378  TGGGGTTACTCCAAGAAAGGTGTTGGAATTTGGAAATCCTAAAGAAGCGATATGTGAAGC  437

Query  228  TGCTGAGAAGCTTG  241
            ||||||||||||||
Sbjct  438  TGCTGAGAAGCTTG  451



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14477111712


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5