BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893036
Length=2880
Score E
Sequences producing significant alignments: (Bits) Value
AT5G11210.1 | Symbols: ATGLR2.5, GLR2.5 | glutamate receptor 2.... 2972 0.0
AT5G11180.1 | Symbols: ATGLR2.6, GLR2.6 | glutamate receptor 2.... 2761 0.0
> AT5G11210.1 | Symbols: ATGLR2.5, GLR2.5 | glutamate receptor
2.5 | chr5:3571214-3574537 REVERSE LENGTH=2490
Length=2490
Score = 2972 bits (1609), Expect = 0.0
Identities = 2134/2383 (90%), Gaps = 53/2383 (2%)
Strand=Plus/Plus
Query 203 ATGGCTTCAAGACAAGGATTGTCCTCAACATCCGAGATTCCAAACGAACTGTTATTGGTG 262
||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||||
Sbjct 1 ATGGCTTCAAGACAAGGATTGTCCTCAACGTCCGAGACTCCAAACAAACTGTTGTTGGTG 60
Query 263 CTGCAGCTTCAGCTTTATACTTGATAAAGAAGAGGGAAGTGGTGGCCATTATTGGACCAG 322
|| || | || | | | |||||||||||||||||||||||||||||||||
Sbjct 61 CT---GC--C-GC--T-T-C-------AGAAGAGGGAAGTGGTGGCCATTATTGGACCAG 103
Query 323 GGAATTCAATGCAAGCTCCATTTTTAATCAACCTCGGAAATCAATCTCAAGTTCCCATAA 382
||| |||||||||||||||||||||||||||||| ||||| |||||| ||||||| || |
Sbjct 104 GGACTTCAATGCAAGCTCCATTTTTAATCAACCTTGGAAACCAATCTAAAGTTCCAATCA 163
Query 383 TTTCATTCTCTGCGACAAGCCCTGTTCTTGATTCTCTCCGTAGTCCATATTTCATCAGAG 442
||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 164 TTTCATTCTCTGCAACAAGCCCTCTTCTTGATTCCCTCCGTAGTCCATATTTCATCAGAG 223
Query 443 CCACACACGACGATTCGTCTCAAGTCCAAGCCATTAGCGCCATCATAGAGTCGTTTAGAT 502
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 224 CCACTCACGACGATTCGTCTCAAGTCCAAGCCATTAGCGCCATCATAGAGTCATTTAGAT 283
Query 503 GGAGAGAAGTTGTGCCTATTTATGTGGACAATGAGTTCGGAGAAGGTATTCTTCCTTACT 562
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||
Sbjct 284 GGAGAGAAGTTGTGCCTATATATGTAGACAATGAGTTCGGAGAAGGTATTCTTCCTAACT 343
Query 563 TAGTTGATGCTTTTCAAGAGATCAACGTTCGTATCCGATACCGAAGTGCCATATCAGCAC 622
|||||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||
Sbjct 344 TAGTTGATGCTTTTCAAGAGATTAATGTTCGTATCCGATACCGAAGTGCCATCTCATTAC 403
Query 623 ATTCCTCTGATGATCAAATCAAGAAAGAGCTTTACAAACTAATGACCATGCCCACTAGGG 682
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 404 ATTACTCTGATGATCAAATCAAGAAAGAGCTTTACAAACTAATGACCATGCCTACTAGGG 463
Query 683 TTTTTGTCGTGCACATGTTGCCTGATCTTGGATCGAGGCT-TTTCTCGATAGCAAAAGAG 741
||||| ||||||||||| |||||||||| || || || || ||| |||||||||||||||
Sbjct 464 TTTTTATCGTGCACATGCTGCCTGATCTCGGGTCAAGACTCTTT-TCGATAGCAAAAGAG 522
Query 742 ATTGGTATGATGAATAAAGGATATGTATGGATTGTCACAAATGGTATAGCTGATCAAC-T 800
|||| |||| ||| ||||||||||||||||| |||||||||||||||||||||| | |
Sbjct 523 ATTGATATGCTGAGCAAAGGATATGTATGGATAGTCACAAATGGTATAGCTGATC-TCAT 581
Query 801 GAGTCTAAAGGGGGAATCAAGCTTGGAGAATATGCATGGTGTCTTGGGCGTCAAGACATA 860
|||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 582 GAGTATAATGGGGGAATCAAGCTTGGTGAATATGCATGGTGTCTTGGGCGTCAAGACATA 641
Query 861 TTTCT-CAAGATCAAAAGAGCTAATGTATCTTGAAACTCGTTGGCGAAAAAGATTCGGAG 919
||| | ||| ||| ||||||||| | |||||||| ||||||||| ||||||||||||||
Sbjct 642 TTT-TGCAAAATCCAAAGAGCTACTACATCTTGAAGCTCGTTGGCAAAAAAGATTCGGAG 700
Query 920 GAGAAGAGATAAACAATTTTGAATGTTGGGCTTATGATGCGGCCACAGCACTTGCAATGT 979
|||||||| | ||||| |||| |||||||||||||||||| |||||||||||||||||||
Sbjct 701 GAGAAGAGCTGAACAACTTTGCATGTTGGGCTTATGATGCTGCCACAGCACTTGCAATGT 760
Query 980 CAATTGAGGAAATCAGTAATGTACACATGAGTTTCAATAAGACCAAAACAA-ACACTTCA 1038
|| |||||||||| || | ||| ||||||||||||| | |||| ||| || ||||||||
Sbjct 761 CAGTTGAGGAAATTAGGCACGTAAACATGAGTTTCAACACGACC-AAAGAAGACACTTCA 819
Query 1039 AGAGAAGATATAGGCACGGACCTTGATGATCTTGGCGTTGCTCTCTCTGGTCCCAAAATT 1098
||||| ||||| || || || |||||||| || ||||||||||| ||||||||||| ||
Sbjct 820 AGAGATGATATTGGGACTGATCTTGATGAACTCGGCGTTGCTCTATCTGGTCCCAAGCTT 879
Query 1099 CTTCAAGCATTGACAACAGTCAGTTTCAAAGGTGTTGCCGGGAGATTTCAGCTAAAAAAC 1158
||| | || ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 CTTGATGCCTTGTCAACAGTCAGTTTCAAAGGTGTTGCCGGGAGATTTCAGCTAAAAAAC 939
Query 1159 GGAAAGCTAGAGGCGAAGACTTTCAAGA-TAGTCAATATAGAGGAAAGCGGGGAAAGAAC 1217
|||||||||||||||| ||||||||||| || ||||||||||||||||||| ||||||||
Sbjct 940 GGAAAGCTAGAGGCGACGACTTTCAAGATTA-TCAATATAGAGGAAAGCGGTGAAAGAAC 998
Query 1218 AGTTGGATTTTGGATATCAAAAGTAGGACTAGTGAAGAGCCTAAGAGTTAATCAAACAGA 1277
||||||||||||| ||||||||||||| |||| |||||| |||||| | ||
Sbjct 999 GGTTGGATTTTGGAAATCAAAAGTAGGATTAGTAAAGAGCTTAAGAG----T-----AG- 1048
Query 1278 CATTAAAATATCACACAGCTCACGCCGCCTTAGACCGATTATATGGCCTGGGGACACTAT 1337
| |||| | || |||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct 1049 -A-TAAAGTGTCTCACAGCTCCCGTCGCCTTAGACCGATAATATGGCCTGGTGACACTAT 1106
Query 1338 TTTTGTGCCTAAAGGTTGGGAATTCCCAACAAACGCAAAGAAGCTGCGAATAGCGGTTCC 1397
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1107 TTTTGTGCCTAAAGGTTGGGAATTCCCAACAAACGCAAAGAAGCTGCGAATAGCAGTTCC 1166
Query 1398 AAAGAAGGATGGTTTCAACAATTTTGTGGAGGTAAAAAAGGATGCAAATACTAATGCTCC 1457
||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||
Sbjct 1167 AAAGAAGGATGGTTTCAACAATTTTGTTGAGGTAACCAAGGATGAAAATACTAATGTTCC 1226
Query 1458 AACGATCACCGGGTTTTGCATAGATGTTTTCGAA-ACGGCAATGAGACAAATGCCATATG 1516
|||| |||||||||||||||||||||||||| || |||| |||||| |||||||||||||
Sbjct 1227 AACGGTCACCGGGTTTTGCATAGATGTTTTC-AACACGGTAATGAGCCAAATGCCATATG 1285
Query 1517 CTGTCCCCTATGAGTACATCCCCTTTGAAACTCCTGATGGAAAATCGCGTGGAAGTTACG 1576
||||| |||||||||||||||||||||| || |||||||||||| | |||||||||||||
Sbjct 1286 CTGTCTCCTATGAGTACATCCCCTTTGATACGCCTGATGGAAAACCTCGTGGAAGTTACG 1345
Query 1577 ACGAAATGATTTATCATGTGTTTCTTGGGGAGTTTGATGGAGCTGTAGGGGATATCA-CA 1635
| |||||| ||||| |||||||||||||||||||||||||||||||||| |||| || ||
Sbjct 1346 ATGAAATGGTTTATAATGTGTTTCTTGGGGAGTTTGATGGAGCTGTAGGTGATA-CAACA 1404
Query 1636 ATCTTAGCTAATCGGTCTTCAT-ACGTCGATTTTGCATTGCCATACTCGGAGACGGGTAT 1694
|| || ||||||||||| ||| | || ||||| || ||||||||||||||||| || ||
Sbjct 1405 ATTTTGGCTAATCGGTCG-CATTATGTTGATTTCGCGTTGCCATACTCGGAGACCGGAAT 1463
Query 1695 TGTAGTGGTTGTGCCGGTCAAGGATGAGAGGGAAAAAGGAAAATGGGTTTTCTTAAAGCC 1754
|||| | |||| || |||||||||| || ||||||||| ||||||| |||||||||||
Sbjct 1464 TGTATTCCTTGTACCAGTCAAGGATGGGAAAGAAAAAGGAGAATGGGTCTTCTTAAAGCC 1523
Query 1755 TTTAACATGGGAGCTATGGGTCCTCACTGCTGCTTCTTTTCTCTACATTGGAATCATGGT 1814
||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1524 TTTAACAAAGGAGCTATGGTTGGTCACTGCTGCTTCTTTTCTCTACATTGGAATCATGGT 1583
Query 1815 TTGGATTTTTGAGTACCAAGCAAATGAGGAGTTCAGGGGACAGA-GCATTATTAATAAAA 1873
|||||||||||||||||||||| ||||||||||||||| ||||| | || ||| ||||||
Sbjct 1584 TTGGATTTTTGAGTACCAAGCAGATGAGGAGTTCAGGGAACAGATG-ATAATTGATAAAA 1642
Query 1874 TATCTAATGTGTTCTACTTCTCATTTTCGACTCTCTTTTTCGCACACATGAGGCCATCAG 1933
|||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 1643 TATCTAGTGTGTTCTACTTCTCGTTTTCGACTCTCTTTTTCGCACACAGGAGGCCATCAG 1702
Query 1934 AGAGCATTTTCACAAGAGTTCTTGTGGTGGTTTGGTGCTTTGTGTTGCTTATTCTTACTC 1993
||||| |||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct 1703 AGAGCTTTTTTACAAGGGTTCTTGTTGTGGTTTGGTGCTTTGTGTTGCTAATTCTGACTC 1762
Query 1994 AGAGCTACACAGCAACATTGACATCGATGCTGACGGTTCAAGAACTTAGACCAACAGTGA 2053
||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||
Sbjct 1763 AGAGCTACACAGCAACACTGACATCGATGCTGACAGTTCAAGAGCTTCGACCAACAGTGA 1822
Query 2054 GACACATGGACGATCTGAGGAAGAGCGGAGTTAACATCGGATACCAAAGTGGTTCGTTTA 2113
|||||||||| ||| |||||||||||||||| ||||| ||||| |||| |||||||||||
Sbjct 1823 GACACATGGATGATTTGAGGAAGAGCGGAGTGAACATTGGATATCAAACTGGTTCGTTTA 1882
Query 2114 CATTCGAAAGGCTGAAACAAATGGGTTACAAAGAATCGAGGTTAAAGACTTATGATACTC 2173
||||||||||||||||||||||| ||| | | ||||||||||||||||| ||| || |||
Sbjct 1883 CATTCGAAAGGCTGAAACAAATGCGTTTCGATGAATCGAGGTTAAAGACATATAATTCTC 1942
Query 2174 CTCAGGAAATGCATGAACTTTTTCTTAAAAAGAGCAGCAATGGTGGTATTGATGCTGCAT 2233
|| | || |||| ||||||||||||| | |||||||||||||| || ||||||||||| |
Sbjct 1943 CTGAAGAGATGCGTGAACTTTTTCTTCACAAGAGCAGCAATGGCGGGATTGATGCTGCGT 2002
Query 2234 TCGATGAAGTCCCTTATGTCAAGCTTTTCATGGCTAAATATTGCTCAAAATATTCCATTA 2293
||||||| ||| ||||| ||||||||||||||||||| ||||||||| | |||||||| |
Sbjct 2003 TCGATGAGGTCGCTTATATCAAGCTTTTCATGGCTAAGTATTGCTCAGAGTATTCCATCA 2062
Query 2294 TCGAGCCTACCTTTAAGGCTGATGGCTTTGGCTTTGCCTTTCCATTGGGATCTCCTTTGG 2353
||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||
Sbjct 2063 TCGAGCCTACCTTTAAGGCTGATGGCTTTGGCTTTGCATTTCCACTAGGATCTCCATTGG 2122
Query 2354 TGCCAGATATTTCAAGACAGATCTTGAATATAACAGAGGGAGA-GACCATGAAAGCTATA 2412
|| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||
Sbjct 2123 TGTCAGATATTTCAAGACAGATCTTGAACATAACAGAGGGAGATG-CCATGAAAGCTATA 2181
Query 2413 GAGAATAAGTGGCTCCTTGGAGAAAAACATTGTCTAGACTCAACCACATCGGATTCTCCA 2472
||||| |||||| |||||||||||||||||||||| ||||| || ||||| |||||||||
Sbjct 2182 GAGAACAAGTGGTTCCTTGGAGAAAAACATTGTCTGGACTCGACTACATCAGATTCTCCA 2241
Query 2473 ATCCGGCTCGATCACCACAGCTTTGAAGCTCTATTTAC-GATCGTCTTTGTTGTTTCTAT 2531
|||| |||||| |||||||||||||||||||||||| | ||||||||||||||||||| |
Sbjct 2242 ATCCAGCTCGACCACCACAGCTTTGAAGCTCTATTT-CTGATCGTCTTTGTTGTTTCTGT 2300
Query 2532 GCTTCTACTCTTAGC-CATGTTGGTTTATAGAAGATACCAAGA 2573
| ||||||||||| | |||||||| || |||| ||||||||||
Sbjct 2301 GATTCTACTCTTA-CTCATGTTGGCTTCTAGAGGATACCAAGA 2342
> AT5G11180.1 | Symbols: ATGLR2.6, GLR2.6 | glutamate receptor
2.6 | chr5:3557261-3561575 REVERSE LENGTH=2721
Length=2721
Score = 2761 bits (1495), Expect = 0.0
Identities = 1712/1818 (94%), Gaps = 9/1818 (0%)
Strand=Plus/Plus
Query 1 ATGTCGTTATTCCATCATCTTTTATCTCGTTCTCTTCCTTTATGGCATGTATTTTTTCTC 60
||||| |||||| |||||||| |||||||| ||||||||||||||| | |||||||| ||
Sbjct 1 ATGTCTTTATTCAATCATCTTCTATCTCGTGCTCTTCCTTTATGGCTTTTATTTTTTATC 60
Query 61 ACCTTCTTAGTATTACTCGGGAAATCTCAAAAGGAAGTTTTACAAGTTAAAGTGGGAATT 120
| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 61 AACTTCTTAGTATTACTCGGGAAATCTCAACAGGAAGTTTTACAAGTTCAAGTGGGAATT 120
Query 121 GTTCTTGATACTAATGTGACATTAGCAGATTTGAGCTTACGAGCTATCAACATGTCTCTC 180
|||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 121 GTTCTTGACACTAATGCGACATTAGCAGCTTTGAGCTTACGAGCTATCAACATGTCTCTC 180
Query 181 TCGGAATTCTATAGCACTCATAATGGCTTCAAGACAAGGATTGTCCTCAACATCCGAGAT 240
|| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 181 TCTGAATTCTATAACACTCATAATGGCTTCAAGACGAGGATTGTCCTCAACATCCGAGAT 240
Query 241 TCCAAACGAACTGTTATTGGTGCTGCAGCTTCAGCTTTATACTTGATAAAGAAGAGGGAA 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TCCAAACGAACTGTTGTTGGTGCTGCAGCTTCAGCTTTATACTTGATAAAGAAGAGGGAA 300
Query 301 GTGGTGGCCATTATTGGACCAGGGAATTCAATGCAAGCTCCATTTTTAATCAACCTCGGA 360
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 301 GTGGTGGCCATTATAGGACCAGGGAATTCAATGCAAGCACCATTTTTAATCAACCTCGGA 360
Query 361 AATCAATCTCAAGTTCCCATAATTTCATTCTCTGCGACAAGCCCTGTTCTTGATTCTCTC 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 361 AATCAATCTCAAGTTCCCATAATTTCATTCTCTGCGTCAAGCCCTGTTCTTGATTCTCTC 420
Query 421 CGTAGTCCATATTTCATCAGAGCCACACACGACGATTCGTCTCAAGTCCAAGCCATTAGC 480
||||||||||||||||||||||| |||||||| || || |||||||| || |||||||||
Sbjct 421 CGTAGTCCATATTTCATCAGAGCTACACACGATGACTCATCTCAAGTGCACGCCATTAGC 480
Query 481 GCCATCATAGAGTCGTTTAGATGGAGAGAAGTTGTGCCTATTTATGTGGACAATGAGTTC 540
|||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 481 GCCATCATAGAGTCATTTAGATGGAGGGAAGTTGTGCCTATTTATGCAGACAATGAGTTC 540
Query 541 GGAGAAGGTATTCTTCCTTACTTAGTTGATGCTTTTCAAGAGATCAACGTTCGTATCCGA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GGAGAAGGTATTCTTCCTTACTTAGTTGATGCTTTTCAAGAGATCAACGTTCGTATCCGA 600
Query 601 TACCGAAGTGCCATATCAG-CACATTCCTCTGATGATCAAATCAAGAAAGAGCTTTACAA 659
||||||||||||||||||| | |||||| ||||||| | | |||||||||||||||||||
Sbjct 601 TACCGAAGTGCCATATCAGTC-CATTCCACTGATGACCTAGTCAAGAAAGAGCTTTACAA 659
Query 660 ACTAATGACCATGCCCACTAGGGTTTTTGTCGTGCACATGTTGCCTGATCTTGGATCGAG 719
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 660 ACTAATGACCATGCCCACTAGGGTTTTTATCGTGCACATGTTGCCTGATCTCGGATCGAG 719
Query 720 GCTTTTCTCGATAGCAAAAGAGATTGGTATGATGAATAAAGGATATGTATGGATTGTCAC 779
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 720 GCTTTTCTCGATAGCAAAAGAGATTGGTATGATGACTAAAGGATATGTATGGATTGTCAC 779
Query 780 AAATGGTATAGCTGATCAACTGAGTCTAAAGGGGGAATCAAGCTTGGAGAATATGCATGG 839
||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||
Sbjct 780 AAATGGTATAGCTGATCAAATGAGTGTAATGGGGGAATCAAGCTTGGAGAATATGCATGG 839
Query 840 TGTCTTGGGCGTCAAGACATATTTCTCAAGATCAAAAGAGCTAATGTATCTTGAAACTCG 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 TGTCTTGGGCGTCAAGACATATTTCTCAAGATCAAAAGAGCTAATGTATCTTGAAACTCG 899
Query 900 TTGGCGAAAAAGATTCGGAGGAGAAGAGATAAACAATTTTGAATGTTGGGCTTATGATGC 959
|||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
Sbjct 900 TTGGCGAAAAAGATTCGGAGGAGAAGAGCTAAACAATTTTGAATGTTGGGGTTATGATAC 959
Query 960 GGCCACAGCACTTGCAATGTCAATTGAGGAAATCAGTAAT---GTACACATGAGTTTCAA 1016
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct 960 GGCCACAGCACTTGCAATGTCAATTGAGGAAATCAGTAGTAACGTAAACATGAGTTTCAG 1019
Query 1017 TAAGACCAAAACAAACACTTCAAGAGAAGATA-TAGGCACGGACCTTGATGATCTTGGCG 1075
| ||||||||| ||||||||||||||| |||| | || || || ||||||||||| ||
Sbjct 1020 TCAGACCAAAAGAAACACTTCAAGAGATGATACTGGG-ACAGATCTTGATGATCTCAGCT 1078
Query 1076 TTGCTCTCTCTGGTCCCAAAATTCTTCAAGCATTGACAACAGTCAGTTTCAAAGGTGTTG 1135
||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| ||||
Sbjct 1079 TTGCTCTCTCTGGTCCCAAGCTTCTTCAAGCGTTGGCAACAGTCAGTTTCAAAGGCGTTG 1138
Query 1136 CCGGGAGATTTCAGCTAAAAAACGGAAAGCTAGAGGCGAAGACTTTCAAGATAGTCAATA 1195
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1139 CCGGAAGATTTCAGCTAAAAAACGGAAAGCTAGAGGCGACGACTTTCAAGATAGTCAATA 1198
Query 1196 TAGAGGAAAGCGGGGAAAGAACAGTTGGATTTTGGATATCAAAAGTAGGACTAGTGAAGA 1255
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1199 TAGAGGAAAGTGGGGAAAGAACAGTTGGATTTTGGAAATCAAAAGTAGGACTAGTGAAGA 1258
Query 1256 GCCTAAGAGTTAATCAAACAGACATTAAAATATCACACAGCTCACGCCGCCTTAGACCGA 1315
|| ||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||||
Sbjct 1259 GCTTAAGAGTGAATCAAACAGGCATTAAAATATCACACAGCTCGCACCGCCTTAGACCGA 1318
Query 1316 TTATATGGCCTGGGGACACTATTTTTGTGCCTAAAGGTTGGGAATTCCCAACAAACGCAA 1375
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 TAATATGGCCAGGGGACACTATTTTTGTGCCTAAAGGTTGGGAATTCCCAACAAACGCAA 1378
Query 1376 AGAAGCTGCGAATAGCGGTTCCAAAGAAGGATGGTTTCAACAATTTTGTGGAGGTAA-AA 1434
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 1379 AGAAGCTGCGAATAGCAGTTCCAAAGAAGGATGGTTTCAATAATTTTGTGGAGGTAACAA 1438
Query 1435 AAGGATGCAAATACTAATGCTCCAACGATCACCGGGTTTTGCATAGATGTTTTCGAAACG 1494
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1439 AAG-ATGCAAATACTAATGCTCCAACGATCACCGGGTTTTGCATAGATGTTTTCGACACG 1497
Query 1495 GCAATGAGACAAATGCCATATGCTGTCCCCTATGAGTACATCCCCTTTGAAACTCCTGAT 1554
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1498 GCAATGAGACAAATGCCTTATGCTGTCCCCTATGAGTACATACCCTTTGAAACTCCTGAT 1557
Query 1555 GGAAAATCGCGTGGAAGTTACGACGAAATGATTTATCATGTGTTTCTTGGGGAGTTTGAT 1614
|||||| | ||||||||||| ||||||||| |||||||||| ||||||||||||||||||
Sbjct 1558 GGAAAACCCCGTGGAAGTTATGACGAAATGGTTTATCATGTATTTCTTGGGGAGTTTGAT 1617
Query 1615 GGAGCTGTAGGGGATATCACAATCTTAGCTAATCGGTCTTCATACGTCGATTTTGCATTG 1674
||||| |||||||||| |||||||||||||||||||||| ||||||| ||||| || |||
Sbjct 1618 GGAGCAGTAGGGGATACCACAATCTTAGCTAATCGGTCTACATACGTAGATTTCGCGTTG 1677
Query 1675 CCATACTCGGAGACGGGTATTGTAGTGGTTGTGCCGGTCAAGGATGAGAGGGAAAAAGGA 1734
|||||||||||||||||||||||||| || || || ||||||||||||||||||||||||
Sbjct 1678 CCATACTCGGAGACGGGTATTGTAGTCGTGGTACCCGTCAAGGATGAGAGGGAAAAAGGA 1737
Query 1735 AAATGGGTTTTCTTAAAGCCTTTAACATGGGAGCTATGGGTCCTCACTGCTGCTTCTTTT 1794
|||||||| |||||||||||||||||| ||||||| ||| |||||||||| |||||||||
Sbjct 1738 AAATGGGTCTTCTTAAAGCCTTTAACAAGGGAGCTCTGGTTCCTCACTGCAGCTTCTTTT 1797
Query 1795 CTCTACATTGGAATCATG 1812
||||||||||| ||||||
Sbjct 1798 CTCTACATTGGGATCATG 1815
Score = 998 bits (540), Expect = 0.0
Identities = 633/676 (94%), Gaps = 14/676 (2%)
Strand=Plus/Plus
Query 1992 TCA-GAGCTACACAGCAACATTGACATCGATGCTGACGGTTCAAGAACTTAGACCAACAG 2050
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1811 TCATGAGCTACACAGCAACATTGACATCGATGCTGACGGTTCAAGAACTTCGACCAACAG 1870
Query 2051 TGAGACACATGGACGATCTGAGGAAGAGCGGAGTTAACATCGGATACCAAAGTGGTTCGT 2110
||||||||||||| ||||||||||| || ||||||||||| ||||| |||| |||||| |
Sbjct 1871 TGAGACACATGGATGATCTGAGGAACAGTGGAGTTAACATTGGATATCAAACTGGTTCCT 1930
Query 2111 TTACATTCGAAAGGCTGAAACAAATGGGTTACAAAGAATCGAGGTTAAAGACTTATGATA 2170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1931 TTACATTCGAAAGGCTGAAACAAATGGGTTACAAAGAATCGAGGTTAAAGACTTATGATA 1990
Query 2171 CTCCTCAGGAAATGCATGAACTTTTTCTTAAAAAGAGCAGCAATGGTGGTATTGATGCTG 2230
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1991 CTCCTCAGGAAATGCATGAGCTTTTTCTTAAAAAGAGCAGCAATGGTGGTATTGATGCTG 2050
Query 2231 CATTCGATGAAGTCCCTTATGTCAAGCTTTTCATGGCTAAATATTGCTCAAAATATTCCA 2290
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2051 CATTCGACGAAGTCGCTTATGTCAAGCTTTTCATGGCTAAATATTGCTCAAAATATACCA 2110
Query 2291 TTATCGAGCCTACCTTTAAGGCTGATGGCTTTGGCTTTGCCTTTCCATTGGGATCTCCTT 2350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2111 TTATCGAGCCTACCTTTAAGGCTGATGGCTTTGGCTTTGCCTTTCCATTGGGATCTCCTT 2170
Query 2351 TGGTGCCAGATATTTCAAGACAGATCTTGAATATAACAGAGGGAGAGACCATGAAAGCTA 2410
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2171 TGGTGCCAGATCTTTCAAGACAGATCTTGAATATAACGGAGGGAGAGACCATGAAAGCTA 2230
Query 2411 TAGAGAATAAGTGGCTCCTTGGAGAAAAACATTGTCTAGACTCAACCACATCGGATTCTC 2470
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2231 TAGAGAATAAGTGGCTCCTCGGAGAAAAACATTGTCTTGACTCAACCACATCGGATTCTC 2290
Query 2471 CAATCCGGCTCGATCACCACAGCTTTGAAGCTCTATTTACGATCGTCTTTGTTGTTTCTA 2530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2291 CAATCCGGCTCGATCACCACAGCTTTGAAGCTCTATTTACGATCGTCTTTGTTGTTTCTA 2350
Query 2531 TGCTTCTACTCTTAGCCATGTTGGTTTATAGAAGATACC---AAGAAAT-AGAAGGCGGC 2586
||||||||||||||||||||||||||| ||||||||||| |||||| | ||| ||||
Sbjct 2351 TGCTTCTACTCTTAGCCATGTTGGTTTGTAGAAGATACCGCCAAGAAAGCAAAAG-CGGC 2409
Query 2587 GAAACCAACGCTCCACCTAGTCCGCCAAGAGATGATAACATGAGAGCTCCAGCAGCTAGT 2646
|| | ||| ||| | || | |||||| ||||| |||||||||||||||| | ||| |
Sbjct 2410 GAGATCAATGCTA-A--TAATTCGCCAACAGATGGTAACATGAGAGCTCCA-C--CTAAT 2463
Query 2647 CCGCCAA-ATGATGAT 2661
| ||||| | ||||||
Sbjct 2464 CAGCCAACA-GATGAT 2478
Score = 340 bits (184), Expect = 3e-92
Identities = 254/285 (89%), Gaps = 15/285 (5%)
Strand=Plus/Plus
Query 2596 GCTCCACCTAGTCCGCCAAGAGATGATAACATGAGAGCTCCAGCAGCTAGTCCGCCAAAT 2655
|||||||||| || ||||| ||||||||||||||||||||| | | |||||||||||| |
Sbjct 2452 GCTCCACCTAATCAGCCAACAGATGATAACATGAGAGCTCC-G-A-CTAGTCCGCCAATT 2508
Query 2656 GATGATCAAGTCCATGAGCCACCTGGTCCTGCATTACATGAAGCCGATGCACCAGACGCT 2715
||||||||||||| ||||||||||||||| |||||| ||||||||||| || |
Sbjct 2509 GATGATCAAGTCCTTGAGCCACCTGGTCCAGCATTAAATGAAGCCGAT------GA---T 2559
Query 2716 CAAGATCAGCTTCTGAATGATGAAGTTAATGTTGGAGATAGAAATGAAGTAGACATTATT 2775
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 2560 CAAGATCAGCTTCTGAATGATGAAGTTAATGTTGGAGATCGAAATGAAGTAGATATTATT 2619
Query 2776 GTGGAAGTCGACCCAACTTTGATTCACCGTCGAAATCTGATCACCTCAAAGACTATACCC 2835
||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||
Sbjct 2620 GTGGAAGTCGACCCAACTTTGGTTCACCGTAGAAATCTGATCACCTCAAAAACAATACCC 2679
Query 2836 ATCCGAAGAGCTGTGCCATTATTCTCGAGGATTAAGTCCGCATAG 2880
| ||||||||||| | | ||||||||||||||||||| ||||||
Sbjct 2680 ACCCGAAGAGCTG--C-ACTATTCTCGAGGATTAAGTCTGCATAG 2721
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143126288379
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5