BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893040
Length=2970
Score E
Sequences producing significant alignments: (Bits) Value
AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 2045 0.0
AT3G04210.1 | Symbols: | Disease resistance protein (TIR-NBS c... 579 7e-164
AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-L... 385 2e-105
AT2G14080.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 305 1e-81
> AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) | chr5:3587978-3591960 REVERSE LENGTH=3570
Length=3570
Score = 2045 bits (1107), Expect = 0.0
Identities = 1716/2007 (86%), Gaps = 54/2007 (3%)
Strand=Plus/Plus
Query 1 ATGGAGTTTCAAAGAATGGGAATCACTCCATTCATTGATAATGAGATCAAAAGAGGGGAA 60
||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||
Sbjct 247 ATGGAGTTTCAAAGAATGGGAATCACTCCATTCGTTGATAATGAGATTAAAAGAGGAGAA 306
Query 61 TCCATCGGTCCTGAGC-TCATTCGTGCCATTAGAGAATCTAGGATCTCAGTTATTTTGCT 119
|||||||||||||||| || | || || ||||||| |||| ||| || |||| |||||
Sbjct 307 TCCATCGGTCCTGAGCTTC-TGCGGGCTATTAGAGGGTCTAAGATAGCAATTATCTTGCT 365
Query 120 CTCTAAGAATTACGCTTCTTCAAAGTGGTGTCTTGACGAACTGGTGGAGATTATGAAGTG 179
||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 366 CTCTAGGAACTATGCTTCTTCAAAATGGTGTCTTGACGAACTGGTGGAGATTATGAAATG 425
Query 180 CAGAGAAGAGT-TGGGTCAAACTGTAG-TGGCCAT-TTTCTATAAAGTAGATCCATCTGA 236
||||||||||| | ||||||||||| | ||||||| ||| || ||||| ||||| |||||
Sbjct 426 CAGAGAAGAGTAT-GGTCAAACTGT-GATGGCCATATTT-TACAAAGTGGATCCTTCTGA 482
Query 237 CGTAAAGAAGCTGATCGGAAATTTTGGGCAAGTATTTAGAAAAACGTGTGCTGGTAAAAC 296
||||| || |||| |||| |||| ||| |||| ||||||||||| ||||| |||||| |
Sbjct 483 TGTAAAAAATCTGACCGGAGATTTCGGGAAAGTCTTTAGAAAAACTTGTGCCGGTAAACC 542
Query 297 AAAGGAA-GACATTGGAAGATGGAGACAAGCTCT-GGCAAAAGTGGCTACAATCGCTGGT 354
||| ||| |||||||| ||||||||||||||| | || ||||||||| ||| | ||||||
Sbjct 543 AAA-GAAGGACATTGGGAGATGGAGACAAGCT-TGGGAAAAAGTGGCCACAGTAGCTGGT 600
Query 355 TATCATTCAAGCAACTGGGATAATGAAGCGGCCATGATCAAGAAAATCGTAACTGATATT 414
|| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 601 TACCATTCAATCAACTGGGATAATGAAGCGGCCATGATCAAGAAAATCGCCACTGATATT 660
Query 415 TCAAACATGTTGAATAATTCCATAT-CATCAAGTGATTTCGATGGGTTAGTTGGTATGAG 473
|| ||||| |||| |||||||| | | ||| |||||||||| ||||||||||| |||||
Sbjct 661 TCGAACATATTGATTAATTCCA-CTCCTTCACGTGATTTCGACGGGTTAGTTGGGATGAG 719
Query 474 AGCTCATTTCGAAAAGATGGAACCATTGTTATGCCTAGAGTCAGATGAAGTGAGGATGAT 533
||||||||| ||||||||| |||| |||||||||||||| |||| ||||| ||||| ||
Sbjct 720 AGCTCATTTAGAAAAGATGAAACCGTTGTTATGCCTAGACACAGACGAAGTAAGGATAAT 779
Query 534 TGGGATTTGGGGTCCTCCTGGGATTGGGAAGACCACAATTGCCAGAGTTGTATACAACCA 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 TGGGATTTGGGGTCCTCCTGGGATTGGGAAGACCACAATTGCCAGAGTTGTATACAACCA 839
Query 594 ATTCTCCAACAGTTTTCAATTGGGTGTCTTTCTGGACAATATCAAAGCAAACTATACAAG 653
| ||||| ||||||| ||| || |||||||| |||| |||||||||||||||||||| ||
Sbjct 840 ACTCTCCCACAGTTTCCAACTGAGTGTCTTTATGGAGAATATCAAAGCAAACTATACCAG 899
Query 654 ACCT--TGT-TCCGATGACTACAGCT-CAAAGTTACAATTGCAA-AAACACTTTATGTCT 708
||| || |||||||||||||| | ||||||| ||||| ||| ||| |||||||||
Sbjct 900 ACCAACTGGCTCCGATGACTACAG-TGCAAAGTTGCAATTACAACAAATG-TTTATGTCT 957
Query 709 CAAATAATCAACCATAAGGATATGGAGATTTTTCATTTAGGAGTTGCCCAAGATAGGTTG 768
||||||| ||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 958 CAAATAACCAAGCAAAAGGATATAGAGATTCCTCATTTAGGAGTTGCCCAAGATAGGTTG 1017
Query 769 AAAGACAAGAAAGTTCTTGTCGTTCTTGATGGCGTGGACAAGTCAGTACAACTAGATGCG 828
||||||||||||||||| |||||||||||||| ||| || ||||||||||||||||||||
Sbjct 1018 AAAGACAAGAAAGTTCTGGTCGTTCTTGATGGGGTGAACCAGTCAGTACAACTAGATGCG 1077
Query 829 ATGGTGAAAGAAACTTGTTGGTTTGGTCCTGGGAGTCGAATTATCGTGACAACACAAGAT 888
|||| ||||||| |||| ||||||||||||||||||||||| ||| | ||||||||||||
Sbjct 1078 ATGGCGAAAGAAGCTTGGTGGTTTGGTCCTGGGAGTCGAATCATCATTACAACACAAGAT 1137
Query 889 CATAGGCTTTTTAGAGCACATGGGATTAACCACATTTACAAGGTGGATTTTCCACCAGCT 948
|| | |||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 1138 CAGAAACTTTTTAGAGCACATGGGATTAACCATATTTACAAGGTGGATTTTCCACCAACT 1197
Query 949 GATGAGGCTCTTCAAATCTTCTGCATGTATGCTTTTGGTCAGAAGTCCCCTAAAGATGGT 1008
|| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1198 GAAGAGGCTCTTCAAATCTTCTGCATGTATGCTTTTGGTCAAAATTCCCCTAAAGATGGT 1257
Query 1009 TTTGAGGAGCTTGCTTGGGAAGTTACAACAT-TTGCGGGTAAACTTCCTTTGGGGCTAAG 1067
||| || | ||||||||| |||| | || || |||| ||||| || ||||||||||||||
Sbjct 1258 TTTCAGAACCTTGCTTGGAAAGTAATAA-ATCTTGCCGGTAACCTCCCTTTGGGGCTAAG 1316
Query 1068 GGTTCTGGGCTCCCATTTCCGGGGAATGTCGA-AGCAGGAGTGGATAAAGTCACTACCAA 1126
|| |||||||| |||| |||||||||||| || || |||||| ||||||| ||||||
Sbjct 1317 AATTATGGGCTCCTATTTTAGGGGAATGTCGAGAGAAG-AGTGGAAAAAGTCATTACCAA 1375
Query 1127 GGTTAAAAACTAGTCTTGACACTGATATTCAAAGCATTTTGAAATTCAGCTATGACGCTT 1186
| ||| | | ||| |||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 1376 GATTAGAGAGTAGCCTTGACGCTGATATTCAAAGCATTTTGAAGTTCAGCTATGACGCTT 1435
Query 1187 TGGATGATGAAGATAAAGATTTATTTCTTCATATTGCCTGCTTTTTCAACTATGGAGTGA 1246
| ||||| ||||||||| |||||||||||||||| || || ||||||||| | || ||
Sbjct 1436 TAGATGACGAAGATAAAAATTTATTTCTTCATATAGCATGTTTTTTCAACGGTAAAGAGA 1495
Query 1247 TTGAGAAAGTGGAAGAGCATCTTGCGAGGAAGTTCT-TGGAAGTGAGGCAAAGACTTAAC 1305
|| ||| | |||||||||||||||| | |||||| | ||||||| |||||||||||||||
Sbjct 1496 TTAAGATATTGGAAGAGCATCTTGCAAAGAAGTT-TGTGGAAGTCAGGCAAAGACTTAAC 1554
Query 1306 GTCTTATCTCAGAAATCTCTCATACTCTTCAACCAAT-GTGGA-CGTATTGAGATGCATA 1363
|||||| || |||||||||||||| |||| | |||| | ||| | ||| ||||||||||
Sbjct 1555 GTCTTAGCTGAGAAATCTCTCATA-TCTTTTAGCAATTGGGGAAC-TATAGAGATGCATA 1612
Query 1364 GTTTGCTAGAAAAACTAGGTAGAGAAATTGTTCGTAAGCTATCTATTCATGACCCTGGAC 1423
|||||| |||||||||| |||||||||||||||| | |||||| ||||| |||||||
Sbjct 1613 AACTGCTAGCAAAACTAGGTGGAGAAATTGTTCGTAACCAATCTATCCATGAGCCTGGAC 1672
Query 1424 AGCGCCAGTTTTTGGTCGATGAAAGA-GAGATCTGTGAAGTACTGATTAGTGATGCAGCA 1482
| |||||||||||| | |||| | || ||||| ||||| || |||| | |||||||||||
Sbjct 1673 AACGCCAGTTTTTGTTTGATGGA-GAAGAGATATGTGATGTGCTGAATGGTGATGCAGCA 1731
Query 1483 GGTAGTAAAAGTATTATAGGTATAGATCTCAACTACAGGGGAATTGGGGAAGAATTAAAT 1542
|||||||||||| | ||||| |||||| || |||||| ||| | ||||||||| ||
Sbjct 1732 GGTAGTAAAAGTGTAATAGGCATAGATTTCCACTACAT---AATCGAGGAAGAATTCGAT 1788
Query 1543 AT-AAGTGAGAGAGCCTTTGAAGGAATGTGTAATCTCCAGTTCTTAAGAATCGATGGTGA 1601
|| || |||||||| ||||||||||||| |||||| |||||||||||| ||||| ||||
Sbjct 1789 ATGAA-TGAGAGAGTTTTTGAAGGAATGTCTAATCTTCAGTTCTTAAGATTCGATTGTGA 1847
Query 1602 T--TGCAATACATTGCAGTTATCGCAAGGTCTGAACTATTTTTCTCGCAAACTTCGAAT- 1658
|| | ||||||||| ||||| | ||||||| |||| ||||||| ||||||| | |
Sbjct 1848 CCATG-A-TACATTGCAATTATCCCGCGGTCTGAGCTATCTTTCTCGTAAACTTC-AGTT 1904
Query 1659 ACTACACTGGAGT-TATTTCCCGATGGCATGTTTGCCTTCTAATGTGAACTTGGAGTTTC 1717
|||| | |||| | ||||| |||||| ||||||||||||||| ||||||| ||||||| |
Sbjct 1905 ACTAGATTGGA-TATATTTTCCGATGACATGTTTGCCTTCTACTGTGAACGTGGAGTTCC 1963
Query 1718 TTGTCGAACTAATCATGGATA-ACAGTAAGCTTGAGAAGTTGTGGGAGGGAATTAAACCG 1776
|| | ||||||| | || | |||| |||||||| | ||||||||| ||| ||||||||
Sbjct 1964 TTATTGAACTAAACCTG-ACGCACAGCAAGCTTGATATGTTGTGGGAAGGAGTTAAACCG 2022
Query 1777 CTTCGTAATCTCAAG-AGGATGGATATGCGTGATTCTGCAAACTTGAAGGAGCTTCCTGA 1835
|||| |||||||| | || |||||| || || |||||| |||||||||||||||||||||
Sbjct 2023 CTTCATAATCTCAGGCAG-ATGGATTTGAGTTATTCTGTAAACTTGAAGGAGCTTCCTGA 2081
Query 1836 TTTCTCAACTGCCACTAATCTTCAGAA-GTTGAATCTAAGTTATTGCTCAAGTCTAATCA 1894
| |||||||||||| |||||| | ||| ||||| ||| | ||||||| ||||| ||||
Sbjct 2082 TCTCTCAACTGCCATTAATCTCC-GAAAGTTGATTCTTTCTAATTGCTCCAGTCTGATCA 2140
Query 1895 AGCTCCCCTCTTCTATTGGGAATGCCA-CTAATCTCAAGAAATTAAATCTCCGTAGATGC 1953
| ||||| |||| |||||||||||||| | |||||| || | ||| |||| | |||||
Sbjct 2141 AACTCCCTTCTTGTATTGGGAATGCCATC-AATCTCGAGGATTTAGATCTTAATGGATGC 2199
Query 1954 TCAAATATTATGGAGTTTCCTTCTTTT 1980
|||| | || ||||| |||| ||||||
Sbjct 2200 TCAAGTCTTGTGGAGCTTCCCTCTTTT 2226
Score = 640 bits (346), Expect = 0.0
Identities = 862/1100 (78%), Gaps = 80/1100 (7%)
Strand=Plus/Plus
Query 1895 AGCTCCCCTCTTCTATTGGGAATGCCACTAATCT-CAAGAAATTAAATCTCCGTA-GA-T 1951
||||||| ||||||||||||||||||| |||||| ||| || | ||| | | || |
Sbjct 2498 AGCTCCCGTCTTCTATTGGGAATGCCATTAATCTCCAA-AACCTGCTTCT-TG-ACGATT 2554
Query 1952 GCTCAAATAT-TATGGAGTTTCCTTCTTTTATTGAAAAAGCCACCAATCTAGAGATA-TT 2009
|||||| | | | ||||| | || || | ||||| || ||||| ||| ||| | || |
Sbjct 2555 GCTCAAGTCTGT-TGGAGCTCCCCTCGTCTATTGGGAATGCCACTAATTTAGTG-TACAT 2612
Query 2010 GGATCTTAGTAGTTGCTCAAATTTGGTTGAACTTCCTCTTTTTATTA-AAAACCTTCAGA 2068
| | ||||||| |||||||||| |||| || |||||||||| || || |||||||||||
Sbjct 2613 GAACCTTAGTAATTGCTCAAATCTGGTGGAGCTTCCTCTTTCTA-TAGGAAACCTTCAGA 2671
Query 2069 AGTTGCA-GAAGTTGAGATTAGGAGGATGTTCTAAGCTACAGGTTCTTCCAACCAACATC 2127
||||||| ||| |||| ||| |||||| ||||||||| ||| |||||| | |||||||
Sbjct 2672 AGTTGCAGGAA-TTGATTTTAAAAGGATGCTCTAAGCTAGAGGATCTTCCCATCAACATC 2730
Query 2128 AACTTGGAATCTTTGGTTGA-ACTTGACCTCACTGATTGCTCGGCA--TTGAAATTGTTT 2184
|||||||||||||||| | ||||| |||| ||||||||| || |||||| ||||
Sbjct 2731 AACTTGGAATCTTTGG-ACATACTTGTGCTCAATGATTGCTC--CATGTTGAAAAGGTTT 2787
Query 2185 CCCGAGATTTCTACAAACGTTAGAGTTCTCAAGCTCAG-CGAGACTGCAATAGAAGAAGT 2243
|| ||||| ||||| |||||||||| |||| | ||| | || || ||||||||||||||
Sbjct 2788 CCTGAGATCTCTACTAACGTTAGAGCTCTCTATCTCTGTGGA-ACCGCAATAGAAGAAGT 2846
Query 2244 GCCTCCCTCGATCGCGTTC-TGGCCTCGTCTTGATGAGTTGCAT-ATGTCTTACTTTGAA 2301
||||| ||||||| | || ||||| ||||||||||| |||| | ||||| ||||||||
Sbjct 2847 GCCTCTCTCGATC-AGGTCATGGCCCCGTCTTGATGAATTGC-TGATGTCATACTTTGAT 2904
Query 2302 AACCTCA-AGGAACTCCCTCATGCTCTTTG-CAGCATCACAGATCTGTACTTGAGCGATA 2359
|| || | |||| ||||||||| || ||| || ||||||| ||||| ||||||||| ||
Sbjct 2905 AATCT-AGTGGAATTCCCTCATGTTC-TTGACATCATCACAAATCTGGACTTGAGCGGTA 2962
Query 2360 CAGAAATACAGGAGGTTCCTTCATTGGTCAAGAGAATCTCTCGTC-T-GGATCGA-TTAG 2416
||||||||| ||||||||| || || |||||||||| ||||||| | || | | | |
Sbjct 2963 AAGAAATACAAGAGGTTCCTCCACTGATCAAGAGAATATCTCGTCTTCAGA-C-ACTCA- 3019
Query 2417 TGCTCAAGGGATGCAGAAAGTTGGAATCACTCCCACAGATTCCAGAGTCCCTCTCTATAA 2476
| |||||||| | ||||||| ||| ||||||||||||||||||||| | ||| || ||
Sbjct 3020 TACTCAAGGGGTACAGAAAGGTGGTATCACTCCCACAGATTCCAGA-T---TCTTTAAAA 3075
Query 2477 T--A--GATGCAGAAGATTGCGAGTCCCTGGAGAGACTAGATTGCTCCTTTCACAATCCA 2532
| | ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 3076 TGGATTGATGCTGAAGATTGTGAGTCCTTGGAGAGACTAGATTGCTCCTTTCACAATCCA 3135
Query 2533 AAGATTTGTCTCAAATTCGCTAAGTGCTTCAAACTGAATCAAGAAGCAAAAGACCTCATC 2592
||||| |||| || | ||||||||| ||||| ||||||||||||| |||||| |||
Sbjct 3136 GAGATTACTCTCTTCTTTGGTAAGTGCTTTAAACTTAATCAAGAAGCAAGAGACCTAATC 3195
Query 2593 ATCCAAACACCGACTAGTGAACATGCCATT-TTACCCGGTGGAGAAGTGCCTTCCTACTT 2651
||||| |||||||||| |||| || | | ||||| ||| |||| |||||| | |||||
Sbjct 3196 ATCCAGACACCGACTA---AACAAGC-AGTCTTACCTGGTAGAGAGGTGCCTGCATACTT 3251
Query 2652 CACTCATCGATCTACAAGCGGGGGTTCATTGACAATAAAGTTGAATGAGAAGCCTCTTCC 2711
|||||| ||| | | | ||||||||||||||||| ||||||||||||| |||||||||
Sbjct 3252 CACTCACCGAGCGA---GTGGGGGTTCATTGACAATTAAGTTGAATGAGAGGCCTCTTCC 3308
Query 2712 TACATCCATGAGATTTAAGGC---CATCTTGTTGGTTCATCAAAG-TGACGATGG---TA 2764
|||||| ||||||| |||||| ||||||| | |||| | | | |||| |||| |
Sbjct 3309 TACATCTATGAGATATAAGGCTTGCATCTTGCTAGTTCGT-ATTGGTGACTATGGCGCTC 3367
Query 2765 A-GA-AGTATCCA--TC-T-AG-TGTTG-TCTCGTT-TT-GGTGTaaaaaaa-GCTGGCA 2813
| || || | || | | | ||||| | ||| | || ||| || || | | ||||
Sbjct 3368 ATGATAG-AGACAAATGGTTACATGTTGCTTTCGGTGTTAGGTCTACAACATTGG-GGCA 3425
Query 2814 TGTAATGTATCCAA-CTTTAGCAGAGCATCTATACACATTTGAAGTCGAA-ACAGCGGTC 2871
| || ||| || ||| | |||||||||| |||||||| ||| ||||| | | |||
Sbjct 3426 CATTATATATTCAGGCTTAA-CAGAGCATCTGTACACATTCGAAATCGAAGAGAA-GGTG 3483
Query 2872 ACTTCCAGCGAGCTTGTCTTTGAGTTCAAGCTCGACA--G-TAGCGATTGGAAGATAAGA 2928
|||||||||||||||||||||||||||||| |||| | | || | | |||||||| ||
Sbjct 3484 ACTTCCAGCGAGCTTGTCTTTGAGTTCAAGGTCGAGAACGGTAACCACTGGAAGATTGGA 3543
Query 2929 GAATTCGGACTACGCAAACT 2948
|||| ||| ||||| ||||
Sbjct 3544 GAATGCGGGTTACGCCAACT 3563
> AT3G04210.1 | Symbols: | Disease resistance protein (TIR-NBS
class) | chr3:1105963-1108069 REVERSE LENGTH=1940
Length=1940
Score = 579 bits (313), Expect = 7e-164
Identities = 915/1194 (77%), Gaps = 87/1194 (7%)
Strand=Plus/Plus
Query 3 GGAGTTTC-AAAG-AATGGGAATC-ACTCCATTCATTGATAATGAGATCAAAAGAGGGG- 58
|||| ||| |||| || ||||||| || |||||||||||| || ||| ||||||||
Sbjct 325 GGAG-TTCAAAAGCAA-GGGAATCGAC-ATATTCATTGATAAAGATATC--AAGAGGGGT 379
Query 59 AA-TCCATCGGTCCTGAGCTCATTC-G-TGCCATTAGAGAATCTAGGATCT-CAG-TTAT 113
|| ||||||||||||||||||| | | || || |||| ||| ||| | | | | || |
Sbjct 380 AAGTCCATCGGTCCTGAGCTCA--CAGAAGCTATCAGAGGATCGAGGGT-TGC-GATTGT 435
Query 114 TTTGCTCTCTAAGAATTACGCTTCTTCAAAGTGGTGTCTTG-ACGAACTGGTGGAGATTA 172
|| ||||| | ||| || |||||||| |||||| | || | || ||| ||| |
Sbjct 436 CTTCCTCTCGAGGAAATATGCTTCTTCGTCGTGGTG-CCTGAATGAGTTGGCACTGATCA 494
Query 173 TGAAGTGCAGAGAAGAGTTGGGTCAAACTGTAG-TGGCCATTTTCTATAAAGTAGATCCA 231
||||||||||| |||||||||||| ||| || | || || |||||||| | | || |||
Sbjct 495 TGAAGTGCAGAAAAGAGTTGGGTCTAACAGT-GATGACCCTTTTCTATGACTTGGACCCA 553
Query 232 TCTGACGTAAAGAAGCTGATCGGAAATTTTGGGCA-AGTATTTAGAA-AAACGTGTGCTG 289
|||| |||| ||||| || |||| |||||||| | | || | || |||| ||| |
Sbjct 554 ACTGATGTAAGGAAGCAGACCGGAGATTTTGGG-ATGGCCTTCA-AAGAAACTTGTAAAG 611
Query 290 GTAAAACAAAGGAAGACATTGGAAGATGGAGACAAGCTCTGGCA-AAAGTGGCTACAATC 348
||||||||||||| || ||||||||||||||||| ||| ||| | |||| || | ||||
Sbjct 612 GTAAAACAAAGGATGAAATTGGAAGATGGAGACATGCTTTGG-AGGAAGTCGCCAAAATC 670
Query 349 GCTGGTTATCATTCAAGCA-ACTGGGATAATGAAGCGGCCATGATCAAGAA-AATCGTAA 406
|| ||||| |||||||||| | |||||||||||||||| ||||||| ||| | || |
Sbjct 671 GCCGGTTACCATTCAAGCATA-TGGGATAATGAAGCGGACATGATC-GGAATAGTCACCA 728
Query 407 CTGATATTTCAAACATGTTGAATAAT-TCCATATCATCAAGTGATTTCGATG-G-GTTAG 463
||||||||||||| | |||||| || || | | |||||||||||| | | | ||||
Sbjct 729 CTGATATTTCAAATACGTTGAA-CATCTCAACGCCGTCAAGTGATTTC-A-GCGACTTAG 785
Query 464 TTGGTAT-GAGAGCTCATTTCGAAAAGA-TGGAACCATTGTTATGCCTAGAGTCAG-ATG 520
|||| || ||| | |||| | ||||| | |||||| | |||||| |||||| || | |||
Sbjct 786 TTGGGATGGAG-GATCATAT-GAAAAAATTGGAACGAATGTTATACCTAGA-TCTGAATG 842
Query 521 AAGTGAGGATGATTGGGATTTGGGGTCCTCCTGGGATTGGGAAGACCACAATTGCCAGAG 580
| ||||||||||| |||||||||||||||||||||||||| ||||| | || |||||||
Sbjct 843 ATGTGAGGATGATAGGGATTTGGGGTCCTCCTGGGATTGGTAAGACTTCCATCGCCAGAG 902
Query 581 TTGTA-TAC--AACCAATTCTCCAACAGTTTTC-AATTGGGTGTCTTTCTGGACAATATC 636
|| || | | || | ||||| |||| |||| | ||| |||||||| |||| | | ||
Sbjct 903 TTTTATTTCGAAAAC-ATTCT--GACAG-TTTCGATTTGAGTGTCTTTATGGAGACTGTC 958
Query 637 AAAGCAAACTATACAAGACC---TTGTTCCGATG-ACTACAGCTC-AAAGTTACAATTGC 691
||| ||||||||||| |||||| |||| || || | || ||| | || || |
Sbjct 959 -AAG--GGTTATACAAGACCAGGTTGTTCGGATGAAC-AC-GGTCTTAAGCTGCACTTAC 1013
Query 692 AAAAACACTTTATGTCTCAAATAATCAACCATAAGGATAT-GGAGATTTTTCATTTAGGA 750
| | || ||| ||||||||||| ||||||| |||||| | | || || ||| ||||||
Sbjct 1014 AGCAGCAGTTTCTGTCTCAAATATTCAACCAGAAGGATGTAGAAG-TTCCTCACTTAGGA 1072
Query 751 GTTGCCCAAGATAGGTTGAA-AGACAAGAAAGTTCTTGTCGTTCTTGATGGCGTGGA-CA 808
|||| ||||| ||||| || |||||||| ||| ||||| || ||||||| ||| || |
Sbjct 1073 GTTGTACAAGACAGGTT-AAGAGACAAGAGAGTGCTTGTTGTGCTTGATGACGTTGATC- 1130
Query 809 AGTCAGTACAACTAGATGCGATGGTGAAAGAAACT-TGTTGGTTTGGTCCTGGGAGTCGA 867
|||||| |||| |||| || |||| || |||| | | |||||||||||||| |||||
Sbjct 1131 AGTCAGCACAATTAGAAGCCATGGCCAAGGAAAATAAG-TGGTTTGGTCCTGGAAGTCGG 1189
Query 868 ATTATCGTGACAACACAAGATC-ATAGGCTTTTTAGAGCACATGGGATTAACCACAT-T- 924
|||||| | || || ||||||| | || ||||| | ||||||||| || || | || |
Sbjct 1190 ATTATCATCACCACGCAAGATCGA-AGACTTTTGAAAGCACATGGAATCAA--AGATGTG 1246
Query 925 TACAAGGTGGATTTTCCACCAGCTGATGAGGCTCTTCAAATCTTCTGCATGTATGCTTTT 984
|||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||||
Sbjct 1247 TACAAGGTGGATTTACCACCACCTGATGATGCTTTTCAAATCTTCTGCATGTATGCTTTT 1306
Query 985 GGTCAGAAG-TCCCCTAAAGATGGTTTTGAGGAGCTTGCTTGGGAAGTTACA-ACATTTG 1042
||| | || || || ||| ||||||| ||||||||||| ||||||| |||| || |||
Sbjct 1307 GGTAA-AACCTCTCCAAAACATGGTTTCGAGGAGCTTGCATGGGAAGCTACATACCTTT- 1364
Query 1043 CGGGTAAACTTCCTTTGGGGCTAAGG-GTTCTGGGCTCCCATTTCCGGGGAATGTCGAAG 1101
| |||| || |||| ||| ||| || ||||||| |||||||| |||||| ||
Sbjct 1365 CTGGTATACACCCTTCGGGAATAAAAAGTA-TGGGCTCTTATTTCCGGAAAATGTCAAAA 1423
Query 1102 CAGGAGTGGATAAA-GTCACTACCAAGGTTAAAAACTAGT---CTTGACACTGA 1151
| ||||||| |||| | | ||| |||||||| |||||| |||||| ||||
Sbjct 1424 CCGGAGTGGGTAAACG-CGTTACAAAGGTTAAGGACTAGTAAGCTTGACTCTGA 1476
> AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class), putative | chr3:9260838-9268797 REVERSE LENGTH=5946
Length=5946
Score = 385 bits (208), Expect = 2e-105
Identities = 681/901 (76%), Gaps = 65/901 (7%)
Strand=Plus/Plus
Query 1863 GTTGAATCT-AAGTTATTGCTCAAGTCTAATCAAGCTCCCCTCTTCTATTGGGA-ATGCC 1920
||||||||| | | | ||||||| ||| | ||||| ||||||||| || ||| |||||
Sbjct 2715 GTTGAATCTCCA-TAACTGCTCAAATCTGGTGAAGCTTCCCTCTTCT-TTTGGACATGCC 2772
Query 1921 ACTAATCTCAAGAAATTAAATCTCCGTAGATGCTCAAATATTA-TGGAGTTTCCTTCTTT 1979
|||||||| || |||| |||| | ||||||||| | ||| |||| |||| || |
Sbjct 2773 ACTAATCTGTGGAGATTAGATCTTAGCGGATGCTCAAGT-TTAGTGGAACTTCCCTCATC 2831
Query 1980 TATT-GAAAAAGCCACCAATCT--AGAGATATTGGATCTTAGTAGTTGCTCAAATTTGGT 2036
|||| |||| | ||| ||||| | ||| || | ||| | | ||||||||| |||
Sbjct 2832 TATTGGAAACA-TCACAAATCTCCA-AGA-GCTGAACCTTTGCAACTGCTCAAATCTGG- 2887
Query 2037 TGAA-CTT-CCTCTTTTTATTAAAAACCTTCA-GAAGTTGCAGAAGTTGAGATTAGG-AG 2092
|||| ||| |||| || |||| ||||||||| | ||| | ||||| || || |
Sbjct 2888 TGAAGCTTCCCTC-TTCTATTGGAAACCTTCATCTA-TTGTTCACTTTGAG-TTTGGCAA 2944
Query 2093 GATGTTC-TAAGCTACAGGTTCTTCCAACCAACATCAACTTGGAATCT-TTGGTTGAACT 2150
|||| | ||| || ||| |||||| | ||| ||||||||| ||||| ||| | |||
Sbjct 2945 GATG-CCAAAAGTTAGAGGCTCTTCCGAGCAATATCAACTTGAAATCTCTTGAACG-ACT 3002
Query 2151 TGACCTCACTGATTGCTCGGCA--TTGAAATTGTTTCCCGAGATTTCTACAAACGTTAGA 2208
||| ||||| |||||||| ||| || ||| | ||||| |||||||| |||||| || ||
Sbjct 3003 TGATCTCACCGATTGCTC-GCAGTTTAAAAGT-TTTCCTGAGATTTCCACAAACATT-GA 3059
Query 2209 GT-TCTCAAGC-TCA-GCGAGACTGCAATAGAAGAAGTGCCTCCCTCGATCGCGTTC-TG 2264
| ||| | | | | | || || ||| |||||||||||||| | || ||| | || ||
Sbjct 3060 ATGCCTCTATCTTGATG-GA-ACCGCAGTAGAAGAAGTGCCTTCATCAATCAAG-TCTTG 3116
Query 2265 GCCTCGTCTTGA-TGAGTTGCATATGTCTTACTTTGAAAACCTCAAGGAACTCCCTCATG 2323
| || | | | | || |||||||||||| ||||| ||||| ||||||||| || | ||||
Sbjct 3117 GTCTAGAC-TCACTGTGTTGCATATGTCATACTTCGAAAAACTCAAGGAATTCTCGCATG 3175
Query 2324 CTCTTTGCAGCATCACAGATCTGT-ACTTG-A-GC-GATACAGAAATACAGGAGGTTCCT 2379
|| | | | ||||| | | | || || | | | || | ||| ||||| || ||| ||
Sbjct 3176 TTC-TAG-A-CATCATA-A-C-GTGGCTAGAATTCGGAGA-AGATATACAAGAAGTTGCT 3228
Query 2380 TCATTGG-TC-AAGAGAATCTCTCGTCTGGATCGA-TTAGTGCTCAAGGGATGCAGAAAG 2436
|| ||| || |||| |||||||||||| || || |||| ||| | ||||||||||
Sbjct 3229 CCA-TGGATCAAAGA-AATCTCTCGTCTACATGGACTTAG-ACTCTACAAATGCAGAAAG 3285
Query 2437 -TTGGAATCACTCCCACAGATTCCAGAGTCCCTCTCTATAATAGATGCAGAAGATTGCGA 2495
|| ||||||||||||| ||||||| || |||||||| ||| |||| |||| ||| ||
Sbjct 3286 CTT-TTATCACTCCCACAGCTTCCAGAATCTCTCTCTATCATAAATGCTGAAGGTTGTGA 3344
Query 2496 GTCCCTGGAGAGACTAGATTGCTCCTTTC-ACAATCCAAAGA-TTTGTCTCAAATTCGCT 2553
|||| |||||| ||||||||||| ||| | ||||||| || | | ||| || || |||
Sbjct 3345 GTCCTTGGAGACACTAGATTGCT-CTTACAACAATCCCTTGAGTCT-TCTTAATTTTGCT 3402
Query 2554 AAGTGCTTCAAACTGAATCAAGAAGCAAAAGACCTCATCATCCAAACACCGACTAGTGAA 2613
|||||||||||||||||||||||||| | |||| |||||||||| | |||||| ||| ||
Sbjct 3403 AAGTGCTTCAAACTGAATCAAGAAGCGAGAGACTTCATCATCCAGATACCGACCAGT-AA 3461
Query 2614 C-ATGCCATTTTACCCGGTGGAGAAGTGCCTTCCTACTTCACTCATCGATCTACAAGCGG 2672
|||| | |||||||||| |||||||||| | ||||||||||| ||| |||| | | |
Sbjct 3462 TGATGCGGTCTTACCCGGTGCAGAAGTGCCTGCATACTTCACTCACCGAGCTACTA-CTG 3520
Query 2673 GGG-TTCATTGACAATAAAGTTGAATGAGAAGCCTCTTCCTACATCCATGAGATTTAAGG 2731
| | ||| ||||| || ||||| ||||||| |||| || |||||||||||||||||||||
Sbjct 3521 GAGCTTCCTTGACCATCAAGTTAAATGAGAGGCCTATTTCTACATCCATGAGATTTAAGG 3580
Query 2732 C 2732
|
Sbjct 3581 C 3581
> AT2G14080.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr2:5925186-5929600 FORWARD LENGTH=3687
Length=3687
Score = 305 bits (165), Expect = 1e-81
Identities = 682/922 (74%), Gaps = 74/922 (8%)
Strand=Plus/Plus
Query 1848 CACTAATCTTCAGAAGTTGAATCTAAGTTATTGCTCAAGTCTAATCAAGCTCCCCTCTTC 1907
|||||||||| || ||||| | || | || |||||||||||| || ||||| || || ||
Sbjct 2487 CACTAATCTTAAGGAGTTGCACCTTACTTGTTGCTCAAGTCTGATAAAGCTTCCATCCTC 2546
Query 1908 TATTGGGAATGCCACTAATCTCAAGAAATTAAAT-CTCCG-TAGATGCTCAAA-TATT-A 1963
||| |||||||||| ||| || |||| || || || || | ||||| ||| | ||
Sbjct 2547 TATCGGGAATGCCATTAACCTGGAGAAGTT-GATACT-CGCTGGATGC-GAAAGT-TTGG 2602
Query 1964 TGGAGTTTCCTTCTTTTATTGAAAAAGCCACCAATCT-AGAGATAT-TGGATCTTAG-TA 2020
||||| | ||||| ||||||| ||||||||| ||||| | |||| | || ||||| | ||
Sbjct 2603 TGGAGCTCCCTTCCTTTATTGGAAAAGCCACTAATCTCA-AGAT-TCTGAATCTTGGATA 2660
Query 2021 GT-TGCTCAAATTTGGTTGAACTT--CCTCTTTTTATTAAAAACCTTCAGAAGTTG-CAG 2076
| | |||| | ||| || | || |||| |||||| ||||||||| |||||| | |
Sbjct 2661 -TCT-CTCATGTCTGG-TGGAGTTACCCTC-CTTTATTGGAAACCTTCATAAGTTGTCTG 2716
Query 2077 AAGTTGA-GATTAGGAGGATGTTCTAAGCTACAGGTTCTTCCAACCAACATCAACTTGGA 2135
|| | | | | | ||||||| |||||||| |||||||| ||||| |||||||||||
Sbjct 2717 AA-CTAAGGCTGA-GAGGATGCAAAAAGCTACAAGTTCTTCCGACCAATATCAACTTGGA 2774
Query 2136 ATCTT-TGGTTGAACTTGACCTCACTGATTGC-TCGGCATTGAAATTGTTTCCCGAGATT 2193
|| || | ||||||||| ||||| |||||| || |||||| ||||| | |||
Sbjct 2775 AT-TTCTTAATGAACTTGATCTCACAGATTGCATC-TTGTTGAAAACATTTCCGGTGATC 2832
Query 2194 TCTACAAACGTTAGA-GTTCTCAAGCTCAGCGAGACTGCA-ATAGAAGAAGTGCCTCCCT 2251
|| |||||| ||| | | |||| | || || | |||| || ||||||||||| ||| | |
Sbjct 2833 TCCACAAACATTAAACG-TCTCCATCTTAGGGGGACT-CAGATAGAAGAAGTTCCTTCGT 2890
Query 2252 CGATCGCGTTC-TGGCCTCGTCTTGATGAGTTGCATATGTCT-TACTTTGAAAACCTCAA 2309
| || | || |||||||| ||||| || ||||| ||| || ||| |||||||||| |
Sbjct 2891 CCCTC-AGGTCATGGCCTCGCCTTGAGGATTTGCAAATG-CTATACAGTGAAAACCTC-A 2947
Query 2310 G-GAACTCCCTCATGCTCTTTG-CAGCATCACAGAT-CTGTACTTGAGCGATACAGAA-A 2365
| ||| || | |||| || ||| || ||||||| | ||| | ||||| |||| | || |
Sbjct 2948 GTGAATTCTCACATGTTC-TTGAGAGGATCACAG-TGCTGGAATTGAGTGATATA-AATA 3004
Query 2366 TACAG-GAGGT-TCCTTCATTGG-TCAAGAGAATCTCTCGTCT-GGATCGATTAGTGCTC 2421
||| | || | || || ||| |||| |||||| ||||||| | ||||||| |||
Sbjct 3005 TAC-GAGAAATGACC-CCA-TGGCTCAATAGAATCACTCGTCTACG-TCGATTAAAACTC 3060
Query 2422 AAG-GGATGCAGAAAGTTGGAATCACTCCCACAGA-TTCCAGAGTCCCTCTCT-ATAATA 2478
|| |||||| |||| ||| |||||||||||| | || | || ||||| | || |
Sbjct 3061 -AGCGGATGCGGAAAACTGGTATCACTCCCACA-ACTTTCGGATTCCCT-AATAATTCTG 3117
Query 2479 GATGCAGAAG-ATTGCGAG-TCCCTGGAGAGACTAGATTGCTCCTTTCACAATCCAAAGA 2536
||||||| || |||| | | || || |||||||||| |||||| ||| |||||||||| |
Sbjct 3118 GATGCAG-AGAATTGTG-GCTCTCTTGAGAGACTAGGTTGCTCTTTTAACAATCCAAATA 3175
Query 2537 TT---TGTCTCAAATTCGCTAAGTGCTTCAAACTGA-ATCAAGAAGCAAAAGACCTCATC 2592
|| |||||| | || | || ||| ||||||| | || ||||||||| |||||| |||
Sbjct 3176 TTAAATGTCTCGACTTTACCAACTGCCTCAAACT-AGATAAAGAAGCAAGAGACCTTATC 3234
Query 2593 ATCCAAACACCGACTAGTGAACATGCCATTTTACCCGGTGGAGAAGTGCCTTCCTACTTC 2652
|| ||| || || || || | || | || |||||| || ||||||| | | ||| ||
Sbjct 3235 ATTCAAGCAACGGCTCGTCATTATTCTATCTTACCCAGTAGAGAAGTTCATGAGTACATC 3294
Query 2653 ACTCATCGATCTACAAGCGGGGGTTCAT-TGACAATAAAGTTGAATGAGAA-GCCTCTTC 2710
||| | ||| | | | || |||| | | || | ||||||||| | || | ||||||
Sbjct 3295 ACTAACCGAGC--C-ATTGGAAGTTC-TCTTACTGTGAAGTTGAATCA-AAGGGCTCTTC 3349
Query 2711 CTACATCCATGAGATTTAAGGC 2732
||||||||||||||||||||||
Sbjct 3350 CTACATCCATGAGATTTAAGGC 3371
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 147641313249
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5