BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893150
Length=1350
Score E
Sequences producing significant alignments: (Bits) Value
AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961106-396... 2250 0.0
AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042876-804... 1157 0.0
AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain | chr2:12644... 1074 0.0
AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:25181... 1057 0.0
AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:25184... 1046 0.0
AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451... 1026 0.0
AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:69377... 1003 0.0
AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182... 981 0.0
> AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961106-3963522
REVERSE LENGTH=1696
Length=1696
Score = 2250 bits (1218), Expect = 0.0
Identities = 1306/1350 (97%), Gaps = 0/1350 (0%)
Strand=Plus/Plus
Query 1 ATGAGAGAAATCCTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136 ATGAGAGAAATCCTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTC 195
Query 61 TGGGAAGTTGTATGTGATGAGCATGGGATTGATCCAACTGGTCGTTACGTTGGAAACTCT 120
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 196 TGGGAAGTTGTATGTGATGAGCATGGTATTGATCCCACTGGTCGTTACGTTGGAAACTCT 255
Query 121 GATCTGCAGTTGGAGCGTGTAAATGTTTACTATAACGAGGCATCATGCGGGAGATATGTT 180
|||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 256 GATCTGCAGTTGGAGCGTGTCAATGTTTACTATAACGAGGCATCCTGCGGAAGATATGTT 315
Query 181 CCCCGTGCCATTCTTATGGATCTTGAGCCTGGTACTATGGACAGTGTCAGAACTGGACCT 240
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 316 CCCCGTGCAATTCTCATGGATCTTGAGCCTGGTACTATGGACAGTGTCAGAACTGGACCT 375
Query 241 TATGGTCAAATCTTCAGACCTGACAACTTTGTTTTCGGGCAATCTGGTGCTGGAAACAAC 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 376 TATGGTCAAATCTTCAGGCCTGACAACTTTGTTTTCGGGCAATCTGGTGCTGGAAACAAC 435
Query 301 TGGGCTAAAGGGCATTATACTGAAGGAGCTGAGCTTATTGATGCTGTACTCGATGTTGTA 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 436 TGGGCTAAAGGGCATTACACTGAAGGAGCTGAGCTTATTGATGCTGTACTCGATGTTGTA 495
Query 361 CGCAAGGAGGCTGAGAATTGTGACTGTCTTCAGGGTTTCCAAGTATGCCACTCGCTTGGT 420
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||| ||||||
Sbjct 496 CGCAAAGAGGCTGAGAATTGCGACTGTCTTCAAGGTTTCCAAGTATGTCACTCACTTGGT 555
Query 421 GGAGGCACTGGGTCTGGAATGGGAACTCTGCTCATATCCAAGATCAGGGAAGAGTATCCT 480
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 556 GGAGGCACCGGGTCTGGAATGGGAACTCTGCTCATATCTAAGATCAGGGAAGAGTATCCT 615
Query 481 GATCGAATGATGCTCACATTTTCTGTCTTCCCATCACCAAAGGTCTCGGACACTGTGGTT 540
||| |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 616 GATAGAATGATGCTTACATTTTCTGTCTTCCCATCACCAAAGGTCTCTGACACAGTGGTT 675
Query 541 GAGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAGAATGCTGATGAGTGTATG 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 676 GAGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAAAATGCTGATGAGTGTATG 735
Query 601 GTTTTGGACAATGAAGCCCTTTACGACATCTGTTTTAGAACACTTAAGCTTACCACTCCT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 736 GTTTTGGACAATGAAGCCCTTTACGACATCTGTTTTAGAACACTTAAGCTTACCACTCCT 795
Query 661 AGCTTTGGTGATCTGAATCATCTGATCTCTGCAACCATGAGTGGAGTTACATGCTGTCTT 720
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 796 AGCTTTGGTGATCTGAATCATCTTATCTCTGCAACCATGAGTGGAGTTACATGCTGTCTT 855
Query 721 AGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGAACCTTATCCCTTTC 780
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 856 AGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGAACCTCATTCCTTTC 915
Query 781 CCTCGTCTCCACTTTTTCATGGTTGGTTTTGCCCCGCTCACTTCACGTGGGTCTCAGCAG 840
||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct 916 CCTCGTCTCCACTTTTTCATGGTTGGTTTTGCCCCTCTCACCTCCCGTGGGTCTCAGCAG 975
Query 841 TACCGTGCACTCACCGTCCCTGAGCTCACCCAACAGATGTGGGATTCAAAGAACATGATG 900
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 976 TACCGTGCACTCACTGTCCCTGAGCTGACCCAACAGATGTGGGATTCAAAGAACATGATG 1035
Query 901 TGTGCAGCAGACCCACGCCACGGGAGGTACCTAACAGCCTCGGCCATGTTCCGTGGCAAG 960
|| ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1036 TGCGCAGCAGACCCGCGCCACGGGCGGTACCTAACTGCCTCGGCCATGTTCCGTGGCAAG 1095
Query 961 ATGAGCACAAAAGAAGTGGATGAGCAGATGATCAACGTACAGAACAAAAACTCTTCCTAC 1020
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1096 ATGAGCACAAAAGAAGTGGACGAGCAGATGATAAACGTACAGAACAAAAACTCTTCCTAC 1155
Query 1021 TTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGCGTGTGTGACATAGCGCCTCGAGGT 1080
|||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct 1156 TTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGCGTCTGTGACATAGCTCCCCGAGGT 1215
Query 1081 CTGTCAATGGCATCGACATTTATTGGGAATTCCACATCGATCCAAGAGATGTTTAGACGG 1140
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1216 CTCTCAATGGCATCGACATTTATTGGGAATTCCACATCGATCCAAGAGATGTTTAGGCGG 1275
Query 1141 GTGAGCGAACAGTTCACTGCTATGTTCAGGAGGAAAGCTTTCTTGCATTGGTACACAGGT 1200
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1276 GTGAGCGAGCAGTTCACTGCTATGTTCAGGAGGAAAGCTTTCTTGCATTGGTACACAGGT 1335
Query 1201 GAAGGAATGGACGAGATGGAGTTCACTGAAGCTGAGAGCAACATGAACGATCTCGTCTCA 1260
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1336 GAAGGAATGGACGAGATGGAGTTTACTGAAGCTGAGAGCAACATGAACGATCTAGTCTCA 1395
Query 1261 GAGTACCAGCAATACCAAGACGCAACTGCAGATGACGAAGGTGAGTATGAAGAAGACGAG 1320
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1396 GAGTACCAGCAATACCAAGACGCAACTGCAGATGACGAAGGCGAGTATGAAGAAGACGAG 1455
Query 1321 GATGAAGAAGAGATATTGGATCATGAGTGA 1350
||||||||||||||||||||||||||||||
Sbjct 1456 GATGAAGAAGAGATATTGGATCATGAGTGA 1485
> AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042876-8044819
FORWARD LENGTH=1727
Length=1727
Score = 1157 bits (626), Expect = 0.0
Identities = 1109/1341 (83%), Gaps = 38/1341 (3%)
Strand=Plus/Plus
Query 1 ATGAGAGAAATCCTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTC 60
||| |||| || |||||||| |||||||| ||||| || |||||||| || | ||||||
Sbjct 87 ATGCGAGAGATTCTTCACATACAAGGTGGCCAATGCGGAAACCAGATCGGAGCTAAGTTC 146
Query 61 TGGGAAGTTGTATGTGATGAGCATGGGATTGATCCAACTGGTCGTTACGTTGGA-A-ACT 118
|||||||| || || | ||||| ||||| ||| | || || | ||| ||| | |
Sbjct 147 TGGGAAGTAGTTTGCGCCGAGCACGGGATCGATTCGACGGGAAGATACCAAGGAGAGA-A 205
Query 119 CTGATCTGCAGTTGGAGCGTGTAAATGTTTACTATAACGAGGC-ATCATGCGGGAGATAT 177
| ||| |||| | || || || ||||| ||||| ||||| || | ||||| |||| |
Sbjct 206 C-GATTTGCAACTCGAACGAGTCAATGTCTACTACAACGAAGCGA-GTTGCGGAAGAT-T 262
Query 178 -GTTCCC-CGTGCCATTCTTATGGATCTTGAGCCTGGTACTATGGACAGTGTCAGAACTG 235
| |||| || ||| | || |||||||| ||||||||||||||||| ||||||||| | |
Sbjct 263 CG-TCCCACGCGCCGTCCTCATGGATCTAGAGCCTGGTACTATGGATAGTGTCAGATCCG 321
Query 236 GACCTTATGGTCAAATCTTCAGACCTGACAACTTTGT-TTTCGGGCAATCTGGTGCTGGA 294
| || || ||||| |||||| | ||||| ||||| || ||| || ||||| ||||| ||
Sbjct 322 GTCCGTACGGTCAGATCTTCCGTCCTGATAACTTCGTATTT-GGTCAATCCGGTGCCGGT 380
Query 295 AACAACTGGGCTAAAGGGCATTATACTGAAGGAGCTGAGCTTATTGATGCTGTACTCGAT 354
||||| ||||||||||| || || |||||||| ||||||||||| ||| | || ||||||
Sbjct 381 AACAATTGGGCTAAAGGACACTACACTGAAGGTGCTGAGCTTATCGATTCCGTTCTCGAT 440
Query 355 GTTGTACGCAAGGAGGCTGAGAATTGTGACTGTCTT-CAGGGTTTCCAAGTATGCCACTC 413
||||| || ||||| ||||||||||||||||| ||| || || |||||||| || |||||
Sbjct 441 GTTGTTCGTAAGGAAGCTGAGAATTGTGACTG-CTTGCAAGGATTCCAAGTGTGTCACTC 499
Query 414 GCTT-GGTGGAGGCACTGGGTCTGGAATGGGAAC-TCTGCTCATATCCAAGATCAGGGAA 471
|| || ||||| ||||| |||||||||||||| | || | || || ||||| ||||||
Sbjct 500 -ATTAGGAGGAGGAACTGGATCTGGAATGGGAACGT-TGTTGATTTCAAAGATTAGGGAA 557
Query 472 GAGTATCCTGATCGAATGATGCTCACATTTTCTGTCTTCCCATCACC-AAAGGTCTCGGA 530
|||||||| ||| | |||||||| || |||||||| ||||||||||| ||| || || ||
Sbjct 558 GAGTATCCAGATAGGATGATGCTGACGTTTTCTGTATTCCCATCACCGAAA-GTGTCAGA 616
Query 531 CACTGTGGTTGAGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAGAATGCTGA 590
|||||| |||||||| || ||||| || || || ||||||||||| ||||||||||| ||
Sbjct 617 CACTGTTGTTGAGCCTTATAATGCAACTCTCTCTGTTCATCAGCTTGTGGAGAATGCAGA 676
Query 591 TGAGTGTATGGTT-TTGGACAATGAAGCCCTTTACGACATCTGTTTTAGAACACTTAAGC 649
||||||||||||| || ||||||||||| || || ||||| || || ||||| |||||||
Sbjct 677 TGAGTGTATGGTTCTT-GACAATGAAGCTCTCTATGACATTTGCTTCAGAACTCTTAAGC 735
Query 650 TTACCACTCCTAGCTTTGGTGATC-TGAATCATCTGATCTCTGCAACCATGAGTGGAGTT 708
| |||||||| |||||||| || | ||||||| || |||||||||||||||||||| ||
Sbjct 736 TCACCACTCCAAGCTTTGGAGA-CTTGAATCACCTCATCTCTGCAACCATGAGTGGTGTC 794
Query 709 ACATGCTGTCTTAGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGAAC 768
|| ||||| ||| | |||||||||||||| |||||||| ||| | ||||| ||||||||
Sbjct 795 ACTTGCTGCCTTCGTTTCCCGGGTCAGCTAAACTCTGACCTGCGCAAGCTTGCAGTGAA- 853
Query 769 CTT-ATCCCTTTCCCTCGTCTCCACTTTTTCATGGTTGGTTTTGCCCCGCTCACTTCACG 827
|| ||||| ||||||||||||||||| ||||||||||| ||||| || ||||| || ||
Sbjct 854 TTTAATCCCATTCCCTCGTCTCCACTTCTTCATGGTTGGGTTTGCACCACTCACATCTCG 913
Query 828 TGGGTCTCAGCAGTACCGTGCAC-TCACCGTCCCTGAGCTCACCCAACAGATGTGGGATT 886
||| || ||||| ||| | || | | ||||||||||||||||| |||||||||||||||
Sbjct 914 TGGATCACAGCAATACAGAGC-CTTAACCGTCCCTGAGCTCACTCAACAGATGTGGGATG 972
Query 887 CAAAGAACATGATGTGTGCAGCAGACCCACGCCACGGGAGGTACCTAACAGCCTCGGCCA 946
| ||||| |||||||||||||| || ||||||||||| |||||| | |||||||| ||||
Sbjct 973 CCAAGAATATGATGTGTGCAGCTGATCCACGCCACGGCAGGTACTTGACAGCCTCAGCCA 1032
Query 947 TGTTCCGTGGCAAGATGAGCACAAAAGAAGTGGATGAGCAGATGATCAACGTACAGAACA 1006
||||| | ||||| |||||||| |||||||| || || |||||||||||||| |||||||
Sbjct 1033 TGTTCAGAGGCAAAATGAGCACGAAAGAAGTTGACGAACAGATGATCAACGTTCAGAACA 1092
Query 1007 AAAACTCTTCCTACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGCGTGTGTGACA 1066
| ||||| || ||||||||||||||||| |||||||||||||| |||| |||||||||||
Sbjct 1093 AGAACTCGTCATACTTTGTGGAATGGATCCCAAACAACGTGAAATCAACCGTGTGTGACA 1152
Query 1067 TAGCGCC-TCGAGGTCTGTCAATGGCATCGACATTT-ATTGGGAATTCCACATCGATCCA 1124
| | || | ||||||| |||||| ||||| ||| || ||||| || |||||||||||
Sbjct 1153 TTCCACCAAC-AGGTCTGAAAATGGCTTCGAC-TTTCATCGGGAACTCGACATCGATCCA 1210
Query 1125 AGAGATGTTTAGACGGGTGAGCGAACAGTTCACTGCTATGTTCAGGAGGAAAGCTTTCTT 1184
||||||||||| || ||||||||||||||||| || |||||||| || |||||||||||
Sbjct 1211 GGAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCGATGTTCAGAAGAAAAGCTTTCTT 1270
Query 1185 GCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACTGAAGCTGAGAGCAACAT 1244
|||||||||||||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct 1271 GCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGCAACAT 1330
Query 1245 GAACGATCTCGTCTCAGAGTACCAGCAATACCAAGACGCAACTGCAGATGACGAAG--G- 1301
||| ||| | || |||||||| || || |||||||||||||| || ||||| |||| |
Sbjct 1331 GAATGATTTGGTATCAGAGTATCAACAGTACCAAGACGCAACGGCTGATGAGGAAGAAGG 1390
Query 1302 -T--GAGTATGAAGAAGACGA 1319
| |||||||||||||||||
Sbjct 1391 GTATGAGTATGAAGAAGACGA 1411
> AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain | chr2:12644047-12646037
REVERSE LENGTH=1666
Length=1666
Score = 1074 bits (581), Expect = 0.0
Identities = 1079/1319 (82%), Gaps = 36/1319 (3%)
Strand=Plus/Plus
Query 13 CTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTCTGGGAAGTTG-T 71
||||| |||||||| |||||||| || ||||| || ||||||||||| |||||||| | |
Sbjct 118 CTTCATATTCAAGGAGGTCAATGCGGAAACCAAATCGGTTCCAAGTTTTGGGAAGTGGTT 177
Query 72 -ATGTGATGAGCATGGGATTGATCCA-ACTGGTCGTTACGTTGGAAACTCTGA-TCTGCA 128
|| | ||||| ||||||||| || || || || || || ||| | || || | | ||
Sbjct 178 AATCT--CGAGCACGGGATTGAT-CAGACGGGACGGTATGTAGGAGATTCCGAGT-TACA 233
Query 129 G-TTGGAGCGTGTAAATGTTTACTATAACGAGGC-ATCATGCGGGAGATATGTTCCCCGT 186
| || ||| | || ||||| ||||| |||||||| | || || || || ||||| ||
Sbjct 234 GCTT-GAGAGGGTTAATGTATACTACAACGAGGCGA-GTTGTGGAAGGTACGTTCCTCGC 291
Query 187 GCCATTCTTATGGATCTT-GAGCCTGGTACTATGGACAGTGTCAGAACTGGACCTTATGG 245
|| |||| |||||| || |||||||| || ||||||||||||||| |||| || || ||
Sbjct 292 GCTGTTCTCATGGAT-TTGGAGCCTGGAACCATGGACAGTGTCAGATCTGGTCCGTACGG 350
Query 246 TCAAATC-TTCAGACCTGACAACTTTGTTTTCGGGCAATCTGGTGCTGGAAACAACTGGG 304
||| ||| ||| |||| || ||||| || ||||| || || |||||||| || |||||||
Sbjct 351 TCAGATCTTTC-GACCGGATAACTTCGTCTTCGGTCAGTCCGGTGCTGGGAATAACTGGG 409
Query 305 CTAAAGGGCATTATACTGAAGGAGCTGAGCTTATTGATGCTGTACTCGATGTTGTACGCA 364
||||||| || || |||||||| ||||||||||||||| | || || |||||||| ||||
Sbjct 410 CTAAAGGTCACTACACTGAAGGTGCTGAGCTTATTGATTCGGTCCTTGATGTTGTTCGCA 469
Query 365 AGGAGGCTGAGAATTGTGACTGTCTTC-AGGGTTTCCAAGTATGCCACTCGCTT-GGTGG 422
| ||||||||||| |||||||| |||| ||| ||| || || ||||| || ||| || ||
Sbjct 470 AAGAGGCTGAGAACTGTGACTGCCTTCAAGGATTT-CAGGTGTGCCATTC-CTTGGGAGG 527
Query 423 AGGCACTGGGTCTGGAATGGGAACTCTGCTCATATCCAAGATCAGGGAAGAGTATCCTGA 482
||| ||||| ||||||||||||||| || | ||||| ||||||||||| ||||| || ||
Sbjct 528 AGGAACTGGTTCTGGAATGGGAACTTTGTTGATATCTAAGATCAGGGAGGAGTACCCAGA 587
Query 483 TCGAATGATGCTCACATTT-TCTGTCTTCCCATCACCAAAGGTCTCGGACACTGTGGTTG 541
|| |||||| | || ||| ||||| |||||||| || ||||| || |||||||| || |
Sbjct 588 CCGTATGATGATGAC-TTTCTCTGTGTTCCCATCGCCTAAGGTGTCTGACACTGTTGTGG 646
Query 542 AGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAGAATGCTGATGAGTGTATGG 601
|||| ||||| || ||||| || || || ||||| || ||||| ||||||||||||||||
Sbjct 647 AGCCTTACAACGCAACACTATCTGTGCACCAGCTTGTTGAGAACGCTGATGAGTGTATGG 706
Query 602 TT-TTGGACAATGAAGCCCTT-TACGACATCTGTTTTAGAACACTTAAGCTTACCACTCC 659
|| || ||||| |||| | || || ||||| || || | ||||| ||||||| ||||||
Sbjct 707 TTCTT-GACAACGAAG-CTTTGTATGACATTTGCTTCCGTACACTCAAGCTTAGCACTCC 764
Query 660 TAGCTTTGGTGATCTGAATCATC-TGATCTCTGCAACCATGAGTGGAGTTACATGCTGTC 718
|| |||||||||||||| || | ||||||||||||||||| ||| || || |||||||
Sbjct 765 AAGTTTTGGTGATCTGAACCA-CTTGATCTCTGCAACCATGTCTGGTGTAACCTGCTGTC 823
Query 719 TTAGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGAACCTTATCCCTT 778
|||||||||| ||||| || |||||||||||| | ||||| || ||||| || ||||| |
Sbjct 824 TTAGGTTCCCTGGTCAACTGAACTCTGATCTGCGAAAGCTAGCTGTGAATCTGATCCCAT 883
Query 779 TCCCTCGTCTCCACTTTTTCATGGTTGGTTTTGCCCCGCTCACTTCACGTGGGTCTCAGC 838
|||||||||||||||| |||||||| || ||||| || ||||| || ||||| |||||||
Sbjct 884 TCCCTCGTCTCCACTTCTTCATGGTGGGATTTGCTCCTCTCACCTCTCGTGGATCTCAGC 943
Query 839 AGTACCGTGCA-CTCACCGTCCCTGAGCTCACCCAACAGATGTGGGATTCAAAGAACATG 897
|||||||| | ||||| ||||| |||||||| || || ||||||||| | |||||||||
Sbjct 944 AGTACCGT-AACCTCACTGTCCCAGAGCTCACTCAGCAAATGTGGGATGCTAAGAACATG 1002
Query 898 ATGTGTGCAGCAGACCCACGCCACGGGAGGTACCTAACAGCCTCGGCCATGTTCCGTGGC 957
|||||||| || |||||| | ||||| | ||||| || || || ||||||||||||||
Sbjct 1003 ATGTGTGCTGCTGACCCAAGACACGGTCGCTACCTCACTGCTTCAGCCATGTTCCGTGGA 1062
Query 958 AAGATGAGCACAAAAGAAGTGGATGAGCAGATGATCAACGTACAGAACAAAAACTCTTCC 1017
||||||||||| || || || ||||| |||||| | |||||||||||||| ||||| |||
Sbjct 1063 AAGATGAGCACCAAGGAGGTCGATGAACAGATGCTGAACGTACAGAACAAGAACTCCTCC 1122
Query 1018 TACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGCGTGTGTGACATAGCGCCT-CG 1076
||||||||||||||||| || |||||||| || |||| ||| |||||||| | ||| |
Sbjct 1123 TACTTTGTGGAATGGATCCCTAACAACGTCAAATCAACCGTCTGTGACATTCCCCCTAC- 1181
Query 1077 AGGTCTGTCA-ATGGCATCGACATTTATTGGGAATTCCACATCGATCCAAGAGATGTTTA 1135
|||||| | ||||| || || || ||||| || || || ||||||||||||||||| |
Sbjct 1182 TGGTCTG-AAGATGGCTTCAACGTTCATTGGTAACTCAACTTCGATCCAAGAGATGTTCA 1240
Query 1136 GACGGGTGAGCGAACAGTTCACTGCTATGTTCAGGAGGAAA-GCTTTCTTGCATTGGTAC 1194
| || || || || || ||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 1241 GGCGTGTCAGTGAGCAATTCACTGCTATGTTCAGGA-GAAAGGCTTTCTTGCATTGGTAC 1299
Query 1195 ACAGGTGAAGGAATGGACGAGATGGAGTTCACTGAAGCTGAGAGCAACATGAACGATCTC 1254
||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1300 ACAGGTGAAGGTATGGATGAGATGGAGTTCACTGAAGCTGAAAGCAACATGAACGATCTT 1359
Query 1255 GTCTCAGAGTACCAGCAATACCAAGACGCAACTGCAGATGACGAAGGTGAGTATGAAGA 1313
||||| ||||| ||||| || ||||| ||||| || ||||| ||||| || ||||||||
Sbjct 1360 GTCTCTGAGTATCAGCAGTATCAAGATGCAACGGCTGATGAAGAAGGAGAATATGAAGA 1418
> AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:25181415-25183729
FORWARD LENGTH=1726
Length=1726
Score = 1057 bits (572), Expect = 0.0
Identities = 1088/1335 (81%), Gaps = 43/1335 (3%)
Strand=Plus/Plus
Query 13 CTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTCTGGGAAGTTGTA 72
|||||||| || ||||||||||| || |||||||| || |||||||||||||||| ||
Sbjct 158 CTTCACATCCAGGGTGGTCAATGCGGTAACCAGATCGGCGCCAAGTTCTGGGAAGTGGTT 217
Query 73 TGTGATGAGCATGGGATTGATCCAACTGGTCGTTACGTTGGAAACTCTGATCTGC-AGTT 131
|| | ||||| || || |||||||| || | ||| ||| |||| ||||||| | ||
Sbjct 218 TGCGCCGAGCACGGCATCGATCCAACCGGAAGGTACACCGGAGACTCAGATCTGCAACTT 277
Query 132 GGAGCGTGTAAATGTTTACTATAACGAGGC-ATCATGCGGGAGATAT-GTTCCCCGTGCC 189
||||| | || |||||||| || || || | ||||| |||| | ||||| |||| |
Sbjct 278 -GAGCGCATCAACGTTTACTACAATGAAGCGA-GTTGCGGTAGAT-TCGTTCCTCGTG-C 333
Query 190 A-TTCTTATGGATCTT-GAGCCTGGTACTATGGACAGTGTCAGAACTGGACCTTATGGTC 247
| | || |||||| || |||||||| |||||||| ||| ||||| ||||||| || ||||
Sbjct 334 AGTGCTCATGGAT-TTGGAGCCTGGGACTATGGATAGTCTCAGATCTGGACCGTACGGTC 392
Query 248 AAATC-TTCAGACCTGACAACTTTGT-TTTCGGGCAATCTGGTGCTGGAAACAACTGGGC 305
| | | ||| ||||||| ||||| || ||| || ||||| |||||||| |||||||||||
Sbjct 393 AGACCTTTC-GACCTGATAACTTCGTCTTT-GGCCAATCCGGTGCTGGTAACAACTGGGC 450
Query 306 TAAAGGG-CATTATACTGAAGGAGCTGAGCTTATTGATGCTGTACTCGATGTTGTACGCA 364
||||| || || || ||||||||||| || || ||| | || ||||||||||| || |
Sbjct 451 -CAAGGGACACTACACGGAAGGAGCTGAACTAATCGATTCCGTTCTCGATGTTGTTCGTA 509
Query 365 AGGAGGCTGAGAATTGTGACTGTCTTC-AGGGTTTCCAAGTATGCCACTCGCTT-GGTGG 422
|||| |||||||| ||||||||||| | |||| ||||| || || |||||| || || ||
Sbjct 510 AGGAAGCTGAGAACTGTGACTGTCTCCAAGGG-TTCCAGGTTTGTCACTCG-TTGGGAGG 567
Query 423 AGGCACTGGGTCTGGAATGGGAAC-TCTGCTCATATCCAAGATCAGGGAAGAGTATCCTG 481
||| ||||| ||||| |||||||| | || | || || |||||| | |||||||| || |
Sbjct 568 AGGAACTGGATCTGGTATGGGAACAT-TGTTGATCTCTAAGATCCGTGAAGAGTACCCAG 626
Query 482 ATCGAATGATGCTCACATTTTCTGTCTTCCCATCACCAAAGGTCTCGGACACTGTGGTTG 541
|||| |||||||| || || || || ||||| ||||||||||| || || ||||||||||
Sbjct 627 ATCGCATGATGCTTACCTTCTCGGTGTTCCCTTCACCAAAGGTTTCTGATACTGTGGTTG 686
Query 542 AGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAGAATGCTGATGAGTGTATGG 601
|||| ||||| || || || || || |||||||| || ||||||||||||||||| ||||
Sbjct 687 AGCCTTACAACGCTACTCTGTCTGTCCATCAGCTTGTTGAGAATGCTGATGAGTGCATGG 746
Query 602 TT-TTGGACAATGAAGCCCTT-TACGACATCTGTTTTAGAACACTTAAGCTTACCACTCC 659
|| || || |||| || |||| ||||| || || || || || || || || || || ||
Sbjct 747 TTCTT-GATAATG-AGGCCTTGTACGATATTTGCTTCAGGACTCTCAAACTCACTACCCC 804
Query 660 TAGCTTTGGTGATCTGAATCATC-TGATCTCTGCAACCATGAGTGGAGTTACATGCTGTC 718
|||||||||||| |||| || | |||| ||||| || ||| ||| || || |||||||
Sbjct 805 CAGCTTTGGTGATTTGAACCA-CTTGATTTCTGCTACTATGTCTGGTGTGACTTGCTGTC 863
Query 719 TTAGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGAACCTTATCCCTT 778
| |||||||| ||||| ||||||||||| || | ||||| || ||||| || ||||| |
Sbjct 864 TGAGGTTCCCTGGTCAACTCAACTCTGACCTCCGAAAGCTTGCTGTGAATCTCATCCCAT 923
Query 779 TCCCTCGTCTCCACTTTTTCATGGTTGGTTTTGCCCCGCTCACTTCACGTGGGTCTCAGC 838
|||| ||||| ||||| |||||||| |||||||| || ||||| ||| | || |||||||
Sbjct 924 TCCCCCGTCTTCACTTCTTCATGGTGGGTTTTGCTCCTCTCACCTCAAGAGGTTCTCAGC 983
Query 839 AGTACCGTGCACTCACCGTCCCTGAGCTCACCCAACAGATGTGGGATTCAAAGAACATGA 898
|||||||| | ||||| ||||||||||||||||| || |||||||| || ||||||||||
Sbjct 984 AGTACCGTTCCCTCACAGTCCCTGAGCTCACCCAGCAAATGTGGGACTCCAAGAACATGA 1043
Query 899 TGTGTGCAGCAGACCCACGCCACGGGA-GGTACCTAACAGCCTCGGCCATGTTCCGTGGC 957
||||||| ||||||||| | ||| ||| | ||||| |||||||| |||||||||||||||
Sbjct 1044 TGTGTGCTGCAGACCCAAGGCAC-GGACGCTACCTCACAGCCTCTGCCATGTTCCGTGGC 1102
Query 958 AAGATGAGCACAAAAGAAGTGGATGAGCAGATGATCAACGTACAGAACAAAAACTCTTCC 1017
|||||||||||||| ||||| || ||||||||| | || || |||||||| ||||| |||
Sbjct 1103 AAGATGAGCACAAAGGAAGTTGACGAGCAGATGCTGAATGTGCAGAACAAGAACTCGTCC 1162
Query 1018 TACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGC-GTGTGTGACATAGCGCCT-C 1075
||||||||||| ||||| || ||||||||||| || | | || |||||||| | ||| |
Sbjct 1163 TACTTTGTGGAGTGGATCCCCAACAACGTGAAATCGA-CAGTCTGTGACATCCCACCTAC 1221
Query 1076 GAGGTCTGTCA-ATGGCATCGACATTT-ATTGGGAATTCCACATCGATCCAAGAGATGTT 1133
|||||| | |||||||| || ||| ||||| || || ||||| ||||||||||||||
Sbjct 1222 T-GGTCTGA-AGATGGCATCAAC-TTTCATTGGAAACTCAACATCAATCCAAGAGATGTT 1278
Query 1134 TAGACGGGTGAGCGAACAGTTCACTGCTATGTTCAGGAGGAAAG-CTTTCTTGCATTGGT 1192
|| || ||||| || |||||||| |||||||||||||| |||| |||||||||||||||
Sbjct 1279 CAGGCGAGTGAGTGAGCAGTTCACAGCTATGTTCAGGAG-AAAGGCTTTCTTGCATTGGT 1337
Query 1193 ACACAGGTGAAGGAATGGACGAGATGGAGTTCACTGAAGCTGAGAGCAACATGAACGATC 1252
|||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct 1338 ACACAGGTGAGGGAATGGACGAGATGGAATTCACAGAAGCGGAGAGCAACATGAACGATC 1397
Query 1253 TCGTCTCAGAGTACCAGCAATACCAAGACGCAACTGCAGATGACGAAGGTGAGTATGAAG 1312
| || ||||||||||||||||||||||| |||||||| ||||| |||||||| || || |
Sbjct 1398 TTGTGTCAGAGTACCAGCAATACCAAGATGCAACTGCGGATGAAGAAGGTGACTACGA-G 1456
Query 1313 AAGACGAGGATGAAG 1327
|| ||||| ||||
Sbjct 1457 --GATGAGGAAGAAG 1469
> AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:25184397-25186711
FORWARD LENGTH=1742
Length=1742
Score = 1046 bits (566), Expect = 0.0
Identities = 1086/1335 (81%), Gaps = 43/1335 (3%)
Strand=Plus/Plus
Query 13 CTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTCTGGGAAGTTGTA 72
|||||||| || ||||||||||| || |||||||| || |||||||||||||||| ||
Sbjct 117 CTTCACATCCAGGGTGGTCAATGCGGTAACCAGATCGGAGCCAAGTTCTGGGAAGTGGTT 176
Query 73 TGTGATGAGCATGGGATTGATCCAACTGGTCGTTACGTTGGAAACTCTGATCTGC-AGTT 131
|| | ||||| || || |||||||| || | ||| ||| |||| ||||||| | ||
Sbjct 177 TGCGCCGAGCACGGCATCGATCCAACCGGAAGGTACACCGGAGACTCAGATCTGCAACTT 236
Query 132 GGAGCGTGTAAATGTTTACTATAACGAGGC-ATCATGCGGGAGATAT-GTTCCCCGTGCC 189
||||| | || |||||||| || || || | ||||| |||| | ||||| |||| |
Sbjct 237 -GAGCGCATCAACGTTTACTACAATGAAGCGA-GTTGCGGTAGAT-TCGTTCCTCGTG-C 292
Query 190 A-TTCTTATGGATCTT-GAGCCTGGTACTATGGACAGTGTCAGAACTGGACCTTATGGTC 247
| | || |||||| || |||||||| |||||||| ||| ||||| ||||||| || ||||
Sbjct 293 AGTGCTCATGGAT-TTGGAGCCTGGGACTATGGATAGTCTCAGATCTGGACCGTACGGTC 351
Query 248 AAATC-TTCAGACCTGACAACTTTGT-TTTCGGGCAATCTGGTGCTGGAAACAACTGGGC 305
| | | ||| ||||||| ||||| || ||| || ||||| ||||| || |||||||||||
Sbjct 352 AGACCTTTC-GACCTGATAACTTCGTCTTT-GGTCAATCCGGTGCGGGTAACAACTGGGC 409
Query 306 TAAAGGG-CATTATACTGAAGGAGCTGAGCTTATTGATGCTGTACTCGATGTTGTACGCA 364
||||| || || |||||||||||||| || || ||| | || ||||||||||| || |
Sbjct 410 -CAAGGGACACTACACTGAAGGAGCTGAACTAATCGATTCCGTTCTCGATGTTGTTCGTA 468
Query 365 AGGAGGCTGAGAATTGTGACTGTCTTC-AGGGTTTCCAAGTATGCCACTCGCTT-GGTGG 422
|||| |||||||| |||||||| || | |||| ||||| || || ||||| || || ||
Sbjct 469 AGGAAGCTGAGAACTGTGACTGCCTCCAAGGG-TTCCAGGTTTGTCACTC-ATTGGGAGG 526
Query 423 AGGCACTGGGTCTGGAATGGGAAC-TCTGCTCATATCCAAGATCAGGGAAGAGTATCCTG 481
||| ||||| ||||| |||||||| | || | || || |||||| | |||||||| || |
Sbjct 527 AGGAACTGGATCTGGTATGGGAACAT-TGTTGATCTCTAAGATCCGTGAAGAGTACCCAG 585
Query 482 ATCGAATGATGCTCACATTTTCTGTCTTCCCATCACCAAAGGTCTCGGACACTGTGGTTG 541
|||| |||||||| || || || || ||||| ||||||||||| || || |||||||| |
Sbjct 586 ATCGCATGATGCTTACCTTCTCGGTGTTCCCTTCACCAAAGGTTTCTGATACTGTGGTGG 645
Query 542 AGCCATACAATGCGACACTT-TCAGTTCATCAGCTGGTGGAGAATGCTGATGAGTGTATG 600
|||| ||||| || || || || ||||||||||| || ||||||||||||||||| |||
Sbjct 646 AGCCTTACAACGCTAC-TTTATCTGTTCATCAGCTTGTTGAGAATGCTGATGAGTGCATG 704
Query 601 GTT-TTGGACAATGAAGCCCTT-TACGACATCTGTTTTAGAACACTTAAGCTTACCACTC 658
||| || || || | || |||| ||||| || || || || || || || || || || |
Sbjct 705 GTTCTT-GATAACG-AGGCCTTGTACGATATTTGCTTCAGGACTCTCAAACTCACTACCC 762
Query 659 CTAGCTTTGGTGATCTGAATCATCTGATCTCTGCAACCATGAGTGGAGTTACATGCTGTC 718
| |||||||||||| |||| ||| |||| ||||| || ||| ||| || || |||||||
Sbjct 763 CCAGCTTTGGTGATTTGAACCATTTGATATCTGCCACTATGTCTGGTGTGACTTGCTGTC 822
Query 719 TTAGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGAACCTTATCCCTT 778
| |||||||| ||||| ||||||||||| || | ||||| || ||||| || ||||| |
Sbjct 823 TGAGGTTCCCTGGTCAACTCAACTCTGACCTCCGTAAGCTTGCTGTGAATCTCATCCCAT 882
Query 779 TCCCTCGTCTCCACTTTTTCATGGTTGGTTTTGCCCCGCTCACTTCACGTGGGTCTCAGC 838
|||||||||| ||||| ||||||||||||||||| || ||||| ||| | || || ||||
Sbjct 883 TCCCTCGTCTTCACTTCTTCATGGTTGGTTTTGCTCCTCTCACCTCAAGAGGTTCACAGC 942
Query 839 AGTACCG-TGCACTCACCGTCCCTGAGCTCACCCAACAGATGTGGGATTCAAAGAACATG 897
||||||| | | ||||| ||||||||||||||||| || |||||||| || |||||||||
Sbjct 943 AGTACCGCT-CCCTCACAGTCCCTGAGCTCACCCAGCAAATGTGGGACTCCAAGAACATG 1001
Query 898 ATGTGTGCAGCAGACCCACGCCACGGGA-GGTACCTAACAGCCTCGGCCATGTTCCGTGG 956
|||||||| ||||||||| | ||| ||| | ||||| |||||||| ||||||||||||||
Sbjct 1002 ATGTGTGCTGCAGACCCAAGGCAC-GGACGCTACCTCACAGCCTCTGCCATGTTCCGTGG 1060
Query 957 CAAGATGAGCACAAAAGAAGTGGATGAGCAGATGATCAACGTACAGAACAAAAACTCTTC 1016
||||||||||||||| ||||| || ||||||||| | || || |||||||| ||||| ||
Sbjct 1061 CAAGATGAGCACAAAGGAAGTTGACGAGCAGATGCTGAATGTTCAGAACAAGAACTCGTC 1120
Query 1017 CTACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGC-GTGTGTGACATAGCGCCT- 1074
|||||||||||| ||||| || ||||||||||| |||| | || ||||| || | |||
Sbjct 1121 CTACTTTGTGGAGTGGATCCCCAACAACGTGAAATCAA-CAGTCTGTGATATCCCACCTA 1179
Query 1075 CGAGGTCTGTCA-ATGGCATCGACATTT-ATTGGGAATTCCACATCGATCCAAGAGATGT 1132
| |||||| | ||||| || || ||| ||||| || || |||||||||||||||||||
Sbjct 1180 CT-GGTCTGA-AGATGGCTTCCAC-TTTCATTGGAAACTCAACATCGATCCAAGAGATGT 1236
Query 1133 TTAGACGGGTGAGCGAACAGTTCACTGCTATGTTCAGGAGGAAAGCTTTCTTGCATTGGT 1192
| || || ||||| || |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1237 TCAGGCGAGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGCTTTCTTGCATTGGT 1296
Query 1193 ACACAGGTGAAGGAATGGACGAGATGGAGTTCACTGAAGCTGAGAGCAACATGAACGATC 1252
|||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1297 ACACAGGTGAGGGAATGGACGAGATGGAGTTCACAGAAGCAGAGAGCAACATGAACGATC 1356
Query 1253 TCGTCTCAGAGTACCAGCAATACCAAGACGCAACTGCAGATGACGAAGGTGAGTATGAAG 1312
| || ||||||||||||||||||||||| ||||| || ||||| |||||||| || || |
Sbjct 1357 TTGTGTCAGAGTACCAGCAATACCAAGATGCAACGGCTGATGAAGAAGGTGACTACGA-G 1415
Query 1313 AAGACGAGGATGAAG 1327
|| ||||| ||||
Sbjct 1416 --GATGAGGAAGAAG 1428
> AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451141-28453640
REVERSE LENGTH=1619
Length=1619
Score = 1026 bits (555), Expect = 0.0
Identities = 1081/1335 (81%), Gaps = 35/1335 (3%)
Strand=Plus/Plus
Query 1 ATGAGAGAAATCCTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTC 60
|||||||||||||| ||| | ||||| || ||||| || ||||| || |||||||| |||
Sbjct 39 ATGAGAGAAATCCTCCACGTCCAAGGCGGCCAATGCGGTAACCAAATCGGTTCCAAATTC 98
Query 61 TGGGAAGTTGTATGTGATGAGCATGG-GATTGATCCAACTGGTCGTT---ACGTTGGA-A 115
||||||||| | || || || || || | ||||||| || || |||| ||| | ||
Sbjct 99 TGGGAAGTTATCTGCGACGAACACGGCG-TTGATCCCACCGGACGTTACAACGGT-GATT 156
Query 116 ACTCTGATCTGCAGTTGGAGCGTGTAAATGTTTACTATAACGAGGCATCAT-GCGGGAGA 174
| | ||||| ||| | || ||| | |||||||| || || || || || | | || |
Sbjct 157 CCGCCGATCTTCAGCTCGAACGTATCAATGTTTATTACAATGAAGCTTC-TGGTGGTCGT 215
Query 175 TATGTTCCCCGTGCCATTCTTATGGATCTTGAGCCTGGTACTATGGACAGTGTCAGAACT 234
|| ||||| ||||| |||| |||||||| ||||||||||||||||| ||| ||||| ||
Sbjct 216 TACGTTCCTCGTGCTGTTCTCATGGATCTCGAGCCTGGTACTATGGATAGTATCAGATCT 275
Query 235 GGACCTTATGGTCAAATCTTCAGACCTGACAACTTTGT-TTTCGGGCAATCTGGTGCTGG 293
|| || || ||||| || ||| | ||||| ||||| || ||| || ||||| ||||| ||
Sbjct 276 GGTCCCTACGGTCAGATTTTCCGTCCTGATAACTTCGTCTTT-GGTCAATCCGGTGCCGG 334
Query 294 AAACAACTGGGCTAAAGGGCATTATACTGAAGGAGCTGAGCTTATTGATGCTGTACTCGA 353
||| || ||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||
Sbjct 335 AAATAATTGGGCGAAAGGTCATTATACTGAAGGTGCTGAACTTATTGATGCTGTTCTCGA 394
Query 354 TGTTGTACGCAAGGAGGCTGAGAATTGTGACTGTCTTC-AGGGTTTCCAAGTATGCCACT 412
|||||| || ||||| |||||||| ||||| || |||| ||||||| |||||||| ||||
Sbjct 395 TGTTGTTCGTAAGGAAGCTGAGAACTGTGATTGCCTTCAAGGGTTT-CAAGTATGTCACT 453
Query 413 CGCTTGGTGGAGGCACTGGG-TCTGGAATGGGAACTCTGC-TCATATCCAAGATCAGGGA 470
| ||||| |||||||| ||| || |||||||||||||| | | ||||| |||||| | ||
Sbjct 454 CTCTTGGAGGAGGCAC-GGGTTCAGGAATGGGAACTCT-CTTGATATCAAAGATCCGTGA 511
Query 471 AGAGTATCCTGATC-GAATGATGCTCACATTTTCTGTCTTCCCATCACCAAAGGTCTCGG 529
|| || || || | |||||||||||||||| ||||| |||||||| ||||||||||| |
Sbjct 512 GGAATACCCAGA-CAGAATGATGCTCACATTCTCTGTTTTCCCATCTCCAAAGGTCTCAG 570
Query 530 ACACTGTGGTTGAGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAGAATGCTG 589
|||| || |||||||| |||||||| || || ||||| || || || || ||||||||||
Sbjct 571 ACACAGTCGTTGAGCCGTACAATGCAACTCTCTCAGTCCACCAACTTGTAGAGAATGCTG 630
Query 590 ATGAGTGTATGGTTTTGGACAATGAAGCCCTTTACGACATCTGTTTTAGAACACTTAAGC 649
|||| || ||||| | ||||| ||||| |||||||| |||||||| | || || || |
Sbjct 631 ATGAATGCATGGTCCTCGACAACGAAGCTCTTTACGATATCTGTTTCCGCACTCTCAAAC 690
Query 650 TTACCACTCCTAGCTTTGGTGATC-TGAATCATC-TGATCTCTGCAACCATGAGTGGAGT 707
| | ||||||||||||||| || | |||| || | ||||||| ||||| |||||||| ||
Sbjct 691 TCAGCACTCCTAGCTTTGGAGA-CTTGAACCA-CTTGATCTCCGCAACTATGAGTGGTGT 748
Query 708 TACATGCTGTCTT-AGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGA 766
|| |||| | || || ||||| || || ||||||||||| || ||||| ||||| ||||
Sbjct 749 GACTTGCTCT-TTAAGATTCCCTGGACAACTCAACTCTGACCTTAGGAAACTCGCCGTGA 807
Query 767 ACCTTATCCCTTTCCCTCGTCTCCACTTT-TTCATGGTTGGTTTTGCCCCGCTCACTTCA 825
|||||||||| ||||||||||| || ||| |||||||||||||| ||||| ||||||||
Sbjct 808 ACCTTATCCCATTCCCTCGTCTACA-TTTCTTCATGGTTGGTTTCGCCCCTCTCACTTCC 866
Query 826 CGTGGGTCTCAGCAGTACCGT-GCACTCACCGTCCCTGAGCTCACCCAACAGATGTGGGA 884
||||| ||||| ||||| | | | ||||| ||||| ||||| || || || ||||||||
Sbjct 867 CGTGGCTCTCAACAGTA-CATCTCTCTCACAGTCCCGGAGCTGACACAGCAAATGTGGGA 925
Query 885 TTCAAAGAACATGATGTGTGCAGCAGACCCACGCCACGGGA-GGTACCTAACAGCCTCGG 943
| |||||||||||||||||||| || ||||||||| ||| | ||||| ||||| || |
Sbjct 926 CGCTAAGAACATGATGTGTGCAGCTGATCCACGCCAC-GGACGTTACCTCACAGCTTCAG 984
Query 944 CCATGTTCCGTGGCAAGATGAGCACAAAAGAAGTGGATGAGCAGATGATCAACGTACAGA 1003
|||||||||| || || ||||||||||| |||||||| || ||||| | || || ||||
Sbjct 985 CCATGTTCCGAGGAAAAATGAGCACAAAGGAAGTGGACGAACAGATCCTAAATGTCCAGA 1044
Query 1004 ACAAAAACTCTTCCTACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGCGTGTGTG 1063
|||| ||||| ||||||||||| |||||||| |||||||| |||||||| ||||| || |
Sbjct 1045 ACAAGAACTCATCCTACTTTGTTGAATGGATCCCAAACAATGTGAAGTCCAGCGTCTGCG 1104
Query 1064 ACATAGCGCC-TCGAGGTCTGTCAATGGCATCGACATTTATTGGGAATTCCACATCGATC 1122
|||| | || | || | |||||| || || ||| | || || || || ||||||
Sbjct 1105 ACATTCCACCAAC-TGGAATCAAAATGGCTTCCACGTTTGTCGGAAACTCGACTTCGATC 1163
Query 1123 CAAGAGATGTTTA-GACGGGTGAGCGAACAGTTCACTGCTATGTTCAGGAGGAAAGCTTT 1181
|| || ||||| | || | || |||||||||||||| |||||||||||| | ||||||||
Sbjct 1164 CAGGAAATGTTCAGGA-GAGTAAGCGAACAGTTCACGGCTATGTTCAGGCGTAAAGCTTT 1222
Query 1182 CTTGCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACTGAAGCTGAGAGCAA 1241
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1223 CTTGCATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAGCAA 1282
Query 1242 CATGAACGATCTCGTCTCAGAGTACCAGCAATACCAAGACGCAACTGCAGATGACGAAGG 1301
|||||| ||||| ||||| || ||||| ||||||||||| || || || ||||| ||||
Sbjct 1283 CATGAATGATCTGGTCTCTGAATACCAACAATACCAAGATGCTACCGCTGATGAAGAAGA 1342
Query 1302 TGAGTATGAAGAAGA 1316
|| ||||| |||||
Sbjct 1343 CGAATATGATGAAGA 1357
> AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:6937795-6940582
REVERSE LENGTH=1689
Length=1689
Score = 1003 bits (543), Expect = 0.0
Identities = 1080/1336 (81%), Gaps = 49/1336 (4%)
Strand=Plus/Plus
Query 1 ATGAGAGAAATCCTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTC 60
|||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 102 ATGAGAGAGATCCTTCACATTCAAGGTGGTCAATGCGGTAACCAGATTGGTTCCAAGTTC 161
Query 61 TGGGAAGTTGTATGTGATGAGCATGGGATTGA-TCCAACTGGTCGTTAC-GTTGGA-A-A 116
|||||||| | || || ||||| || || || ||| || || |||||| | |||| | |
Sbjct 162 TGGGAAGTCATCTGCGACGAGCACGGCATCGATTCC-ACCGGACGTTACAG-TGGAGACA 219
Query 117 CT-CTGATCTGCAG-TTGGAGCGTGTAAATGTTTACTATAACGAGGCATCATGCGGGAGA 174
|| | ||||| ||| || || ||| | ||||| || || || || || ||| | || |||
Sbjct 220 CTGCAGATCTCCAGCTT-GAACGTATCAATGTCTATTACAATGAAGCTTCAGGTGGAAGA 278
Query 175 TATGTTCCCCGTGCCATTCTTATGGATCTTGAGCCTGGTACTATGGACAGTGTCAGAACT 234
|| ||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||| |
Sbjct 279 TACGTTCCTCGTGCTGTTCTTATGGATCTTGAGCCTGGTACTATGGATAGTATCAGATCC 338
Query 235 GGACC-TTATGGTCAAATCTTCAGACCTGACAACTTTGT-TTTCGGGCAATCTGGTGCTG 292
||||| || |||||| |||||| | ||||| |||||||| ||| || || ||||||||||
Sbjct 339 GGACCGTT-TGGTCAGATCTTCCGTCCTGATAACTTTGTCTTT-GGTCAGTCTGGTGCTG 396
Query 293 GAAACAACTGGGCTAAAGGGCATTATACTGAAGGAGCTGAGCTTATTGATGCTGTACTCG 352
| || || ||||||||||| ||||| |||||||| ||||| |||||||||||||| || |
Sbjct 397 GTAATAATTGGGCTAAAGGTCATTACACTGAAGGTGCTGAACTTATTGATGCTGTTCTTG 456
Query 353 ATGTTGTACGCAAGGAGGCTGAGAATTGTGACTGTCTTCA-GGGTTTCCAAGTATGCCAC 411
||||||| || || || |||||||| || || || ||||| ||||||| | || |||||
Sbjct 457 ATGTTGTTCGTAAAGAAGCTGAGAACTGCGATTGCCTTCAAGGGTTTC-AGGTGTGCCAT 515
Query 412 TCGCTTGGT-GGAGGCACTGGGTCTGGAATGGGAACTCTGCTCATATCCAAGATCAGGGA 470
||| |||| |||||||| || || ||||||||||| || | ||||| |||||| | ||
Sbjct 516 TCG-TTGGGAGGAGGCACAGGTTCAGGAATGGGAACACTATTGATATCGAAGATCCGAGA 574
Query 471 AGAGTATCCTGATC-GAATGATGCTCACATTT-TCTGTCTTCCCATCACC-AAAGGTCTC 527
|||||||| || | ||||||||||||| ||| ||||| |||||||| || |||| ||||
Sbjct 575 GGAGTATCCAGA-CAGAATGATGCTCAC-TTTCTCTGTTTTCCCATCTCCTAAAG-TCTC 631
Query 528 GGACACTGTGGTTGAGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAGAATGC 587
||||| || |||||||| |||||||| || || || || |||||||| || ||||| ||
Sbjct 632 TGACACAGTCGTTGAGCCTTACAATGCAACTCTCTCTGTCCATCAGCTTGTAGAGAACGC 691
Query 588 TGATGAGTGTATGGTTTTGGACAATGAAGCCCTTTACGACATCTGTTTTAGAACACTTAA 647
|||||| || ||||| | ||||||||||| || ||||| ||||| || | || || ||
Sbjct 692 TGATGAATGCATGGTCCTCGACAATGAAGCTCTCTACGATATCTGCTTCCGTACCCTCAA 751
Query 648 GCTTACCACTCCTAGCTTTGGTGATCT-GAATCATCTGATCTCTGCAACCATGAGTGGAG 706
|| | ||||||||||||||| || || ||| ||| ||||||| ||||| ||||| || |
Sbjct 752 ACTCAGCACTCCTAGCTTTGGAGA-CTTGAACCATTTGATCTCCGCAACAATGAGCGGTG 810
Query 707 TTACATGCTGTCTTA-GGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTG 765
| || |||| |||| ||||||| || || || |||||||| || ||||| ||||| |||
Sbjct 811 TGACTTGCTC-CTTAAGGTTCCCCGGACAACTAAACTCTGACCTCAGGAAACTCGCGGTG 869
Query 766 AACCTTATCCCTTTCCCTCGTCTCCACTTT-TTCATGGTTGGTTTTGC-CCCGCTCACTT 823
||||| ||||| |||||||||||||| ||| |||||||| |||||||| ||| |||||||
Sbjct 870 AACCTAATCCCATTCCCTCGTCTCCA-TTTCTTCATGGTGGGTTTTGCGCCC-CTCACTT 927
Query 824 CACGTGGGTCTCAGCAGTAC--CGTGCACTCACCGTCCCTGAGCTCACCCAACAGATGTG 881
| ||||| || || || ||| | | |||||||||| |||||||| || ||||| |||||
Sbjct 928 CCCGTGGCTCGCAACAATACATC-T-CACTCACCGTTCCTGAGCTGACTCAACAAATGTG 985
Query 882 GGATTC-AAAGAACATGATGTGTGCAGCAGACCCACGCCACGGGAGGT-ACCTAACAGCC 939
||| || ||| ||||||||||||||||| || ||||| ||||| | || |||| ||||||
Sbjct 986 GGACTCCAAA-AACATGATGTGTGCAGCTGATCCACGTCACGG-ACGTTACCTCACAGCC 1043
Query 940 TCGGCCATGTTCCGTGG-CAAGATGAGCACAAAAGAAGTGGATGAGCAGATGATCAACGT 998
|| || || ||| | || || |||||||||||||||||| || ||||| || | ||| |
Sbjct 1044 TCTGCTATTTTCAGAGGACA-GATGAGCACAAAAGAAGTCGACGAGCAAATCCTAAACAT 1102
Query 999 ACAGAACAAAAACTCTTCCTACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGCGT 1058
||||||||| ||||| || ||||| || || ||||| |||||||||||||| || |||||
Sbjct 1103 ACAGAACAAGAACTCGTCTTACTTCGTTGAGTGGATCCCAAACAACGTGAAATCCAGCGT 1162
Query 1059 GTGTGACATAGCGCCTC-GAGGTCTGTCAATGGCATCGACATTTATTGGG-AATTCCACA 1116
||||| || | || | || || |||||| |||| ||| | ||| || || ||
Sbjct 1163 TTGTGATATCCCACCAAAGGGG-CTCAAAATGGCGGCGACGTTTGT-GGGTAACTCGACG 1220
Query 1117 TCGATCCAAGAGATGTTTAG-ACGGGTGAGCGAACAGTTCACTGCTATGTTCAGGAGGAA 1175
||||| ||||| ||||| || | | ||||| || |||||||| |||||||| ||| | ||
Sbjct 1221 TCGATTCAAGAAATGTTCAGGA-GAGTGAGTGAGCAGTTCACGGCTATGTTTAGGCGTAA 1279
Query 1176 AGC-TTTCTTGCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACTGAAGCTG 1234
||| ||||| ||||||||||||||| |||||||||||||| |||||||| || |||||||
Sbjct 1280 AGCGTTTCT-GCATTGGTACACAGGAGAAGGAATGGACGAAATGGAGTTTACGGAAGCTG 1338
Query 1235 AGAGCAACATGAACGATCTCGTCTCAGAGTACCAGCAATACCAAGACGCAACTGCAGATG 1294
||||||| ||||| ||| | ||| | || ||||| || |||||||| || ||||| ||||
Sbjct 1339 AGAGCAATATGAATGATTTGGTCGCTGAATACCAACAGTACCAAGATGCTACTGCTGATG 1398
Query 1295 ACGAAGGTGAGTATGA 1310
| ||||||||||||||
Sbjct 1399 AGGAAGGTGAGTATGA 1414
> AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182092-11184072
FORWARD LENGTH=1693
Length=1693
Score = 981 bits (531), Expect = 0.0
Identities = 1086/1352 (80%), Gaps = 45/1352 (3%)
Strand=Plus/Plus
Query 1 ATGAGAGAAATCCTTCACATTCAAGGTGGTCAATGTGGGAACCAGATTGGTTCCAAGTTC 60
||||||||||| ||||| |||||||| ||||| || || |||||||| || | ||||||
Sbjct 127 ATGAGAGAAATTCTTCATATTCAAGGAGGTCAGTGCGGAAACCAGATCGGAGCTAAGTTC 186
Query 61 TGGGAAGTTGTATGTGATGAGCATGGGATTGATCCAACTGGTC-GTTACGTTGGAAACT- 118
||||||||| | || | ||||| || ||||||| ||| |||| || | | ||| | |
Sbjct 187 TGGGAAGTTATTTGCGGCGAGCACGGTATTGATCAAACCGGTCAGTCATG-TGGCGA-TA 244
Query 119 CTGATCTGCAG-TTGGAGCGTG-TAAATGTTTACTATAACGAGGCATCATGC-G-GG-AG 173
| ||||| ||| || || | | | ||||| || | |||||| || | | || | || |
Sbjct 245 CAGATCTACAGCTT-GAAAG-GATCAATGTCTATTTTAACGAAGC-T-A-GCGGAGGCAA 299
Query 174 ATATGTTCCCCGTGCCATTCTTATGGATCTTGAGCCTGGTACTATGGACAGTGTCAGAAC 233
||| ||||| ||||| ||||||||||||| |||||||| |||||||| | ||||| |
Sbjct 300 ATACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGATC 359
Query 234 TGGACC-TTATGGTCAAATCTTCAGACCTGACAACTTTGTTTTCGGGCAATCTGGTGCTG 292
||| || || |||||| || ||| | ||||| ||||| ||||| || || ||||||||||
Sbjct 360 TGGGCCGTT-TGGTCAGATTTTCCGGCCTGATAACTTCGTTTTTGGTCAGTCTGGTGCTG 418
Query 293 GAAACAACTGGGCTAAAGGGCATTATACTGAAGGAGCTGAGCTT-ATTGATGCTGTACTC 351
| || |||||||| ||||| ||||| || || ||||||||| || |||||| |||| ||
Sbjct 419 GGAATAACTGGGCGAAAGGTCATTACACGGAGGGAGCTGAG-TTGATTGATTCTGTGCTT 477
Query 352 GATGTTGT-ACGCAAGGAGGCTGAGAATTGTGACTGTCTTCAGGGTTTCCAAGTATGCCA 410
|||||||| | | ||||| |||||||| ||||| |||||||| ||||| ||||| || ||
Sbjct 478 GATGTTGTGA-GGAAGGAAGCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCA 536
Query 411 CTCGCTT-GGTGGAGGCACTGGGTCTGGAATGGGAACTCTGCTCATATCCAAGATCAGGG 469
|| || || ||||| ||||| |||||||||||||| || || || || ||||| || |
Sbjct 537 TTC-TTTGGGAGGAGGAACTGGTTCTGGAATGGGAACACTTCTTATTTCTAAGATTAGAG 595
Query 470 AAGAGTATCCTGATCGAATGATGCTCACATTTTCTGTCTTCCCATCACCAAAGGTCTCGG 529
| || ||||| ||||| |||||| | || ||||| ||||||||||| || |||||||| |
Sbjct 596 AGGAATATCCAGATCGTATGATGATGACCTTTTCGGTCTTCCCATCTCCTAAGGTCTCTG 655
Query 530 ACACTGTGGTTGAGCCATACAATGCGACACTTTCAGTTCATCAGCTGGTGGAGAATGCTG 589
| || || ||||||||||||||||| || ||||| ||||| ||||| || ||||||||||
Sbjct 656 ATACAGTTGTTGAGCCATACAATGCTACTCTTTCCGTTCACCAGCTCGTTGAGAATGCTG 715
Query 590 ATGAGTGTATGGTTTTGGACAATGAAGCCCTTTACGACATCTGTTTTAGAACACTT-AAG 648
|||| |||||||||||||| || ||||| |||||||| |||||||| | || ||| |||
Sbjct 716 ATGAATGTATGGTTTTGGATAACGAAGCTCTTTACGATATCTGTTTCCGTAC-CTTGAAG 774
Query 649 CTTACCACTCCTAGC-TTTGGTGATCTGAATCATCTGATCTCTGCAACCATGAGTGGAGT 707
||| | | ||||| | |||||||| || || ||||| ||||| || || |||||||| ||
Sbjct 775 CTTGCTAATCCTA-CATTTGGTGACCTTAACCATCTCATCTCAGCTACAATGAGTGGTGT 833
Query 708 TACATGCTGTCTTAGGTTCCCGGGTCAGCTCAACTCTGATCTGAGGAAGCTCGCAGTGAA 767
||||||||||||| ||||||| ||||| || |||||||| || || || || || |||||
Sbjct 834 TACATGCTGTCTTCGGTTCCCTGGTCAACTAAACTCTGACCTTAGAAAACTTGCTGTGAA 893
Query 768 CCTTATCCCTTTCCCTCGTCTCCACTTTTTCATGGTTGGTTTTGCCCCGCTCACTTCACG 827
|||||| |||||||| || |||||||| ||||||||||||||||| || | || ||| |
Sbjct 894 CCTTATTCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCTTTGACATCAAG 953
Query 828 TGGGTCTCAGCAGTACCGTGCAC-TCACCGTCCCTGAGCTCACCCAACAGATGTGGGAT- 885
|| ||||| || ||| |||| | | | ||||||||||| || |||||||||||||||
Sbjct 954 AGGATCTCAACAATACAGTGC-CTTGAGTGTCCCTGAGCTAACTCAACAGATGTGGGATG 1012
Query 886 TCAAAGAACATGATGTGTGCAGCAGACCCACGCCACGGGAGGTACCTAACAGCCTCGGCC 945
|||| ||||||||||||||||| || || || || || | ||| | ||||| || ||
Sbjct 1013 CCAAA-AACATGATGTGTGCAGCTGATCCTCGTCATGGTCGTTACTTGACAGCTTCTGCT 1071
Query 946 ATGTTCCGTGGCAAGATGAGCACAAAAGAAGTGGATGAGCAGATGATCAACGTACAGAAC 1005
| |||||||| |||||||| || ||||| || ||||| |||||||| ||||| ||||||
Sbjct 1072 GTCTTCCGTGGAAAGATGAGTACCAAAGAGGTTGATGAACAGATGATGAACGTCCAGAAC 1131
Query 1006 AAAAACTCTTCCTACTTTGTGGAATGGATTCCAAACAACGTGAAGTCAAGCGTGTGTGAC 1065
|||||||| || |||||||| |||||||||||||| |||||||| |||||||| || ||
Sbjct 1132 AAAAACTCCTCATACTTTGTTGAATGGATTCCAAATAACGTGAAATCAAGCGTCTGCGAT 1191
Query 1066 ATAGC-GCCTCGAGGTCTGTCAATGGCATCGACATTT-ATTGGGAATTCCACATCGATCC 1123
||||| || | ||| || ||||||||| || ||| ||||| || || || || ||||
Sbjct 1192 ATAGCTCCCAC-TGGTTTGAAAATGGCATCAAC-TTTCATTGGAAACTCAACTTCAATCC 1249
Query 1124 AAGAGATGTTTAGACGGGTGAGCGAACAGTTCACTGCTATGTTCAGGAGGAAA-GCTTT- 1181
| || ||||| || || ||||| |||||||||||||| |||||||||| |||| |||||
Sbjct 1250 AGGAAATGTTCAGGCGTGTGAGTGAACAGTTCACTGCCATGTTCAGGA-GAAAGGCTTTC 1308
Query 1182 CTTGCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACTGAAGCTGAGAGCAA 1241
||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1309 CTT-CATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAGTAA 1367
Query 1242 CATGAACGATCTCGTCT-CAGAGTACCAGCAATACCAAGACGCAACTG-CAGATGACGAA 1299
|||||| ||||| || | ||||||| |||||||| ||||| || || | | | ||| ||
Sbjct 1368 CATGAATGATCTTGT-TGCAGAGTATCAGCAATATCAAGATGCTACAGTCGG-TGAAGA- 1424
Query 1300 GGTGAGTATGAAGAAGACGAGGATGAAGAAGA 1331
|| |||| || || ||||| || ||||||||
Sbjct 1425 GG--AGTACGAGGAGGACGAAGAAGAAGAAGA 1454
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66465521580
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5