BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg893175 Length=873 Score E Sequences producing significant alignments: (Bits) Value AT5G12460.1 | Symbols: | Protein of unknown function (DUF604) ... 1332 0.0 > AT5G12460.1 | Symbols: | Protein of unknown function (DUF604) | chr5:4043057-4044583 FORWARD LENGTH=1326 Length=1326 Score = 1332 bits (721), Expect = 0.0 Identities = 825/874 (94%), Gaps = 11/874 (1%) Strand=Plus/Plus Query 4 ATGACCCATAAACTCTTTGCGCCTCTTGACCTTACTTTCTCCTCCTCTTCATCATCTTCC 63 ||||||||||| || ||||||||||||||||||| |||||||||||||||||| || ||| Sbjct 1 ATGACCCATAACCTTTTTGCGCCTCTTGACCTTAGTTTCTCCTCCTCTTCATCTTCCTCC 60 Query 64 TCGTCTTCAGTATCATTGTCCTTGCAAATTACAAGAGAGTCTCCTACAAATATCAGCCAT 123 || || ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct 61 TCCTCGTCAGTATCATTGTCCTTGCAAATAACAAGAGAGCCTCCAACAAATATCAGCCAT 120 Query 124 CTATTTTTTGTCATTGTTGGTAGTACAAAGACTTGGAGATATAGGAGAGGCTACATAGAG 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTATTTTTTGTCATTGTTGGTAGTACAAAGACTTGGAGATATAGGAGAGGCTACATAGAG 180 Query 184 CCTTGGTGGAGACCAAACATCACAAAAGGATATGTTTTCCTCGAAAGACCACCTGGCCGT 243 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | Sbjct 181 CCTTGGTGGAGACCAAACATTACAAAAGGATATGTCTTCCTCGAAAGACCACCTGGCCCT 240 Query 244 GATCTCTTGCCTTGGCCT-AACCAATCTCCTCCCTTTTCTGTCAACAAAGAATCATTCAT 302 |||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct 241 GATCTCTTGCCTTGGCCTCAA-CAATCTCCTCCCTTCTCTGTCAACAAAGAGTCATTCAT 299 Query 303 CACAAACAAATTCAAGACTCAGATCCGCCTTTTTTATTCGCTTCTTGAGTCTTTTAAGAA 362 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 300 CACAAACAAATTCAAGACTCAGATCCGCCTTTTTTATTCGCTTCAAGAGTCTTTTAAGAA 359 Query 363 GGCTTCCAAAGAGACAAGATGGTTTGTGATAGCAGATGATGATACTCTCTTCTTCTTGGA 422 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 360 GGCGTCCAAAGAGACAAGATGGTTTGTGATAGGAGATGATGATACTCTCTTCTTCTTGGA 419 Query 423 CAATTTGGTCAAAGCTCTTGACAGGTATGACCACAAGAAGCACTATTACATCGGAATGAA 482 ||||||||| |||||||| ||| | ||| |||||||||||||||||||| |||||||||| Sbjct 420 CAATTTGGTGAAAGCTCTCGACCGATATAACCACAAGAAGCACTATTACGTCGGAATGAA 479 Query 483 CTCGGAAAACGTTTGGTCCAACGCGATTTTCGCTTTCGACATGGGATATGGAGGCGGCGG 542 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 480 CTCCGAAAACGTTTGGTCCAACGCGATTTTCGCTTTTGACATGGGATATGGAGGCGGCGG 539 Query 543 ATACGCATTGAGCTATCCAACCGTAGTAACACTTCTCAGCAACATGGAAGAATGTATCAA 602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 ATACGCATTGAGCTATCCAACCGTAGTAACACTTCTCAGCAACATGGAAGAATGTATCAA 599 Query 603 AAGATACCTTGGAGTTTACAGCGATCTTCTCTCATTTCGTTGCTTGGCCGACTTGGGAAT 662 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 AAGATACCTTGGAGTTTACAGCGATCTTCTCTCATTTCGTTGCTTGGCCGACTTGGGAAT 659 Query 663 TGATCTTACTTTAGAGAAAGGAATGCACCAGATTGATCTACACGGTGACATATCAGGTCT 722 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 660 TGATCTTACTTTAGAGAAAGGCATGCACCAGAATGATCTACACGGTGACATATCAGGTCT 719 Query 723 CTTATCAGCTCATCCACAGTCTCCTCTTATCAGCCTTCACCATTTCGATGTCATAGACCC 782 |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| Sbjct 720 GTTATCAGCTCATCCTCAGTCTCCTCTTATCAGCCTCCACCATTTCGATGTAATAGACCC 779 Query 783 GATTTTTCCAGGCATGACCCGCCAGCAATCCGTGAACCACCTCATGAAAAC-G-GAT--C 838 ||| || |||||||||| |||||||||||||||||||||||||||| |||| | || | Sbjct 780 GATATTCCCAGGCATGAACCGCCAGCAATCCGTGAACCACCTCATGGAAACCGCGAAAAC 839 Query 839 --A---GTCCCGTGTCTTGCAACAAACAATATGT 867 | |||||||||||||||||||||||||||| Sbjct 840 CGACCAGTCCCGTGTCTTGCAACAAACAATATGT 873 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42598556656 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5