BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg893177 Length=966 Score E Sequences producing significant alignments: (Bits) Value AT5G13520.1 | Symbols: | peptidase M1 family protein | chr5:43... 1485 0.0 AT5G10240.1 | Symbols: ASN3 | asparagine synthetase 3 | chr5:32... 126 3e-28 > AT5G13520.1 | Symbols: | peptidase M1 family protein | chr5:4341948-4344671 REVERSE LENGTH=2120 Length=2120 Score = 1485 bits (804), Expect = 0.0 Identities = 868/900 (96%), Gaps = 0/900 (0%) Strand=Plus/Plus Query 3 GCAAGGGGAGGAGCTCTTTGGAGATTACGAGTGGGAGAGGTTTGACTTACTGGTGCTACC 62 |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||| || Sbjct 868 GCAAGGGGAGAAGCTGTTTGGAGATTACGAGTGGGAGAGATTTGACTTACTGGTGCTGCC 927 Query 63 TCCGAGTTTTCCTTATGGAGGTATGGAGAATCCAAGAATGGTTTTCCTGACGCCTACTGT 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 928 TCCGAGTTTTCCTTATGGAGGTATGGAGAATCCAAGAATGGTTTTCCTGACGCCTACTGT 987 Query 123 TATCAGAGGAGACGCCACTGGAGCTCAAGTTGTAGCTCACGAGCTCGCACATAGCTGGAC 182 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 988 TATCAAAGGAGACGCCACTGGAGCTCAAGTTGTAGCTCACGAGCTCGCACATAGCTGGAC 1047 Query 183 TGGGAATTTGATCACTAACATCAACAACGAACATTTCTGGTTGAATGAGGGATTTACAAC 242 |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct 1048 TGGGAATTTGATCACTAATATCAACAATGAACACTTCTGGTTGAATGAGGGATTTACAAC 1107 Query 243 TTACGCAGAGAGGAGAATTGTGGAAGTTGTCCAAGGGGCGGATAGAGCTACTCTGAATAT 302 |||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||| || Sbjct 1108 TTACGCAGAGAGGAGAATTGTGGAGGTTGTTCAAGGGGCGGATATAGCTACTTTGAACAT 1167 Query 303 TGGCATTGGTTGGAGGGGTTTAACTGATGAAATGGAACGGTTTAAGGACAACTTGGAGTG 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1168 TGGCATTGGTTGGAGGGGTTTAACTGATGAAATGGAACGGTTTAAGGACAACTTGGAGTG 1227 Query 363 CACTAAACTGTGGAACAAACAAGAAGGTGTTGATCCAGATGATGTATATTCTCAGGTCCC 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1228 CACTAAACTGTGGAACAAACAAGAAGGTGTTGATCCAGATGATGTATATTCTCAGGTCCC 1287 Query 423 ATATGAAAAAGGATTCCAATTTGTGTTGCGAATTGAGCGCCAGATTGGAAGGACTGCATT 482 |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct 1288 ATATGAAAAAGGATTCCAATTTGTGTTGCGAATTGAACGCCAGATTGGAAGAACTGCTTT 1347 Query 483 TGACGAATTCCTCAAGATATACATTGCTACTTTCAAGTTCAAGTCAATCGATGCAAACAC 542 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 1348 TGACGAATTCCTCAAGAAATACATTGCTACTTTCAAGTTCAAGTCAATCGATACAAACAC 1407 Query 543 ATTTCTTGAATTCCTGAAAGCAAACATCCCTGGCATAGAGAAAGAGATCAACCTACAGCT 602 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1408 ATTTCTTGAATTCCTGAAAGCAAACATCCCTGGCATAGAGAAAGAGATCAATCTACAGCT 1467 Query 603 GTGGACTGAGGGCGTTGGTATACCTGAGGATGCATATGAACTGGCCTCAACCATTTACAC 662 |||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||| Sbjct 1468 GTGGACTGAGGGCGTTGGTATACCAGAGGATGCATATGAACCAGTCTCAACCATTTACAC 1527 Query 663 AAAGATCATATCCCTGGCAAAAGAGTTTAAGGAAGGAAGGATGCCAGGTGAGGATGATGG 722 |||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||| Sbjct 1528 AAAGATCATATCCCTGGCGAAAGAGTTTAAGGAAGGAAAGATGCCAAGTGAGGATGATGT 1587 Query 723 TGCTGAGTGGAACGGACAGGAATGGGAGCTGTACTTGGAGAATCTTACTAAATCATGTGA 782 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1588 TGCTGAGTGGAACGGACAGGAATGGGAGCTGTACTTGGAGAATCTTCCTAAATCATGTGA 1647 Query 783 ACCTTCTCAGGTCATGGCCTTGGACAAGCGGTACAGACTAGCAGAATCGAAGGACTATGA 842 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1648 ACCTTCTCAGGTCATGGCCTTGGACAAGCGGTACAGACTGGCAGAATCGAAAGACTATGA 1707 Query 843 AGTGAAGGTCTCGTTTCTGCAGCTTGCAGTCGCATCCAAGTGCAGAGAGTACCATGGGGA 902 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 1708 AGTGAAGGTCTCGTTTCTGCAACTTGCAGTCACATCCAAGTGCAGAGAGTACCATGGGGA 1767 > AT5G10240.1 | Symbols: ASN3 | asparagine synthetase 3 | chr5:3212689-3216466 REVERSE LENGTH=2030 Length=2030 Score = 126 bits (68), Expect = 3e-28 Identities = 70/71 (99%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 896 ATGGGGAGGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGAGAAGA 955 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1709 ATGGGGAAGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGAGAAGA 1768 Query 956 CTCCAGCCATT 966 ||||||||||| Sbjct 1769 CTCCAGCCATT 1779 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47270332327 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5