BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg893283 Length=375 Score E Sequences producing significant alignments: (Bits) Value AT5G13825.1 | Symbols: | unknown protein; Has 30201 Blast hits... 560 3e-159 > AT5G13825.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:4464967-4466052 REVERSE LENGTH=590 Length=590 Score = 560 bits (303), Expect = 3e-159 Identities = 353/377 (94%), Gaps = 4/377 (1%) Strand=Plus/Plus Query 1 ATGGAGGCTGAATCTACTAGTTCTGGACATCGACGACAGAAACGTCCACGGCAGAGGCGA 60 |||||||||||||||| ||||||||||||||||||||||||||||||||| || | | || Sbjct 84 ATGGAGGCTGAATCTAGTAGTTCTGGACATCGACGACAGAAACGTCCACGACAAAAGAGA 143 Query 61 TCGTCGGAGGTGATCAGTTATGAGAACAGCGTTGCAAATCTGTCAAAG-GAAGGTAAAGA 119 || ||||| |||||||||||||||| |||||||||||||||||| ||| ||||| ||||| Sbjct 144 TCATCGGATGTGATCAGTTATGAGAGCAGCGTTGCAAATCTGTC-AAGAGAAGGGAAAGA 202 Query 120 GACGTTGATGATTGTGAGTCGCAGAAGGCAACTGAATAAAATCCCCAATACGTCTTGTAC 179 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| Sbjct 203 GACGTTGATGATTGTGAGTCGCAGAAGACAATTGAATAAAATCCCCAATACGTCTTCTAC 262 Query 180 TGTGTTTGATAATACATGTCCTCGTTACAACTGGCTTCGTTCTGGTTGGATCGCTGAGGA 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 263 TGTGTTTGATAATACATGTCCTCGTTACAACTGGCTTCGTTCTGGTTGGATCGCTGAGGA 322 Query 240 GCGTCTTAAGCCCCATGACCGACTCTACCGGTATTTTTACGATCCATTAGGGCAAATGTA 299 |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 323 GCGTCTTAAGGTCTATGACCGACTCTACCGGTATTTTTATGATCCATTAGGGCAAATGTA 382 Query 300 TGGTACTCGGGGAGAAGTGGATCAAATCTATGCAGATATTGAAAAATCGCGCGCAATAGT 359 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 383 TCATACTCGTGGAGAAGTGGATCAAATCTATGCAGATATTGAAAAATCGCGCGCAATAGT 442 Query 360 CGTTTTC-GACAAGTAA 375 ||| ||| || |||||| Sbjct 443 CGTCTTCCGA-AAGTAA 458 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17643979899 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5