BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893333
Length=1662
Score E
Sequences producing significant alignments: (Bits) Value
AT5G14280.1 | Symbols: | DNA-binding storekeeper protein-relat... 2102 0.0
AT2G25650.1 | Symbols: | DNA-binding storekeeper protein-relat... 281 1e-74
AT4G00270.1 | Symbols: | DNA-binding storekeeper protein-relat... 276 6e-73
> AT5G14280.1 | Symbols: | DNA-binding storekeeper protein-related
| chr5:4609123-4611444 FORWARD LENGTH=1719
Length=1719
Score = 2102 bits (1138), Expect = 0.0
Identities = 1535/1715 (90%), Gaps = 73/1715 (4%)
Strand=Plus/Plus
Query 1 ATGGCGACTCCAACGGAGCTAGATTTCTCTTCACC---TGGTGGTGCTG--G----TGAC 51
||||||||||| |||||||||| |||||||||||| |||||||| || | ||||
Sbjct 1 ATGGCGACTCCGACGGAGCTAGGTTTCTCTTCACCTGGTGGTGGTGGTGACGACTCTGAC 60
Query 52 GATAACACTCCACGGAAGCGTACTTCAAAACGCACTGCTTCCGAAACAGTAAC------A 105
|||||| |||||| |||||||||||||||||| |||||||||||||||| ||| |
Sbjct 61 GATAACCCTCCACAGAAGCGTACTTCAAAACGTACTGCTTCCGAAACAGCAACAGAAGAA 120
Query 106 G---C--AGAAG-AG--ACA-AAG-A-A-GAAG----A-AC-AAATTGGCTTCTCCGATG 147
| | ||||| || | | ||| | | |||| | || ||| |||||||||| |
Sbjct 121 GAAACGAAGAAGAAGAAAAAGAAGAAGACGAAGCACAACACAAAAATGGCTTCTCCTCCG 180
Query 148 AGTAACCGGATCTGGAACGAGGAAGATGAGCTCTCTATCTTAAAGGGATTATTGGATTTT 207
|| ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct 181 AGCAACCGGATCTGGAACGAAGAAGACGAGCTCTCTATCTTAAAGGGATTGGTGGATTTT 240
Query 208 CGAGCTAAGACAGGGCTCGAATCCAAAATTGATTGGGAAGCGTTTTATGGTTTCGTCAGA 267
|||||||| ||||| ||||||||||||||||||||||| ||||||||| ||| ||||| |
Sbjct 241 CGAGCTAAAACAGGACTCGAATCCAAAATTGATTGGGATGCGTTTTATTGTTACGTCAAA 300
Query 268 GGTTCCATTCATGTGCAAGTCTCTAAG-GATCAGGTGT-TGAATAAGACCAAGAAGTTGA 325
||||||||||||||| |||| || ||| | ||| | | ||| |||||||| ||||||||
Sbjct 301 GGTTCCATTCATGTGAAAGTTTCCAAGTG-CCAGCT-TATGAGTAAGACCAGGAAGTTGA 358
Query 326 AGAAGAAGTTCCTTGATCATATGGAGAAAATCAATCAAGGAATTGATCCGCATTTTACTA 385
||||||||||||||||||| |||||||||||| ||||||||| |||||| ||||||||||
Sbjct 359 AGAAGAAGTTCCTTGATCAAATGGAGAAAATCGATCAAGGAAATGATCCACATTTTACTA 418
Query 386 GGTCTATTGACTCTGAAGCCTTTGGATTTTCCATGATGATTTGGGGCAAAAATGATGCTG 445
|||||| ||| ||||||| ||||||| |||||||||||||||| | |||| ||||||||
Sbjct 419 GGTCTAGTGAAACTGAAGCTTTTGGATATTCCATGATGATTTGGCGTAAAATTGATGCTG 478
Query 446 AATACACTAATGGTGCTATGGATAAAACATATCAAAACAAGAGT-GACGAGGAGATGTTT 504
||||||||||||||| |||||||||| || |||||| | ||||| || |||||| |||||
Sbjct 479 AATACACTAATGGTGTTATGGATAAAGCACATCAAAGCGAGAGTGGA-GAGGAGGTGTTT 537
Query 505 AAGAAGGACGAGGAAGTGGCCTTAATCGACAATGGGGCTGGGAAAAGTGACTTTGATGGC 564
|| |||| ||||||||||||||||| ||||| ||||||| | ||| | | ||||
Sbjct 538 GAGGAGGATGAGGAAGTGGCCTTAATTGACAAAGGGGCTGCG-AAA---A----G-TGGC 588
Query 565 AAATCACCACCTCTTAAAGC---CGTTGTTGTTGACAAAATAACTAC---CAAGAACGGG 618
|| | |||||| | |||| ||||||||||||||||||||||| |||||||||
Sbjct 589 AAGT---CACCTCATGAAGCTGTTGTTGTTGTTGACAAAATAACTACGAAGAAGAACGGG 645
Query 619 ACTGCTGG--AA-A-A--GA-G--G--G-TGATGATGTGTTGTGCGCTGTGCGGGATGCA 666
|||||||| || | | || | | | ||||||||||||||| ||||||||||||||
Sbjct 646 ACTGCTGGAAAAGAGAGTGATGATGATGATGATGATGTGTTGTGTGCTGTGCGGGATGCG 705
Query 667 TTTGAGAACACCATGGTGTCGCAAGGTTTAAGTGATTATCAAAAGAAGTTGCAGCTTGAG 726
||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 706 TTTGAGACCACCATGATGTCGCAAGGATTAAGTGATTATCAAAAGAAGTTGCAGCTTGAG 765
Query 727 AAGCTGATGAACCTTGGAACTGGTAAAAGAAGAGAGTTGAGCAACGAATGGAAAGCACTA 786
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 766 AAGCTGATGAACCTTGGAACTGGTAAAAGAAGAGAGTTGAGCAATGAATGGAAAGCACTA 825
Query 787 TGTGTTGAGGAATTAAAATTGAATATCAAGAAGCTTCGATTTTCCGCCAAGCTTGCAGAG 846
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 826 TGTGTTGAGGAACTAAAATTGAATATCAACAAGCTTCGATTTTCCGCCAAGCTTGCAGAG 885
Query 847 GCAGCAAATGATGATGATAAATATTCTTCTTCTTCTTCCATTGTCGT-TAGGGTTGAGAT 905
||||||||||||||| || | |||||||||||||||||||||| | | ||||||||||
Sbjct 886 GCAGCAAATGATGATTATTCTTCTTCTTCTTCTTCTTCCATTGTC-TCTTGGGTTGAGAT 944
Query 906 TCCGATCTCAATGTCGATCACTATCGGAGAATTCTCCATTCCAGACCTCCCTCTCTTCTT 965
|||||||||||||||||||| |||||||||| |||| ||||||||||| ||| |||||||
Sbjct 945 TCCGATCTCAATGTCGATCAATATCGGAGAAATCTCAATTCCAGACCTTCCTATCTTCTT 1004
Query 966 CTCCATGTTCTTAACCATCTACCTAATCGCTTACTTCATCGTCTTCCGCAATTGGAAACC 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1005 CTCCATGTTCTTAACCATCTACCTAATCGCTTACTTCATCGTCTTCCGCAATTGGAAACC 1064
Query 1026 ACAAATCCGTCCCGAAGCTTCAAGCTGCCTGATCTCAATCTTCCACGGCA-CTCCGGCGG 1084
||||||||||||||||||||||||||||||||||||||||||||| || | |||| ||||
Sbjct 1065 ACAAATCCGTCCCGAAGCTTCAAGCTGCCTGATCTCAATCTTCCATGG-ATCTCCAGCGG 1123
Query 1085 TTCTCCTCGCCACACGCGCCGTCTTCTCCTCCTCCGCACGCTCCTTCGCCTCCGCAAACA 1144
|| |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||
Sbjct 1124 TTTTCCTCGCCACACGCGCAGTTTTCTCCTCCTCCGAACGCTCCTTCGCCTCCGCAAACA 1183
Query 1145 CCGCCGCTCAAAACACCGTCCTCGATTTCAGCGTCGCTTACTTCCTCACCGATCTCTTCC 1204
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184 CCGCCGCACAAAACACCGTCCTCGATTTCAGCGTCGCTTACTTCCTCACCGATCTCTTCC 1243
Query 1205 ACTACATCGTCTTCAACCCTAACGACGTCCTCTTCATCGGCCATCACCTAGCCACTCTAT 1264
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 1244 ACTACATCGTCTTCAACCCTAACGACGTACTCTTCATCGGCCATCACGTAGCCACTCTAT 1303
Query 1265 TCGTCTTCCTAACCTGCAGATTCCTCGTCTTCCACGGCGCCTGCGCCATCTTAGGCCTCC 1324
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1304 TCGTCTTCCTAACCTGCAGATTCCTCGTCTTCCACGGGGCTTGCGCCATCTTAGGCCTCC 1363
Query 1325 TGATTCTAGCCGAAGTCACAAGCGCGTGTCAGAACGCGTGGACGCTCGCCGGAGCAAGGA 1384
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364 TGATTCTAGCTGAAGTAACAAGCGCGTGTCAGAACGCGTGGACGCTCGCCGGAGCAAGGA 1423
Query 1385 AGAATGATCCGGAATCGCGATTAGCCGTAAAAGTGTACGATCTCTTGTCCCCTCCGTTTT 1444
|||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||||
Sbjct 1424 AGAATGATCCGGAATCACGATTAGCTGTGAAAGTGTACGATCTCTTGTCTCCTCCGTTTT 1483
Query 1445 ACGCCTTCTACAGTATCGTTAGGGGAGTGTTGGGACCTTTGTTTTTCGGGAAAATGGTTG 1504
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1484 ACGCCTTCTACAGTATCGTTAGGGGTGTGTTGGGACCTTTGTTTTTCGGGAAAATGGTAG 1543
Query 1505 CGTTTTACGCTCGAGGCGGTGCTCATGGTGTGATTCCTAATTGGTTGTGGATTTCTTGGG 1564
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1544 CGTTTTACGCTCGAGGTGGTGCTCATGGTGTGATACCTAATTGGTTGTGGATTTCTTGGG 1603
Query 1565 CTATTGTTGTTGGAACTGCTATTACGGTTAGTATACTTTGGATTTGGAATCTCTGGATAG 1624
| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1604 CAATTGTTGTTGGAATTGCTATTACTGTTAGTATACTTTGGATTTGGAATCTCTGGATAG 1663
Query 1625 AATTGTTTAGACAAAGGAAGGCTAAGAAAATTAGA 1659
|||||||||| ||||||| ||||| ||||| |||
Sbjct 1664 AATTGTTTAGTGAAAGGAAAGCTAACAAAATCAGA 1698
> AT2G25650.1 | Symbols: | DNA-binding storekeeper protein-related
transcriptional regulator | chr2:10914586-10916216 FORWARD
LENGTH=1550
Length=1550
Score = 281 bits (152), Expect = 1e-74
Identities = 200/223 (90%), Gaps = 3/223 (1%)
Strand=Plus/Plus
Query 636 TGATGATGTGTTGTGCGCTGTGCGGGATGCATTTGAGAACACCATGGTGTCGCAAGGTTT 695
|||||||| ||| |||||||||| ||||||||||||| | | |||||||||||||
Sbjct 1115 TGATGATGAGTTATGCGCTGTGCAGGATGCATTTGAG---GCTGTAATGTCGCAAGGTTT 1171
Query 696 AAGTGATTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATGAACCTTGGAACTGGTAAAAG 755
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1172 AAGTGGTTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATGAACCTTGGAACTGGAAAAAG 1231
Query 756 AAGAGAGTTGAGCAACGAATGGAAAGCACTATGTGTTGAGGAATTAAAATTGAATATCAA 815
|||||||||||| | ||||||||||| |||||||||||||| || ||||||||||||
Sbjct 1232 AAGAGAGTTGAGTGATGAATGGAAAGCGTTATGTGTTGAGGAAAGAAGATTGAATATCAA 1291
Query 816 GAAGCTTCGATTTTCCGCCAAGCTTGCAGAGGCAGCAAATGAT 858
||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 1292 GAAGCTTAGATTTTCCGCCAAGCTTGCAGAGGCAGCTAATGAT 1334
Score = 265 bits (143), Expect = 1e-69
Identities = 270/328 (82%), Gaps = 21/328 (6%)
Strand=Plus/Plus
Query 118 AAGAAGAAGAACAAATTGGCTTCTCCGATGAGT-AACCGGATCTGGAACGAGGAAGATGA 176
||||||||||| || |||| | | ||| ||| | ||||||||||||||||||||||||
Sbjct 342 AAGAAGAAGAAGAATTTGGGTCCGCCGTTGA-TCGTCCGGATCTGGAACGAGGAAGATGA 400
Query 177 GCTCTCTATCTTAAAGGGATTA-TTGGATTTTC-GAGCTAAGACAGGGCTCGAATCC-AA 233
|||||||||||||||||||||| ||| ||| | ||||||||||||| || ||||| ||
Sbjct 401 GCTCTCTATCTTAAAGGGATTAGTTG-ATTA-CAGAGCTAAGACAGGATTC-AATCCCAA 457
Query 234 AATTGATTGGGAAGCGTTTTATGGTTTCGTCAGAGGTTCCATTCATGTGC-AAGT-CTCT 291
|||||||||||| |||||||| ||||| || || |||| || | | ||| || | |||
Sbjct 458 AATTGATTGGGATGCGTTTTACAGTTTCCTCGGAAGTTCTAT-CGT-TGCGAAATTCTCC 515
Query 292 AAGGATCAGGTGTTGAATAAGACCAAGAAGTTGAAGAAGAAG-TTCCTTGATCATATGG- 349
||||| ||||| |||| ||||| || ||||||||| ||| || || | || |||| |||
Sbjct 516 AAGGAGCAGGTTTTGAGTAAGATCAGGAAGTTGAA-AAGGAGATTTCATGTTCAT-TGGG 573
Query 350 AGAAAATCAATCAAGG-AATTGATCCGCATTTTACTAGGTCTATTGACTCTGAAGCCTTT 408
||||||||| | |||| ||| |||||| | ||||||||||||| ||| ||||||||||||
Sbjct 574 AGAAAATCAGTGAAGGGAAT-GATCCGAAATTTACTAGGTCTAGTGATTCTGAAGCCTTT 632
Query 409 GGATTTTCCAT-GATGATTTGGGG-CAA 434
|||||||| | |||||||||||| |||
Sbjct 633 GGATTTTCT-TCGATGATTTGGGGACAA 659
> AT4G00270.1 | Symbols: | DNA-binding storekeeper protein-related
transcriptional regulator | chr4:117152-118577 REVERSE
LENGTH=1343
Length=1343
Score = 276 bits (149), Expect = 6e-73
Identities = 199/223 (89%), Gaps = 3/223 (1%)
Strand=Plus/Plus
Query 636 TGATGATGTGTTGTGCGCTGTGCGGGATGCATTTGAGAACACCATGGTGTCGCAAGGTTT 695
|||||||| ||| ||||| |||| ||||||||||||| | || |||||||||||||
Sbjct 793 TGATGATGAGTTATGCGCGGTGCAGGATGCATTTGAG---GCGGTGATGTCGCAAGGTTT 849
Query 696 AAGTGATTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATGAACCTTGGAACTGGTAAAAG 755
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 850 AAGTGGTTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATGAACCTTGGAAATGGTAAAAG 909
Query 756 AAGAGAGTTGAGCAACGAATGGAAAGCACTATGTGTTGAGGAATTAAAATTGAATATCAA 815
|||||||||||| | ||||||||||| |||||||||||||| || ||| ||||||||
Sbjct 910 AAGAGAGTTGAGTGATGAATGGAAAGCGTTATGTGTTGAGGAAACAAGATTCAATATCAA 969
Query 816 GAAGCTTCGATTTTCCGCCAAGCTTGCAGAGGCAGCAAATGAT 858
||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 970 GAAGCTTAGATTTTCCGCCAAGCTTGCAGAGGCAGCTAATGAT 1012
Score = 255 bits (138), Expect = 7e-67
Identities = 278/341 (82%), Gaps = 28/341 (8%)
Strand=Plus/Plus
Query 109 GAAGA-GACA-AAGAAGAAGAACAAATTGGCTTCTCCGATGAGT-AACCGGATCTGGAAC 165
||||| || | ||||||||||| ||||||| | | ||| ||| | |||||||||||||
Sbjct 259 GAAGATGA-AGAAGAAGAAGAAGAAATTGGATCCGCCGTTGA-TCGTCCGGATCTGGAAC 316
Query 166 GAGGAAGATGAGCTCTCTATCTTAAAGGGATTA-TTGGATTTTC-GAGCTAAGACAGGGC 223
||||||||||||||||||||||||||||| ||| ||| ||| | |||||||||||||
Sbjct 317 GAGGAAGATGAGCTCTCTATCTTAAAGGGGTTAGTTG-ATTA-CAGAGCTAAGACAGGAT 374
Query 224 TCGAATCC-AAAATTGATTGGGAAGCGTTTTATGGTTTCGTCAGAGGTTCCATTCATGTG 282
|| ||||| |||||||||||||| ||||||| | ||||| || || |||| || | | ||
Sbjct 375 TC-AATCCCAAAATTGATTGGGATGCGTTTTGTAGTTTCCTCGGAAGTTCTAT-CGT-TG 431
Query 283 CA-AG-T-CTCTAAGGATCAGGTGTTGAATAAGACCAAGAAGTTGAAGAAGAAG-TTCCT 338
| || | ||| ||||||||||| |||| ||| | || ||||||||| ||| || || |
Sbjct 432 -AGAGATTCTCCAAGGATCAGGTTTTGAGTAAAATCAGGAAGTTGAA-AAGGAGGTTTCA 489
Query 339 TGATCA-TATGGAGAAAATCAATCAAGG-AATTGATCCGCAT-TTTACTAGGTCTATTGA 395
|| ||| | |||||||||||||||||| ||| ||||| || ||||||||||||| |||
Sbjct 490 TGTTCACTC-GGAGAAAATCAATCAAGGGAAT-GATCC-CAAATTTACTAGGTCTAGTGA 546
Query 396 CTCTGAAGCCTTTGGATTTTCCAT-GATGATTTGGGG-CAA 434
|||||||||||||| ||||| | |||||||||||| |||
Sbjct 547 TTCTGAAGCCTTTGGGTTTTCT-TCGATGATTTGGGGACAA 586
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82128091620
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5