BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg893382 Length=573 Score E Sequences producing significant alignments: (Bits) Value AT1G59970.1 | Symbols: | Matrixin family protein | chr1:220735... 760 0.0 > AT1G59970.1 | Symbols: | Matrixin family protein | chr1:22073534-22074876 FORWARD LENGTH=1343 Length=1343 Score = 760 bits (411), Expect = 0.0 Identities = 511/559 (91%), Gaps = 7/559 (1%) Strand=Plus/Plus Query 1 CACCGGAAAACTCGATTCGTCGACTCT-AGGCAAATCGTTAAACCGAGATGCGGGAATCC 59 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 373 CACCGGAAAACTCGATTCCTCGACTCTCCGGCAAATCGTTAAACCGAGATGCGGGAATCC 432 Query 60 GGATACGATCGACGGAGTTTCGGAGATGAACGGTGG-AAGAAAGCTTCGTACGAC-GAAG 117 |||| ||||||||| |||||||||||||||||||| |||| | || |||||||| | || Sbjct 433 GGATTTGATCGACGGGGTTTCGGAGATGAACGGTGGTAAGATA-CTCCGTACGACTG-AG 490 Query 118 CGGTACTCGTTTTTCCCCGGGAAGCCACGGTGGCCGAAACGGAAACGAGATCTGACTTAC 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 491 AAATACTCGTTTTTCCCCGGGAAGCCACGGTGGCCGAAACGGAAACGAGATCTGACTTAT 550 Query 178 GCGTTTGTGCAGCAGAACAATTTAACCGACAATGTTAAACGCGTGTT-TGCACGCGCCTT 236 ||||||| || |||||| |||||||| ||| | |||||||||||||| | |||||||||| Sbjct 551 GCGTTTGCGCCGCAGAATAATTTAACAGACGAGGTTAAACGCGTGTTCT-CACGCGCCTT 609 Query 237 CACGCAATGGGCGGAGGTGACTCCGTTGAATTTCACGCGCTCTGAGTCTCTCCTCGGAGC 296 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct 610 CACGCGTTGGGCGGAGGTGACTCCGTTGAATTTCACGCGCTCTGAGTCTATCCTCCGTGC 669 Query 297 TGATATAGTGATCGGATTTTTCTCCGGTGAACATGGAGATGGAGAGCCGTTTGATGGAGC 356 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 670 GGATATAGTGATCGGATTTTTCTCCGGTGAACATGGTGATGGAGAGCCGTTTGATGGAGC 729 Query 357 TATGGGGACATTAGCGCACGCTTCATCTCCTCCTAAGGGGATGTTACATTTAGACGGTGA 416 |||||| ||||||||||| ||||| || ||||||| |||||||||||||||||||||||| Sbjct 730 TATGGGAACATTAGCGCATGCTTCTTCGCCTCCTACGGGGATGTTACATTTAGACGGTGA 789 Query 417 TGAGGATTGGTTGATCTCTGACGGTGAAATTAGCCGTCGGGTTTTACCGGTGACGTCGGT 476 ||||||||||||||||||| ||||||||||||| |||||| | |||||||||||| |||| Sbjct 790 TGAGGATTGGTTGATCTCTAACGGTGAAATTAGTCGTCGGATATTACCGGTGACGACGGT 849 Query 477 GGTGGATCTTGAATCGGTGGCGGTTCATGAGATCGGACATCTTTTGGGGTTAGGTCACTC 536 ||||||||||||||||||||| ||||||||||| || |||||||| ||| ||||||| || Sbjct 850 GGTGGATCTTGAATCGGTGGCTGTTCATGAGATTGGTCATCTTTTAGGGCTAGGTCATTC 909 Query 537 GTCAGTGGAAGATGCGATT 555 ||| ||||||||||||||| Sbjct 910 GTCGGTGGAAGATGCGATT 928 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27528312556 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5