BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893505
Length=1047
Score E
Sequences producing significant alignments: (Bits) Value
AT5G15940.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1541 0.0
AT5G04070.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 544 9e-154
> AT5G15940.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:5202801-5204875 FORWARD LENGTH=1255
Length=1255
Score = 1541 bits (834), Expect = 0.0
Identities = 981/1051 (93%), Gaps = 14/1051 (1%)
Strand=Plus/Plus
Query 1 ATGGTTCTGTTCTGGAGTATCGCTCTTGTTTCTTCTTATC-TTCAATTGCTTAGAGCAAG 59
||||||||||| |||| ||| ||||||||||||||||| | |||||||||||| ||||||
Sbjct 55 ATGGTTCTGTTTTGGAATATTGCTCTTGTTTCTTCTTA-CTTTCAATTGCTTAAAGCAAG 113
Query 60 GGTCTTTGGCTCAAAAGCTAC-TCCTATTTCTTGCTCCATCAATCCACATAATGGATCTT 118
| |||||||||| ||| |||| ||| || ||| |||||||||||||||| ||||||||||
Sbjct 114 GATCTTTGGCTCCAAATCTACTTCC-ATATCTGGCTCCATCAATCCACAAAATGGATCTT 172
Query 119 CGAGACCCATTTGTGTTATCACTGGTGCTACTTCTGGGCTTGGTAAGGCCACTGCATTTG 178
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 CTAGACCCATTTGTGTTATCACTGGTGCTACTTCTGGGCTTGGTAAGGCCACTGCATTTG 232
Query 179 CTCTTGCAGAGAAAGGTTTCTACGTTGTTCTTGTTGGACGGTCCTCTCAGCTTCTTTCAG 238
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 233 CTCTTGCAGAGAAAGGTTTCTACGTCGTTCTTGTTGGACGGTCCTCTCAGCTTCTTTCAG 292
Query 239 AGACATTGAAGGAAATTAAGAACAAGAACAAAGATGCCCAACTCAAGTATTTCGAAGCTG 298
|||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 293 AGACCCTGAAGGAAATTAAGAACAAGAACAAAGATGCTCAACTCAAGTCTTTCGAAGCTG 352
Query 299 ACATGTCTTGTTTTGAATCAATCTTCAAGTTGAAAAACTCTCTAGAGCAATGGCTATCGG 358
||||||||| |||||||||||||||| ||| ||||||||||||||||||||||| ||||
Sbjct 353 ACATGTCTTCATTTGAATCAATCTTCACGTTTAAAAACTCTCTAGAGCAATGGCTCTCGG 412
Query 359 ACTCAGAGTTACATCCTTCGATTCAGCTTTTGGTGAACAATGCTGGGATATTGGCAACTT 418
|||||| |||||||||||| |||||| |||||||||||||||||||||| ||||||||||
Sbjct 413 ACTCAGCGTTACATCCTTCTATTCAGGTTTTGGTGAACAATGCTGGGATCTTGGCAACTT 472
Query 419 CTAGTCGACCAACCATTGATGGTTATGACAGGATGATTGCTACAAACTATATTGGTCTAT 478
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 473 CTAGTCGACCAACCATTGATGGTTATGACAGGATGATTGCTACAAACTATGTTGGTCCAT 532
Query 479 TCTCTTTGACCAAACTTCTTTTGCCACTTCTGAAAAATAGCTACGTTCCTTCACGGGTCG 538
||| |||||||||||||||| | |||||||||||||| ||| | ||||||||||||||||
Sbjct 533 TCTTTTTGACCAAACTTCTTCTACCACTTCTGAAAAACAGCAATGTTCCTTCACGGGTCG 592
Query 539 TTAACGTTACATCTTTCACACATCGTTCAGCTTTCATTCAAAAGTTCA-ACAAGGACTCT 597
|||||||||||||||||||||||| ||||||||| ||||||||| | | ||||||| |||
Sbjct 593 TTAACGTTACATCTTTCACACATCATTCAGCTTTTATTCAAAAGCT-AGACAAGGATTCT 651
Query 598 GTAACTGGAGTATGTTTTTCTACATCAAACCAATATCCTTGCGCTCGAATCTACGAGTAT 657
|| |||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 652 GTTACTGGAGTGTGTTTTTCGACATCAAACCAATATCCATGCGCTCGAATCTACGAGTAT 711
Query 658 TCTAAATTATGTCTTGTACTGTTCTCATATGAATTGCACAGACAGCTTCGGCTCTTAGAC 717
||||||||||||||| ||||||||||||||||||||||| |||| ||||||||| |||||
Sbjct 712 TCTAAATTATGTCTTCTACTGTTCTCATATGAATTGCACCGACAACTTCGGCTCATAGAC 771
Query 718 GACTCACGCCATGTCTCTGTAATAGCTGCTGATCCAGGATTTGTGAAAACGAATATAATG 777
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 GACTCAAGCCATGTCTCTGTAATAGCTGCTGATCCAGGATTTGTGAAAACGAATATAATG 831
Query 778 AGAGAGCTTCCTTGTTACATAACTTCCATGGTGTTTCTTGGCTTCAGAATTCTTGGCCTA 837
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 832 CGTGAGCTTCCTTGTTACATAACTTCCATGGTGTTTCTTGGCTTCAAAATTCTTGGCCTC 891
Query 838 CTGCAATCCCCAGATGATGGAGCTGAATCTATCATCGATGCCGCTTTATCCACACCGGAA 897
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 892 CTGCAATCCCCAGAGGATGGAGCTGAATCTATCATCGATGCCGCTTTATCCACACCCGAA 951
Query 898 ACATCAGGTGCTTACTATTTTGGAGGAAAAGGAAGGACCATTGAATCATCACAAGTTTCT 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 ACATCAGGTGCTTACTATTTTGGAGGAAAAGGAAGGACCATTGAATCATCACAAGTTTCT 1011
Query 958 AGAGACCCGAAACGTGCTAAACAACTCTGGGAAATC-TCTTGTGATTTGTTCAATGACTT 1016
|||||||| |||| |||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1012 AGAGACCCTAAACTTGCTAAACAACTCTGGGAAA-CATCTTGTGATTTGTTCAATGACTT 1070
Query 1017 GCACTTGCATCTTCTTCATCAAAACAACTAA 1047
||| || | | |||||||| ||||||||
Sbjct 1071 GCA---GC-T-T-CTTCATCACCACAACTAA 1095
> AT5G04070.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:1102090-1104446 FORWARD LENGTH=1482
Length=1482
Score = 544 bits (294), Expect = 9e-154
Identities = 788/1018 (77%), Gaps = 67/1018 (7%)
Strand=Plus/Plus
Query 1 ATGGTTCTGTTCTGGAGTATCGCTCTTGTTTCTTCTTATC-TTCAATTGCTTAGAGCAAG 59
||||||||||| |||| || || || ||| ||| || | |||||||||||| | |||
Sbjct 203 ATGGTTCTGTTTTGGAACATTGCCCTCCTTTTTTCGTA-CTTTCAATTGCTTA-A-AAAG 259
Query 60 -G-GTCTTTGGCTCAAAAGCTA-CTCCT-AT-TTCTTGCTCCATCAATCCACATAATGGA 114
| |||||| | | ||| | | |||| | ||||||||||| ||| || || || |
Sbjct 260 AGTATCTTTGCCCCCAAATCAAGTTCCTCTTCTTCTTGCTCCA--AATTCA-ATCATTCA 316
Query 115 TCTTCGAGACCCATTTGTGTTATCACTGGTGCTACTTCTGGG-CTTGGTAAGGCCACTGC 173
| | | ||| |||||||||| |||||||||||||| ||| |||||||||||||||||
Sbjct 317 -C-AC-ACACCTGTTTGTGTTATAACTGGTGCTACTTC-GGGACTTGGTAAGGCCACTGC 372
Query 174 ATTTGCTCTTGC-AGAGAAAGGTTTCTACGTTGTTCTTGTTGGACGGTCCTCTCAGCTT- 231
||||||||| | || |||||||||||||||||||||||||||||||||||| || |||
Sbjct 373 GTTTGCTCTTTCAAG-GAAAGGTTTCTACGTTGTTCTTGTTGGACGGTCCTCGCA-CTTA 430
Query 232 CTTTCAGAGACATTGAAG-GAAATTAAGAA-CAAGAACAAAGATGCCCAACTCAA-G-TA 287
|| ||| |||| |||| | || ||||||| || |||| | |||||| ||||||| | |
Sbjct 431 CTATCAAAGACCTTGA-GTGATATTAAGAGGCA-GAACGAGGATGCCAAACTCAAAGCT- 487
Query 288 TTTCGAAGCTGACATGTCTTGTTTTGAATCAATCTTCAAGTTGAAAAACTCTCTAGAGCA 347
||| |||| ||||||||| | |||| ||| | | || ||||| | || ||||||||||||
Sbjct 488 TTT-GAAGTTGACATGTCGTCTTTTCAATTAGTTTTAAAGTTCAGAAGCTCTCTAGAGCA 546
Query 348 ATGGCTATCGGACTCAGAGTTACATCCTTCGATTC-AGCTTTTGGTGAACAATGCTGGGA 406
|||||| | || ||||| || ||| |||| | || |||||||||||||||||||||| |
Sbjct 547 ATGGCTTTTTGAGTCAGATTTGCATTCTTC-AGTCCAGCTTTTGGTGAACAATGCTGGAA 605
Query 407 TATTGGCAACTTCTAGTCGACCAACCATTGATGG-TTATGACAGGATGATTGCTACAAAC 465
|| ||||||| |||||||| ||||| |||| || || |||||||||||||||||||||
Sbjct 606 TACTGGCAACATCTAGTCGTCCAACTGTTGAAGGCTT-TGACAGGATGATTGCTACAAAT 664
Query 466 TATATTGGT-CTATTCTCTTTGACCAAACTTCTTTTGCCACTTCTGAAAAATAGCTAC-G 523
||| | || || |||||||||||||||||||| || || || |||| ||| ||| | |
Sbjct 665 TATGTCGGCGCT-TTCTCTTTGACCAAACTTCTCTTACCGCTCCTGAGAAACAGCC-CTG 722
Query 524 TTCCTTCACGGGTCGTTAACGTTACATCTTTCACACATCGTTCAGCTTTCATTCAAAAGT 583
| |||||| | || || || ||||||||||| ||||||||||| ||||| | | | ||
Sbjct 723 TGCCTTCAAGAGTAGTGAATGTTACATCTTTTACACATCGTTCTGCTTTTACTGGGAGGT 782
Query 584 TCAACAAGGACTCTGTAACTGGAGT-ATGTTTTTCTACATCAAACCAATATCCTTGCGCT 642
| ||| ||| ||||| |||||||| | |||| | | |||||| ||||||||||| |||
Sbjct 783 TTGACATGGATTCTGTTACTGGAGTGAACTTTT-CAAGATCAAAGCAATATCCTTGTGCT 841
Query 643 CGAATCTACGAGTATTCTAAATTATGTCTTGTACTGTTCTCATATGAATTGCACAGACAG 702
| ||||| ||||||||||||||||| ||| |||| ||||| || || |||| ||||||
Sbjct 842 AGGATCTATGAGTATTCTAAATTATGCCTTCTACTTTTCTCGTACGAGCTGCATAGACAG 901
Query 703 CTTCGGCTCTTAGACGACTCACGCCATGTCTCTGTAATAGCTGCT-GATCCAGGATTTGT 761
|||| ||| | || || |||| || ||||||| |||| | | ||||||||| ||
Sbjct 902 CTTCACCTCATGGATGATTCACATCACATCTCTGTTGTAGCGG-TAGATCCAGGAGCAGT 960
Query 762 GAAAACGAATATAATG-AGAGAGCTTCCTTGTTACATA-ACTTCCATGGTGTTTCT-TGG 818
||||| || |||||| | |||||||||| || ||| | || || | |||| | |||
Sbjct 961 AAAAACAAACATAATGCAT-GAGCTTCCTTCATATATACAAGTC-ATTGCGTTT-TGTGG 1017
Query 819 -CTTCA-GAATTCTTGGCCT-ACTGCAATCCCCAGATGATGGAGCTGAATCTATCATCGA 875
|| || || ||||||| || | |||| || ||||| |||| |||||||||| |||| ||
Sbjct 1018 TCT-CAAGA-TTCTTGGACTGA-TGCAGTCTCCAGAGGATGCAGCTGAATCTGTCATTGA 1074
Query 876 TGCCGCTTTATC-CACACCGGAAACATCAGGTGCTTACTAT-TTTGGAGGAAAAGGAAGG 933
||| |||||| | | |||| |||| |||||| || | | ||||| || | | ||
Sbjct 1075 TGCTGCTTTAGCTC-CACCTGAAATATCAGGCAAATATT-TCTTTGGCGG----G-A-GG 1126
Query 934 ACCATTGAATCATCA-CAAGTTTCTAGAGACCCGAAACGTG-CTAAACAACTCTGGGA 989
||||||||||| ||| || |||| || ||||||||| || |||| |||| |||||
Sbjct 1127 ACCATTGAATCTTCAACAC-TTTCCAGTGACCCGAAAA-TGGCTAAGGAACTTTGGGA 1182
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51339298234
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5