BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893605
Length=1932
Score E
Sequences producing significant alignments: (Bits) Value
AT5G16930.1 | Symbols: | AAA-type ATPase family protein | chr5... 3295 0.0
AT3G03060.1 | Symbols: | P-loop containing nucleoside triphosp... 1764 0.0
> AT5G16930.1 | Symbols: | AAA-type ATPase family protein | chr5:5568393-5571859
FORWARD LENGTH=2414
Length=2414
Score = 3295 bits (1784), Expect = 0.0
Identities = 1881/1929 (98%), Gaps = 2/1929 (0%)
Strand=Plus/Plus
Query 1 ATGGCTCAGAAACTTGCGATTGGTGTGATCTCAGCCCTAGCTGCCTCCGCTTCTCTCGCG 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 186 ATGGCTCAGAAAATTGCGATTGGTGTGATCTCAGCCCTAGCTGCCTCCGCTTCTCTCGCG 245
Query 61 CCGTCGAAATTCGCTGCTGCAGATGGACCTTTCACTTTCTCCGGCTTCTCCACCTCTCCG 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 246 CCGTCGAAATTCGCTGCTGCAGATGGACCTTTCACTTTCTCTGGCTTCTCCACTTCTCCG 305
Query 121 TCTGCTTCGATTCCTCAGCAACAAGTTTCTTCTCCGCCGGCGTCGGAATCTGGAAAAGAA 180
|||||||||||||||||||| |||| |||| |||||||||||||||||||||| ||||||
Sbjct 306 TCTGCTTCGATTCCTCAGCAGCAAGGTTCTACTCCGCCGGCGTCGGAATCTGGGAAAGAA 365
Query 181 CCGTCTGTTACTGGCGAAGAATCTGATGCTCCTCCTCGGATTCAGAACAATAATCCGAGA 240
||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 366 CCGTCTGTTGCTGGCGAAGAATCTGATGCTCCTCCTCGGATTCGGAACAATAATCCGAGA 425
Query 241 ACAACTTCAGCTGGATTTGATCCGGAAGCGCTT-GAGCGAGGAGCAAAGGCCTTGAAGGG 299
|||||||||||||| ||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 426 ACAACTTCAGCTGGGTTTGATCCGGAAGCG-TTGGAGCGAGGAGCAAAGGCCTTGAAAGG 484
Query 300 GATCAACAACTCAGCTCATGCCAAAAAGGTATTTGAAAGTATTAAGACTCAAGAAGAGAC 359
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 485 GATCAACAACTCAGCTCATGCCAAAAAGGTATTTGAAAGTATTAAGACTCGAGAAGAGAC 544
Query 360 GAGGCAGGCTGAGTTTACCGCTAAGGCGCAGGAGTTTAAAGCTATGCAATCCCAAGCTGA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 GAGGCAGGCTGAGTTTACCGCTAAGGCGCAGGAGTTTAAAGCTATGCAATCCCAAGCTGA 604
Query 420 AGCTGAGAGGCAAAGGGTAATATATGAGGAACAGAAGAAACTTGCTCAGCACCAAGCACA 479
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 605 AGCTGAGAGGCAAAGGGTGATATATGAGGAACAGAAGAAACTTGCTCAGCACCAAGCACA 664
Query 480 AACAAAATCACAGATGGCCCGCTATGAAGATGAGTTAGCAAGAAAAAGGATGCAGGCTGA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 AACAAAATCACAGATGGCCCGCTATGAAGATGAGTTAGCAAGAAAAAGGATGCAGGCTGA 724
Query 540 GAATGAGGCCCAGAGAACAAGAAACCAAGAACTTGTGAAAATGCAGGAAGAATCAGCAAT 599
|||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 725 GAATGAAGCCCAGAGGACAAGAAACCAAGAACTTGTGAAAATGCAAGAAGAATCAGCAAT 784
Query 600 TAGGCGGGAAGTAGCTCGACGAGCTACTGAAGAAGAGATTCAAGCACAGAGACGACAAAC 659
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct 785 TAGGCGGGAAGTAGCTCGACGAGCTACTGAGGAAGAGATTCAAGCCCAGAGACGACAGAC 844
Query 660 AGAGAGGGAGAAAGCTGAGATTGAACGTGAGACAATCAGGGTCAAAGCTATGGCAGAAGC 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 AGAGAGGGAGAAAGCTGAGATTGAACGTGAGACAATCAGGGTCAAAGCTATGGCAGAAGC 904
Query 720 TGAAGGGAGAGCTCGTGAATCAAAGCTTTCTGAGGATGTTAACAGGAGAATGCTTGTTGA 779
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 905 TGAAGGGAGAGCTCGTGAATCAAAGCTTTCTGAGGATGTCAACAGGAGAATGCTTGTTGA 964
Query 780 TCGTGCAAATGCAGAAAGAGAGAAATGGGTTTCTGCCATCAATACTACATTCGATCATAT 839
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 965 TCGTGCAAATGCAGAAAGAGAGAAATGGGTTTCTGCCATCAATACTACCTTCGATCATAT 1024
Query 840 TGGAGGGGGCTTGCGTACCATTCTAACGGATCAAAATAAGCTAATTGTTGCTGTTGGAGG 899
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1025 TGGAGGGGGGTTGCGTACCATTCTAACAGATCAAAATAAGCTAATTGTTGCTGTTGGAGG 1084
Query 900 TCTAACCGCTCTTGCAGCTGGGATCTACACAACGAGAGAAGGTGCCAAGGTTATCTGGAG 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1085 TCTAACCGCTCTTGCAGCTGGGATCTACACAACGAGAGAAGGTGCCAAGGTTATCTGGAG 1144
Query 960 CTACGTGGATAGAATATTAGGACAACCTTCTCTAATTAGAGAATCATCAAGAGGAAAGTA 1019
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1145 CTACGTAGATAGAATATTAGGACAACCTTCTCTAATTAGAGAATCATCGAGAGGAAAGTA 1204
Query 1020 CCCTTGGTCTGGTTCCGCTTCTCGTGTCTTGTCCACATTGCGGGGTGGTGGTAAGGAGTC 1079
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1205 CCCTTGGTCTGGTTCTGCTTCTCGTGTCTTGTCCACATTGCGGGGTGGTGGTAAGGAGTC 1264
Query 1080 TACTTCCAAAAATGGAAAAGGGTTTGGTGATGTTATTTTGCGTCCTGCTCTTGAAAAGAG 1139
||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1265 TACTTCCAAAACTGGAAAAGGGTTTGGTGATGTTATCTTGCGCCCTGCTCTTGAAAAGAG 1324
Query 1140 AATCGAACAGCTAGCTAATGCAACTGCCAACACAAAAGCCCACCAAGCACCTTTCCGAAA 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325 AATCGAACAGCTAGCTAATGCAACTGCCAACACAAAAGCCCACCAAGCACCTTTCCGAAA 1384
Query 1200 TATACTTTTCTACGGTCCACCAGGAACAGGGAAGACAATGGCTGCCCGAGAGCTGGCTCG 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1385 TATACTTTTCTACGGTCCACCAGGAACAGGGAAGACAATGGCTGCCCGAGAGCTGGCTCG 1444
Query 1260 TAGATCTGGTCTAGATTATGCATTGATGACGGGTGGAGATGTTGCTCCACTTGGAGCTCA 1319
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1445 AAGATCTGGTCTAGATTATGCATTGATGACGGGTGGAGATGTTGCTCCACTTGGAGCTCA 1504
Query 1320 GGCTGTAACAAAGATACACCAACTGTTTGACTGGTCCAAAAAATCTAAGAGAGGCTTGTT 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1505 GGCTGTAACAAAGATACACCAACTGTTTGACTGGTCCAAAAAATCTAAGAGAGGCTTGTT 1564
Query 1380 GCTCTTCATCGATGAAGCCGATGCATTTTTATGCGAGCGTAACAAAACATACATGAGCGA 1439
|||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||
Sbjct 1565 GCTCTTCATCGATGAAGCCGATGCATTTCTGTGCGAGCGGAACAAAACATACATGAGCGA 1624
Query 1440 AGCCCAAAGGAGTGCACTAAATGCACTCCTCTTCCGCACGGGTGACCAGTCCAAAGACAT 1499
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1625 AGCCCAAAGGAGTGCACTAAATGCCCTCCTCTTCCGTACGGGTGACCAGTCCAAAGACAT 1684
Query 1500 AGTCCTAGCGCTTGCCACAAACAGACCTGGTGATCTAGACTCAGCAGTGTCTGACCGTAT 1559
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1685 AGTCCTAGCGCTTGCCACAAACAGACCTGGTGATCTAGACTCAGCAGTGGCTGACCGTAT 1744
Query 1560 CGATGAGACGCTTGAGTTCCCCTTGCCTGGAGAAGAAGAGCGCTTCAAGCTTCTAAACCT 1619
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1745 CGATGAGACTCTTGAATTCCCCTTGCCTGGAGAAGAAGAGCGCTTCAAGCTTCTAAACCT 1804
Query 1620 CTACCTAGAAAAGTACATATCTAAGGCTAATCTAAAAAAGCCGGGTTTGCTCCAAAGCCT 1679
||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 1805 CTACCTAGAGAAGTACATATCTAAGACGAATCTAAAAAAGCCGGGTTTGCTCCAAAGCCT 1864
Query 1680 TTTCAAAAAAGAGCAGCAGAAAATTGGGATAAAAGGCATTACTGAGGATCTCCTGAAAGA 1739
|||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||
Sbjct 1865 TTTCAAAAAAGAGCAGCAGACAATTGAGATAAAAGGCGTTACTGAGGATCTCCTGAAAGA 1924
Query 1740 AGCTGCCGCCAAAACAAAAGGGTTTTCAGGTAGAGAAATCGCGAAATTGATGGCAAGCGT 1799
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1925 AGCTGCCGCCAAAACAAAAGGGTTTTCGGGTAGAGAAATCGCGAAATTGATGGCAAGCGT 1984
Query 1800 TCAAGCTGCTGTGTATGGAAGCGCAAACTGCTTATTGGACGCAACCCTTTTCAGAGAGGT 1859
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1985 TCAAGCTGCTGTGTATGGAAGCGCAAACTGCTTATTGGACGCAAACCTTTTCAGAGAGGT 2044
Query 1860 CATTGATTACAAAGTCGCAGAGCATCAACAGAGaaaaaaaCTAGCTGGAACCGATGCAGG 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2045 CATTGATTACAAAGTCGCAGAGCATCAACAGAGAAAAAAACTAGCTGGAACCGATGCAGG 2104
Query 1920 TAACAAGAA 1928
|||||||||
Sbjct 2105 TAACAAGAA 2113
> AT3G03060.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:692056-695648 FORWARD
LENGTH=2243
Length=2243
Score = 1764 bits (955), Expect = 0.0
Identities = 1492/1749 (85%), Gaps = 46/1749 (3%)
Strand=Plus/Plus
Query 180 ACCGTCTGTT-ACTGGCGAAGAATC-TGATGCTCCTCCTCGGA-TTCAG-AACAATAATC 235
|||||| ||| |||| |||||||| | | |||||||| | || || | || ||||||
Sbjct 282 ACCGTC-GTTGGCTGGTGAAGAATCTTCA-GCTCCTCCGC-GAGCTC-GCAATGATAATC 337
Query 236 CGAGAACAACTTCAGCTGGATTT-GATCCGGAAGCGCTTGAGCGAGGAGC-AAAGGCCTT 293
|||| |||| ||| | ||| ||| |||||||| || || |||||||| || ||| |||||
Sbjct 338 CGAGGACAAGTTCCGGTGG-TTTCGATCCGGAGGCACTGGAGCGAGGTGCTAAA-GCCTT 395
Query 294 GAAGGGGATCAACAACTCAGCTCATGCCAAAAAGGTATTTGAAAGTATTAAGAC-TCAAG 352
||| | ||| ||| | || || | || |||||||| ||||||||||||||| | ||||
Sbjct 396 GAAAGAGATTAACCATTCCTCTTACGCGAAAAAGGTTTTTGAAAGTATTAAG-CAGCAAG 454
Query 353 AAGAGACGAGGCAGGCTGAGTTTACCGCTAAGGCGCAGGAGTTTAAAGCTATGCAATCCC 412
||||||| | ||| |||||||| | | |||||||| |||||||||||||||||| |||
Sbjct 455 AAGAGACAAAGCAAACTGAGTTTGCAACGAAGGCGCAAGAGTTTAAAGCTATGCAAGCCC 514
Query 413 AAGCTGAAGCTGAGAGGCA-AAGGGTAATATATGAGGAACAGAAGAAA-CTTGCTCAGCA 470
|||||||| |||||||||| || |||||||||||| |||||||| ||| |||||||||||
Sbjct 515 AAGCTGAAACTGAGAGGCATAA-GGTAATATATGATGAACAGAA-AAAGCTTGCTCAGCA 572
Query 471 CCAAGCACAAACAAAATCACAGATGGCCCGCTATGAAGATGAGTTAGCAAGAAAAAGGAT 530
||||||||| |||||||| ||||||||||| ||||||||||| || |||||||| |||||
Sbjct 573 CCAAGCACAGACAAAATCGCAGATGGCCCGTTATGAAGATGACTTGGCAAGAAAGAGGAT 632
Query 531 GCAGGCTGAGAATGAGGCCCAGAGAACAAGAAACCAAGAACTTGTGAAAATGCAGGAAGA 590
|||||| ||||||||| ||| ||||||||||| |||||||||||||||||||| |||||
Sbjct 633 GCAGGCCGAGAATGAGTTCCATAGAACAAGAAATCAAGAACTTGTGAAAATGCAAGAAGA 692
Query 591 ATCAGCAATTAGGCGGGAAGTAGCTCGACGAGCTACTGAAGAAGAGATTCAAGCACAGAG 650
||||||||||||| |||| |||||||||||||||||| ||| |||| || || |||||
Sbjct 693 TTCAGCAATTAGGCAGGAACAAGCTCGACGAGCTACTGAGGAACAGATCCAGGCGCAGAG 752
Query 651 ACGACAAACAGAGAGGGAGAAAGCTGAGATTGAACGTGAGACAATCAGGGTCAAAGCTAT 710
||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 753 ACGCCAAACTGAGAGGGAGAAGGCTGAGATTGAACGTGAGACCATCAGGGTCAAAGCTAT 812
Query 711 GGCAGAAGCTGAAGGGAGAGCTCGTGAATCAAAGCTTTCTGAGGATGTTAACAGGAGAAT 770
|||||||| ||||| ||||| | |||| | | |||| |||| ||||| |||||||||||
Sbjct 813 AGCAGAAGCGGAAGGAAGAGCCCATGAAGCTAGGCTTGCTGAAGATGTAAACAGGAGAAT 872
Query 771 GCTTGTTGATCGTGCAAATGCAGAAAGAGAGAAATGGGTTTCTGCCATCAATACTACATT 830
|||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||
Sbjct 873 GCTTGTTGATCGTGCAAATGCAGAAAGAGAGAAATGGGTTGCTGCCATAAACACAACATT 932
Query 831 CGATCATATTGGAGGGGGCTTGCGTACCATTCTAACGGATCAAAATAAGCTAATTGTTGC 890
||| ||||||||||| || || ||| | ||||| |||||||||||||| || ||||| ||
Sbjct 933 CGACCATATTGGAGGCGGTTTACGTGCTATTCTGACGGATCAAAATAAACTGATTGTCGC 992
Query 891 TGTTGGAGGTCTAACCGCTCTTGCAGCTGGGATCTACACAACGAGAGAAGGTGCCAAGGT 950
|||||| ||| |||| ||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct 993 TGTTGGGGGTGTAACTGCTCTGGCAGCTGGAATCTACACAACGAGAGAAGGTGCAAAGGT 1052
Query 951 TATCTGGAGCTACGTGGATAGAATATTAGGACAACCTTC-TCTAATTAGAGAATCATCAA 1009
|||||||||||| ||||| ||||||||||||||||| || | |||| ||||||||||||
Sbjct 1053 TATCTGGAGCTATGTGGACAGAATATTAGGACAACCATCGT-TAATCCGAGAATCATCAA 1111
Query 1010 GAGGAAAGTACCCTTGGTCTGGTTCCGCTT-CTCGTGTCTTGTCCACATTGCGGGGTGGT 1068
|||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||
Sbjct 1112 GAGGCAAGTACCCTTGGTCTGGTTC-GCTTTCTCGTGTAATGTCCACATTGCGGGGT--- 1167
Query 1069 GGTAAGGAGTCTA-CTTCCAAAAATGGAAAAGGGTTTGGTGATGTTATTTTGCGTCCTGC 1127
|||||||| | ||||||||||||||||| |||| |||||||||||||||| |||| |
Sbjct 1168 ---AAGGAGTC-AGCTTCCAAAAATGGAAAAAGGTTCGGTGATGTTATTTTGCATCCTCC 1223
Query 1128 TCTTGAAAAGAGAATCGAACAGCTAGCTAA-TGCAACTGCCAACACAAAAGC-CCACCAA 1185
|| | ||||||||| || || ||||||| | |||| |||||||||||| | ||||||
Sbjct 1224 GCTAGCAAAGAGAATTGAGCACCTAGCTACCT-CAACCGCCAACACAAAA-CTCCACCAG 1281
Query 1186 GCACCTTTCCGAAATATACTTTTCTACGGTCCACCAGGAACAGGGAAGACAATGGCTGCC 1245
|| |||||||||||||| ||| || ||||||| ||||||||||| || |||||||| |||
Sbjct 1282 GCTCCTTTCCGAAATATTCTTCTCCACGGTCCTCCAGGAACAGGAAAAACAATGGCGGCC 1341
Query 1246 CGAGAGCTGGCTCGTAGATCTGGTCTAGATTATGCATTGATGACGGGTGGAGATGTTGCT 1305
||||||||||||||| ||||||| | ||||||||| ||||||| |||||||||||||||
Sbjct 1342 AGAGAGCTGGCTCGTAAATCTGGTTTGGATTATGCACTGATGACTGGTGGAGATGTTGCT 1401
Query 1306 CCACTTGGAGCTCAGGCTGTAACAAAGATACACCAACTGTTTGACTGGTCCAAAAAATCT 1365
|| ||||||||||||||||| |||||||| ||| |||||||||| ||| |||||| |||
Sbjct 1402 CCCCTTGGAGCTCAGGCTGTTACAAAGATTCACGAACTGTTTGATTGGGGCAAAAAGTCT 1461
Query 1366 AAGAGAGGCTTGTTGCTCTTCATCGATGAAGCCGATGCATTTTTATGCGAGCGTAACAAA 1425
|||||||| || ||||||||||| |||||||||||||||||||| |||||| | ||||||
Sbjct 1462 AAGAGAGGTTTATTGCTCTTCATTGATGAAGCCGATGCATTTTTGTGCGAGAGGAACAAA 1521
Query 1426 ACATACATGAGCGAAGCCCAAAGGAGTGCACTAAATGCACTCCTCTTCCGCACGGGTGAC 1485
||||||||||| ||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct 1522 ACATACATGAGTGAAGCCCAAAGGAGTGCTCTAAATGCTCTTCTCTTCCGCACGGGTGAT 1581
Query 1486 CAGTCCAAAGACATAGTCCTAGCGCTTGCCACAAACAGACCTGGTGATCT-AGACTCAGC 1544
|| ||||||||||||||| |||| || || |||||| |||||||||| || |||||||||
Sbjct 1582 CAATCCAAAGACATAGTCTTAGCACTAGCTACAAACCGACCTGGTGA-CTTAGACTCAGC 1640
Query 1545 AGTGTCTGACCGTATCGATGAGACGCT-T-GAGTTCCCCTTGCCTGGAGAAGAAGAGCGC 1602
||| |||||||| ||||||| | | | | || |||||||| |||||||||||||||||
Sbjct 1641 TGTGGCTGACCGTGTCGATGA-A-GTTCTCGAATTCCCCTTACCTGGAGAAGAAGAGCGG 1698
Query 1603 TTCAAGCTTCTAAACCTCTACCTAGAAAAGTACATATCTAAGGCTAATCTAAAAAAGCCG 1662
||||||||| |||||||||| ||||||||||||||| || ||||| || || ||||||
Sbjct 1699 TTCAAGCTTTTAAACCTCTATCTAGAAAAGTACATAGCTGAGGCTGGTCCAAGCAAGCCG 1758
Query 1663 GGTTTGCTCCAAAGCCTTTTCAAAAAAGAGCAGCAGAAAATTGGGATAAAAGGCATTACT 1722
|||||| || | |||| ||||| ||||| |||||||| || | |||||| || | ||
Sbjct 1759 GGTTTGTTCGACCGCCTCTTCAAGAAAGAACAGCAGAAGATCGAGATAAAGGGTGTCACG 1818
Query 1723 GAGGATCTCCTGAAAG-AAGCTGCCGCCAAAACAAAAGGGTTTTCAGGTAGAGAAATCGC 1781
||||| ||| | |||| |||| || || ||||| |||||||||||||||||||||| ||
Sbjct 1819 GAGGAGCTCTT-AAAGGAAGCGGCTGCAAAAACCGAAGGGTTTTCAGGTAGAGAAATTGC 1877
Query 1782 GAAATTGATGGCAAGCGTTCAAGCTGCTGTGTATGGAAGCGCAA-ACTGCT-TATTGGAC 1839
|||| |||||||||| |||||||| |||||||||||||| | | |||| | | ||||||
Sbjct 1878 GAAACTGATGGCAAGTGTTCAAGCAGCTGTGTATGGAAGTG-AGGACTG-TGTGTTGGAC 1935
Query 1840 GCAACCCTTTTCAGAGAGGTCATTGATTACAAAGTCGCAGAGCATCAACAGAGaaaaaaa 1899
| | |||||||||||||| ||||||||||||| ||||||||||||||||||| |||
Sbjct 1936 TCTATGCTTTTCAGAGAGGTTGTTGATTACAAAGTTGCAGAGCATCAACAGAGAAGGAAA 1995
Query 1900 CTAGCTGGA 1908
| ||||||
Sbjct 1996 TTGGCTGGA 2004
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95682238770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5