BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893637
Length=2616
Score E
Sequences producing significant alignments: (Bits) Value
AT5G37130.1 | Symbols: | Protein prenylyltransferase superfami... 2765 0.0
AT5G17270.1 | Symbols: | Protein prenylyltransferase superfami... 2591 0.0
> AT5G37130.1 | Symbols: | Protein prenylyltransferase superfamily
protein | chr5:14681378-14686684 FORWARD LENGTH=2866
Length=2866
Score = 2765 bits (1497), Expect = 0.0
Identities = 1794/1934 (93%), Gaps = 34/1934 (2%)
Strand=Plus/Plus
Query 1 ATGGTTGACGGCGAAGTTGAAACCCTTCGAGGTTATGAGCTCCGTCTCCTCCGGTGCACC 60
||||| | ||| |||||| ||| ||||| || || || ||||||||| |||||||||||
Sbjct 78 ATGGTCGGCGGGGAAGTTAAAATTCTTCGCGGGTACGAACTCCGTCTCATCCGGTGCACC 137
Query 61 GTCTCTTTAACACAACCAGATCCCCCTCTC---GAATCCCAGTTCGGAGTTCATCCACAC 117
|||||||| ||| | ||||||| |||||| |||||||| |||| |||||||||
Sbjct 138 GTCTCTTTGCCACTATCAGATCCTCCTCTCGATGAATCCCAACCCGGAACCCATCCACAC 197
Query 118 GACTCTCTTATAACGTCCCTTTTGTCTTCAATCGAGGCTGGAAACTATCTTGGAGCCCTA 177
||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||| ||
Sbjct 198 GACTCTCTTATAAAGTCCCTTTTGTCTTCAATCGAGGCTGGGAACTATCTTGAAGCTTTA 257
Query 178 GCCTCCGACGCTACTAAGCTAATACTCGGCGATTCCGAGTTCGACCTGGTCGACTCGGTT 237
|||||||| |||||||| ||||||||| | || |||| ||| | ||||| |||||
Sbjct 258 GCCTCCGAAGCTACTAATCTAATACTC-G-GA----GAGTACGA---GTTCGACCCGGTT 308
Query 238 GATTCCGCTGAACGAGTTTATTCCCAGCTTCTCGACAAGGTCGAATCGTTCGTGGTGAAC 297
|||||||| || |||||||| ||| |||||||| |||| ||||||||||||||| |||||
Sbjct 309 GATTCCGCCGAGCGAGTTTACTCCGAGCTTCTCAACAAAGTCGAATCGTTCGTGTTGAAC 368
Query 298 GATTCGTCAGATGAAATCGACAAGGCTCGCCGTGCTGTTCTGGTGATGTGCTTAGCAATC 357
||||| || ||||||||||| |||||||| ||| || |||| ||||||||||||||||||
Sbjct 369 GATTCTTCGGATGAAATCGATAAGGCTCGGCGTTCTTTTCTTGTGATGTGCTTAGCAATC 428
Query 358 GCGGCTGCTTTGTGGTTCACTCGGTGCAATTTGACCGGGTCGACGGAAGGATCAAC-AAA 416
||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||| |||
Sbjct 429 GCGGCTGCTTTTTGGTTCACTTGTTGCAATTTGACCGGGTCGACGCAAGGATCAACAAAA 488
Query 417 --TTCTG-TACCGTTT--A--A--AG--A-T------TTAGTTGAATGGGAGAACTGGGC 458
||| | |||||||| | | || | | || ||||||||||||||||||||
Sbjct 489 TGTTC-GTTACCGTTTAGAGTACCAGAAAGTAAGGAATTGGTTGAATGGGAGAACTGGGC 547
Query 459 TAAGATTCAGCTCATGTCTGCAGGTTCTGACTTGCTCGGGAAGTTTTCTAATCTCCAACA 518
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 548 TAAGATTCATCTCATGTCTGCAGGTTCTGACTTGCTCGGGAAGTTTTCTAATCTCCAGCA 607
Query 519 TTTAGTTTTTGCTAGATTGCTTCTGTTAAAGTTGAAAGATTTGTTGTTTGAGACAACTGC 578
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 608 TTTAGTTTTTGCTAGATTGCTGCTGTTAAAGTTGAAAGATTTGTTGTTTGAGACAAGTGC 667
Query 579 AACTGAAACTTTTGAA-TTAAGGAGTATTTCATGGTGGCTTGTCAGAGTTTTACTTATCC 637
||||||||||| || || ||||||||||||||||||||||||||||| |||||||| |
Sbjct 668 CTCTGAAACTTTTCAACTT-AGGAGTATTTCATGGTGGCTTGTCAGAGTCTTACTTATTC 726
Query 638 ATCAAAGAGTTCTACACGAGCGATCTTCATCTTTGTTTGAGATGTTGCAAGTTTACATGG 697
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 727 ATCAAAGAGTTCTTCACGAGCCATCTTCATCTTTGTTTGAGATGTTGCAAGTTTACATGG 786
Query 698 CCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTAAAAAGTTACTGGGGTTCCAAGT 757
||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct 787 CCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTCGAAAGCTACTGGGGTGCCAAGT 846
Query 758 TACTAGAAGACGAAGCTTCATCCATTACGTCAACCATCCATCTGGAAGCATGTGTACTGC 817
| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 847 TGCTACAAGACGAAGCTTCATCCATCACGTCAATCATCCATCTGGAAGCATGTGTACTGC 906
Query 818 AATATATATATGGAAGGATTGATCCTTCTCGGTTGCAGCTTGAATCTGCTAAAGCAGCAG 877
||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 907 AATATATATATCGAAGGATTGACCCTTTTCGGTTGCAGCTTGAATCTGCTAAAGCAGCAG 966
Query 878 CAGGGCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCGTACTATTCACCAAGTAGTAC 937
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct 967 CAGGGCTAGAGTTCTCTGTTACTGGGGCTCTGGGATTTCGTACTATTCACCAAGTAGTGC 1026
Query 938 CAAAGGCGCAGATGGTATTGGTAGCCAATACTAGCTCATCCAATGGGGATGTGAGGTTGG 997
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1027 CAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATCCAATGGGGCTGTGAGGTTGG 1086
Query 998 CCTCTGAGAAAGCTGATGTTGGACCTTATGGAGCTTGGGAAGGTGAAACACCTCAAGTAT 1057
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1087 CCTCTGAGAAAGCTGATGTTGGACCTTATGGAGCTTGGGAAGGTGAAACACCTCAAGTGT 1146
Query 1058 TTATGACTCCCAAACTAGTGAACAACGAGAGTGAATCTGGCAAAGATTCTGTGCCCTTAA 1117
||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||
Sbjct 1147 TTATGACTCCCAAACTAGTGAACAACGAGAGTGAAGCTGGCACAGATTCAGTGCCCTTAA 1206
Query 1118 AACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAATTGAAAGGGGTAGTCGGC 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1207 AACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAATTGAAAGGGGTAGTCGGC 1266
Query 1178 ACGATGCAATGCAAAGTTGGGATATGGCTCCATATATTGAGGCAATTGATTCTCAAAAGT 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1267 ACGATGCAATGCAAAGTTGGGATATGGCTCCATATATTGAGGCAATTGATTCTCAAAAGT 1326
Query 1238 CAACATATTTTGTTCTACGGTGTTTTTGTGACTTATTGCGTGTTCGATGGGAATCATCTC 1297
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 CAACCTATTTTGTTCTACGGTGTTTTTGTGACTTATTGCGTGTTCGATGGGAATCATCTC 1386
Query 1298 GATATCGTACAAGGGAACGCGCCCGGGATATGATGGATAAGCTGGTTGGAGCTATTAGCA 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1387 GATATCGTACAAGGGAACGCGCCCGGGATATGATGGATAAGCTGGTTGGAGCTATTAGCA 1446
Query 1358 AGAGCGATCCTGGAGTATCAAATAGGATCCCTTTATGCTATGCAGTGTATCTTCCTACTA 1417
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1447 AGAGCGATCCTGGAGTATCAAATCGGATCCCTTTATGCTATGCAGTGTATCTTCCTACTA 1506
Query 1418 TTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAGTTGCGGTTATGCTGGGGAAG 1477
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1507 TTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAGTTGTGGTTATGTTGGGGAAG 1566
Query 1478 CAATCACAATATTTGAGAGCCTGGAACTGTGGGATAATCTAATTTACTGCTACTGCTCCA 1537
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1567 CAATCACAATATTTGAGAGCCTGGAATTGTGGGATAATCTAATTTACTGCTACTGCTCCA 1626
Query 1538 TGCAAAAGAAATCAGCGGCTGTACATCTCATCAAAGCACGGCTTCATGAACGCCCAAATG 1597
|| ||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||
Sbjct 1627 TGGGAAAGAAATCAGCGGCTGTAGATCTCATCAATGCACGGCTTCTTGAACGCCCAAATG 1686
Query 1598 ACCCAAGATTATTGTGTTCATTGGGTGATGTTACGATTAACGATTCCTGTTATGAAAAAG 1657
|||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1687 ACCCAAGATTATGGTGTTCATTGGGTGATGTTACGATTTCCGATTCCTGTTATGAAAAAG 1746
Query 1658 CCCTGGAAGTTTCAAATGACAAGTCAGTTCGTGCTAAGCGGGCTCTTGCTCGCAGCGCCT 1717
|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct 1747 CCCTGGAAGTTTCAAATGACAAATCAGTTCGTGCTAAGCGGGCTCTTGCTCGAAGCGCAT 1806
Query 1718 ACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTGGGAGGCTGCAATGTCCTTGAATT 1777
|||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct 1807 ACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTGGGAGGCTGCAATGGCGTTAAATT 1866
Query 1778 CTCTGTATCCAGATGGTTGGTTTGCTCTTGGTACTGCTGCGTTGAAGGCCAGGGATGTTC 1837
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1867 CTCTGTATTCAGATGGTTGGTTTGCTCTTGGTGCTGCTGCGTTGAAGGCCAGGGATCTTC 1926
Query 1838 AGAAAGCACTGGATGCATTCACTTTCGCTGTTCATCTTGATCCTGACAATTGGCAGGCTT 1897
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1927 AGAAAGCACTGGATGCATTCACTTTAGCTGTTCATCTTGATCCTGACAATTGGCTGGCTT 1986
Query 1898 GGAACAACATTGCT 1911
||||||||||||||
Sbjct 1987 GGAACAACATTGCT 2000
Score = 296 bits (160), Expect = 7e-79
Identities = 208/231 (90%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 2343 AGAAGTGTGGAAAGACGACGACCGTTTCAAGAAGTTTGCAAGAGCATCATTGGAACTTTG 2402
|||| ||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 2453 AGAAATGTGGAAAGACAAAGAGCGTTTCAAGAAGTTTGCAAGAGCATCATTGGAACTTTG 2512
Query 2403 TAGAGTGTACATGGAGATGTCAGTGTC-GACAGGAAGCAGACGAGAACTGTTGAGTGCTG 2461
|||||||||||| ||||| |||| ||| | || ||||| |||||||||||| |||||||
Sbjct 2513 TAGAGTGTACATAGAGATCTCAGCGTCTGT-AGAAAGCAAACGAGAACTGTTTAGTGCTG 2571
Query 2462 AGATGCATTTGAAGAACACAATCAAACAAGCTAGAGAGAGCTTCCCG-GATACTGCAGAA 2520
||||||||||||||||||||||||||||||||||| ||||||| | || |||| ||||
Sbjct 2572 AGATGCATTTGAAGAACACAATCAAACAAGCTAGAAAGAGCTTTG-GTGAGACTGAAGAA 2630
Query 2521 TTGAAAGAGCTTGAAAGTTGCCTTGAGGAGGTGAGAAATGTTATGCAGAAG 2571
||||| |||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 2631 TTGAAGGAGCTTGAAAGTTGCCTTGAGGAGGTCAGAAATGTTACGCAGAAG 2681
> AT5G17270.1 | Symbols: | Protein prenylyltransferase superfamily
protein | chr5:5679991-5685597 FORWARD LENGTH=2704
Length=2704
Score = 2591 bits (1403), Expect = 0.0
Identities = 1785/1962 (91%), Gaps = 56/1962 (3%)
Strand=Plus/Plus
Query 1 ATGGTTGACGGCGAAGTTGAAACCCTTCGAGGTTATGAGCTCCGTCTCCTCCGGTGCACC 60
||||| |||||||||||||||| |||||| ||||| |||||||||||||||||||||||
Sbjct 5 ATGGTCGACGGCGAAGTTGAAATCCTTCGCGGTTACGAGCTCCGTCTCCTCCGGTGCACT 64
Query 61 GTCT-CTTTAACACA-ACCAGATCCCCCTCTCGAATCCCA---GTTC---GG-AGT---T 108
|| | |||| |||| | ||| | | |||||||||||||| | || || | | |
Sbjct 65 GTATCCTTT-CCACAGA-CAGGTTCTCCTCTCGAATCCCAGCCGCTCGATGGAACTCAAT 122
Query 109 --------CATCCACACGACTCTCTTATAACGTCCCTTTTGTCTTCAATCGAGGCTGGAA 160
|||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 123 CCGGAACCCATCCACACGACTCTCTTATAACGTCTCTTTTGTCTTCAATCGAGGCTGGAG 182
Query 161 ACTATCTTGGAGCCCTAGCCTCCGACGCTACTAAGCTAATACTCGGCGATTCCGAGTTCG 220
||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 183 ACTATCTTGGAGCTCTATCCTCCGACGCTACTAAGCTAATACTCGGAGATTCCGAGTTAA 242
Query 221 ACCTGGTCGACT-CGGTTGATTCCGCTGAACGAGTTTATTCCCAGCTTCTCGACAAGGTC 279
|| |||| || | ||||||||||||| || | |||||| ||| |||||||||||||||||
Sbjct 243 ACTTGGTTGA-TACGGTTGATTCCGCCGAGCAAGTTTACTCCGAGCTTCTCGACAAGGTC 301
Query 280 GAATCGTTCGTGGTGAACGATTCGTCAGATGAAATCGACAAGGCTCGCCGTGCTGTTCTG 339
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 302 GAATCGTTCGTGGTGAACGATTCTTCAGATGAAATCGATAAGGCTCGCCGTGCTGTTCTG 361
Query 340 GTGATGTGCTTAGCAATCGCGGCTGCTTTGTGGTTCACTCGGTGCAATTTGACCGGGTCG 399
|||||||||||||||||||| |||||||||||||||| || |||||| |||| |||||
Sbjct 362 GTGATGTGCTTAGCAATCGCTACTGCTTTGTGGTTCACCCGTTGCAATCTGACTGGGTCA 421
Query 400 ACGGAAGGATCAAC-AAA--TTC--TG-----TACCGT-T-------TAAAGATTTAGTT 441
|||||||||||||| ||| ||| || || || | ||| || ||||||
Sbjct 422 ACGGAAGGATCAACGAAATGTTCGTTGCCCCTTAGAGTGTCAGAGAGTAAGGAATTAGTT 481
Query 442 GAATGGGAGAACTGGGCTAAGATTCAGCTCATGTCTG-CAGGTTCTGACTTGCTCGGGAA 500
|| |||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct 482 GAGTGGGAGAACTGGGCTAAGATTCAGCTCATGTCTGTC-GGTTCTGACTTGCTTGGGAA 540
Query 501 GTTTTCTAATCTCCAACATTTAGTTTTTGCTAGATTGCTTCTGTTAAAGTTGAAAGATTT 560
||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 541 GTTTTCTAATCTCCAGCATTTAGTTTTTGCTAGATTGCTCCTGTTCAAGTTGAAAGATTT 600
Query 561 GTTGTTTGAGACAACTGCAACTGAAACTTTTGAATTAAGGAGTATTTCATGGTGGCTTGT 620
||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 601 GTTGTTTGAGATAACTTCAACTGAAACTTTTGAAGTAAGGAGTATTTCATGGTGGCTTGT 660
Query 621 CAGAGTTTTACTTATCCATCAAAGAGTTCTACACGAGCGATCTTCATCTTTGTTTGAGAT 680
|||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 661 CAGAGTTTTACTGATTCATCAAAGAGTTCTACAAGAGCGATCTTCATCTTTGTTTGAAAT 720
Query 681 GTTGCAAGTTTACATGGCCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTAAAAAG 740
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 721 GTTGCAAGTTTACATGGCCGAAGCTATAGACCATTTTGGAGAATTGGAAAAAGTAAAAAG 780
Query 741 TTACTGGGGTTCCAAGTTACTAGAAGACGAAGCTTCATCCATTACGTCAACCATCCATCT 800
||||||||| |||| || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct 781 CTACTGGGGTGCCAATTTGCTAGAAGACGAAGCTTCATCCATCACGTCAACTATCCATCT 840
Query 801 GGAAGCATGTGTACTGCAATATATATATGGAAGGATTGATCCTTCTCGGTTGCAGCTTGA 860
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 841 GGAAGCATGTGTACTGCAATATATATATGGAAGGATTGATCCTTCACGGTTGCAGCTTGA 900
Query 861 ATCTGCTAAAGCAGCAGCAGGGCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCGTAC 920
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 901 ATCTGCTAAAGCAGCAGCAAGCCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCGTAC 960
Query 921 TATTCACCAAGTAGTA-CCAAAGGCGCAGATGGTATTGGTAGCCAATACTAGCTCATCCA 979
|||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 961 TATTCACCAAGTAG-ATCCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATCCA 1019
Query 980 ATGGGGATGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGGAGCTTGGGAAG 1039
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1020 ATGGGGATGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGAAGCTTGGGGAG 1079
Query 1040 GTGAAACACCTCAAGTATTTATGACTCCCAAACTAGTGAACAACGAGAGTGAATCTGGCA 1099
||||| ||||| |||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 1080 GTGAAGCACCTGAAGTATATATGACTCCCAAACTAGTGAACAACGAGAGTGAAGCTGGCA 1139
Query 1100 AAGATTCTGTGCCCTTAAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAA 1159
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 AAGATTCTGTGCCCTTGAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAA 1199
Query 1160 TTGAAAGGGGTAGTCGGCACGATGCA-ATGCAAAGTTGGGATATGGCTCCATATATTGAG 1218
|||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||
Sbjct 1200 TTGAAAGGGGTAGTCGGCACGATG-AGATGCAAAGATGGGATATGGCTCCATATATTGAG 1258
Query 1219 GCAATTGATTCTCAAAAGTCAACATATTTTGTTCTACGGTGTTTTTGTGACTTATTGCGT 1278
||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1259 GCAATAGATTCTCAAAAGTCAACATATTTTGTTCTACGGTGTTTTTGTGACTTACTACGT 1318
Query 1279 GTTCGATGGGAATCATCTCGATATCGTACAA-GGGAACGCGCCCGGGATATGATGGATAA 1337
||||||||||||||| || || |||||||| |||| ||||||| || |||||||||||
Sbjct 1319 GTTCGATGGGAATCAACTAGAGGTCGTACAAAGGGA-CGCGCCCTAGAGATGATGGATAA 1377
Query 1338 GCTGGTTGGAGCTATTAGCAAGAGCGATCCTGGAGTATCAAATAGGATCCCTTTATGCTA 1397
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 1378 ATTGGTTGGAGCTATTAACAAGAGCGATCCTGGAGTATCAAACAGGATCCCTTTATGCTA 1437
Query 1398 TGCAGTGTATCTTCCTACTATTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAG 1457
||| || |||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 1438 TGCTGTCCATCTTCCTACTATTCCTGCTCTGAGAAAGGAATACGGTGAGCTTCTGGTGAG 1497
Query 1458 TTGCGGTTATGCT-GGGGAAGCAATCACAATATTTGAGAGCCTGGAACTGTGGGATAATC 1516
|||||||| || | |||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 1498 TTGCGGTT-TGGTTGGGGAAGCAATCACCATATTTGAGAGCCTGGAATTGTGGGATAATC 1556
Query 1517 TAATTTACTGCTACTGC-TCCATGCAAAAGAAATCAGCGGCTGTACATCTCATCAAAGCA 1575
|||| |||||||||||| | | || |||||||||||| |||||| |||||||||| |||
Sbjct 1557 TAATCTACTGCTACTGCCTTC-TGGGAAAGAAATCAGCAGCTGTAGATCTCATCAATGCA 1615
Query 1576 CGGCTTCATGAACGCCCAAATGACCCAAGATTATTGTGTTCA-TTGGGTGATGTTACGAT 1634
||||||| |||||| ||||||||||||||||||| ||||||| |||| ||||||||| ||
Sbjct 1616 CGGCTTCTTGAACGGCCAAATGACCCAAGATTATGGTGTTCACTTGG-TGATGTTACTAT 1674
Query 1635 TAACGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGACAAGTCAGTTCGTGCTAA 1694
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1675 AAATGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGATAAGTCAGTTCGTGCTAA 1734
Query 1695 GCGGGCTCTTGCTCGCAGCGCCTACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTG 1754
||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 1735 GCGCGCTCTTGCTCGCAGCGCATACAATCGCGGTGATTTTGAGAAGTCAAAGATGCTGTG 1794
Query 1755 GGAGGCTGCAATGTCCTTGAATTCTCTGTATCCAGATGGTTGGTTTGCTCTTGGTACTGC 1814
||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 1795 GGAGGCTGCAATGGCCTTAAATTCTCTGTACCCAGATGGTTGGTTTGCTCTTGGTGCTGC 1854
Query 1815 TGCGTTGAAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTCGCTGTTCATCT 1874
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1855 TGCGTTGAAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTTGCTGTTCAACT 1914
Query 1875 TGATCCTGACAATTGGCAGGCTTGGAACAACATTGCTTCTCT 1916
|||||| |||||| || ||||||||||||||||||||| |||
Sbjct 1915 TGATCCCGACAATGGGGAGGCTTGGAACAACATTGCTTGTCT 1956
Score = 326 bits (176), Expect = 9e-88
Identities = 241/272 (89%), Gaps = 6/272 (2%)
Strand=Plus/Plus
Query 2335 CAGGGATCAGAAGTGTGGAAAGACGACGACCGTTTCAAGAAGTTTGCAAGAGCATCATTG 2394
|||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||
Sbjct 2435 CAGGGATCAGAAGTGTGGAAAGACAAAGAGCGTTTCAAGAAGTTTGCAAGAGCATCATTG 2494
Query 2395 GAACTTTGTAGAGTGTACATGGAGATGTCAG-TGTCGACAGGAAGCAGACGAGAACTGTT 2453
||||||||||||||||| |||||||| |||| | || | |||||||| ||||||||||||
Sbjct 2495 GAACTTTGTAGAGTGTATATGGAGATCTCAGCT-TCCATAGGAAGCAAACGAGAACTGTT 2553
Query 2454 GAGTGCTGAGATGCATTTGAAGAACACAATCAAACAAGCTAGAGAGAGCTTCCCGGATAC 2513
| |||||||||||||||||||||||||||||||||||||| || ||||||| ||| |
Sbjct 2554 TACTGCTGAGATGCATTTGAAGAACACAATCAAACAAGCTACAGTGAGCTTCTTGGACAG 2613
Query 2514 TGCAGAATTGAAAGAGCTTGAAAGTTGCCTTGAGGAGGTGAGAAATGTTATGCAGAAGAC 2573
|| ||||||||| || ||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 2614 TGAAGAATTGAAGGAACTTGAAAGTTGCCTTGAGGAGGTAAGAAATGTCATGCAGAAAA- 2672
Query 2574 G-GAAGA-GAATAGAAGAAATACAAAAACATG 2603
| ||||| || || | || |||||||||||||
Sbjct 2673 GTGAAGAAGAGTATA-GAGATACAAAAACATG 2703
Score = 278 bits (150), Expect = 2e-73
Identities = 174/186 (94%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 1918 CGAGATAGCTGGCAGATATGGGAGAATTTCAGTCATGTAGCTATGGATGTGGGGAATACT 1977
||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||| |
Sbjct 2021 CGAGATAGCTGGCAGATGTGGGAAAATTTCAGTCATGTCGCTATGGATGTGGGAAATATT 2080
Query 1978 GATAAGGCTTTTGAAGCTATACAACAGGTACTGAAATTGAGCAAAAACAAGAAGATTGAT 2037
||| |||| |||||||||||||||||| |||||||| ||||||||||||||| | |||||
Sbjct 2081 GATCAGGCCTTTGAAGCTATACAACAGATACTGAAAATGAGCAAAAACAAGAGGGTTGAT 2140
Query 2038 GTTGTTTTATTGGACCGTATAATGACAGAGTTAGAAAATAGGAATTCAGCATGTAAGTCA 2097
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2141 GTTGTTTTATTGGACCGTATAATGACAGAGTTAGAAAAGAGGAATTCAGCATGTAAGTCA 2200
Query 2098 TCATCT 2103
||||||
Sbjct 2201 TCATCT 2206
Score = 135 bits (73), Expect = 2e-30
Identities = 108/124 (87%), Gaps = 6/124 (5%)
Strand=Plus/Plus
Query 2217 ATCATCTTTATCGATTGAAATCGAAGCTTCTTCAGATGAACT-GACGGAAACAAAA-CAG 2274
|||||||| ||||| ||||| ||||||||||||||||| | | || ||||||||| ||
Sbjct 2200 ATCATCTTCATCGACTGAAACCGAAGCTTCTTCAGATG-AGTCAACAGAAACAAAACCA- 2257
Query 2275 TGTGCTGCAACACCAGCTGAAACTCAACGCCACCTAGAGTTGCTTGGGGAAA-TTATTCA 2333
||| |||||||||||||||||||||||||||| ||||| || |||||| ||| |||||||
Sbjct 2258 TGTACTGCAACACCAGCTGAAACTCAACGCCAGCTAGAATTACTTGGG-AAAGTTATTCA 2316
Query 2334 GCAG 2337
||||
Sbjct 2317 GCAG 2320
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 129882215427
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5