BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893741
Length=1473
Score E
Sequences producing significant alignments: (Bits) Value
AT5G18220.1 | Symbols: | O-Glycosyl hydrolases family 17 prote... 2261 0.0
AT5G18210.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1640 0.0
> AT5G18220.1 | Symbols: | O-Glycosyl hydrolases family 17 protein
| chr5:6018914-6020453 REVERSE LENGTH=1467
Length=1467
Score = 2261 bits (1224), Expect = 0.0
Identities = 1392/1474 (94%), Gaps = 8/1474 (1%)
Strand=Plus/Plus
Query 1 ATGAGTAACCGACGGAAACAGAGCACCACTGTCGGCATCTTCCTATGCATCACCATCTCC 60
||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
Sbjct 1 ATGAGTAACCGACGGAAACAGAGCACCACTGCCGGCATCTTCCTCTGCATCACCA--T-- 56
Query 61 ACCTTATCTTTATTATCCGGCGACGTCTCCGCCTTGGGAGTAAACTGGGGAACGATGGCA 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 57 A--GTATCTTTATTATCCGGCGACGTCTCCGCCTTGGGAGTAAACTGGGGAACGATGTCA 114
Query 121 ACTCACCAGCTCCCTCCAAAGACGGTGGTACAGATGTTAAAAGACAACAACGTTAGAAAA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 115 ACTCACCAGCTCCCTCCAAAGACGGTGGTACAGATGTTAAAAGACAACAACGTCAAAAAA 174
Query 181 GTGAAGCTTTTCGATGCGGACACAAACACCATGGTAGCTCTTGCCGGCTCCGGTATCGAA 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 175 GTGAAGCTTTTCGATGCGGACACAAACACCATGGTAGCTCTTGCCGGCTCTGGTATCGAA 234
Query 241 GTTATGGTTGCAATCCCTAACGATCAGCTCAAAGCCATGGGAAGCTATAACAGAGCTAAA 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 235 GTTATGGTTGCAATCCCTAACGATCAGCTCAAAGCCATGGGAAGTTATAACAGAGCTAAA 294
Query 301 GATTGGGTTCGAAGAAACATCACTCGTTTCAACGATGACGTTAAAATCAAATACGTCGCC 360
|||||||||||||||||||||||||||||||| || || |||||||||||||| ||||||
Sbjct 295 GATTGGGTTCGAAGAAACATCACTCGTTTCAATGACGATGTTAAAATCAAATATGTCGCC 354
Query 361 GTTGGAAATGAGCCGTTTTTGACAGCTTATAATGGATCATTCCTTAACCTAACTTATCCA 420
|||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct 355 GTTGGAAATGAGCCGTTTTTGACAGCTTATAATGGATCATTCATAAACTTAACTTATCCA 414
Query 421 GCACTCTTCAACATCCAGAAAGCATTAAACGAAGCCGGAGTTGGAGATTTCATCAAAGCC 480
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 415 GCACTCTTCAACATCCAAAAAGCATTAAACGAAGCTGGAGTTGGAGATTTCATCAAAGCC 474
Query 481 ACCGTACCTTTAAACGCTGACGTCTATAATTCTCCGCTGGAAAATCCAGTTCCTTCCGCC 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 475 ACCGTACCTTTAAACGCTGACGTCTATAATTCTCCGCTGGAAAATCCAGTTCCTTCTGCC 534
Query 541 GGAAGTTTCCGACAAGACATCTTTGAAGAGATGAAACTCATAGTCAACTTCTTGGCTCAT 600
||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 535 GGAAGTTTCCGTCAAGACATCTTTGAAGAGATGAAACTAATAGTCAACTTCTTAGCTCAT 594
Query 601 AACAAAGCTCCCTTCACTGTCAACATTTACCCTTTCCTAAGTCTTTACCTCAGCAGCGAC 660
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 595 AACAAAGCTCCCTTCACTGTCAACATTTACCCTTTCCTAAGTCTTTACCTTAGCAGCGAT 654
Query 661 TTCCCTTTCGACTACGCCTTCTTTAATGGCCAGAACACCGTTAGTGATAATGGTGTTATC 720
|||||||| ||||| |||||||| |||||||| ||||| || || ||||| || ||||||
Sbjct 655 TTCCCTTTTGACTATGCCTTCTTCAATGGCCAAAACACTGTCAGCGATAACGGCGTTATC 714
Query 721 TACACAAACGTCTTT-GATGCCAATTTCGATACCCTATTGGCTTCGCTTAAAGCATTGGG 779
|| ||||| || ||| || ||||||||||||||||| |||||||| |||||||| |||||
Sbjct 715 TATACAAATGT-TTTCGACGCCAATTTCGATACCCTCTTGGCTTCACTTAAAGCTTTGGG 773
Query 780 TCATGGAGACATGTCAGTTATAGTTGGAGAAGTTGGTTGGCCAACGGATGGTGACAAGAA 839
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 774 TCATGGAGACATGACTGTTATAGTTGGAGAAGTTGGTTGGCCAACGGATGGTGACAAGAA 833
Query 840 CGCTAATATCCCAAACGCAGAACGCTTCTACACAGGTCTGCTTCCGAAGCTAGCAGCCAA 899
||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 834 TGCTAACATCCCAAACGCAGAACGCTTCTACACAGGTTTGCTTCCAAAGCTAGCAGCCAA 893
Query 900 CAGAGGAACACCTATGCGTCCAGGTTACATTGAAGTTTATCTCTTCGGATTCATTGATGA 959
||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct 894 CAGAGGAACACCTATGCGTCCGGGTTACATTGAAGTTTATCTCTTTGGATTCATCGATGA 953
Query 960 AGATGCAAAGAGTATAGCTCCTGGTAACTTTGAACGTCACTGGGGGATATTCAAATACGA 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 AGATGCAAAGAGTATAGCTCCTGGTAACTTTGAACGTCACTGGGGGATATTCAAATACGA 1013
Query 1020 TGGCCAGCCAAAATTTCCAGCGGATTTGTCAGGGGCAGGTCAGAAGAAGATCTTAACCGG 1079
|||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1014 TGGCCAACCGAAATTTCCAGCGGATTTGTCAGGAGCAGGTCAGAAGAAGATCTTAACCGG 1073
Query 1080 AGCTCAAAATGTTCAGTACTTGCAAAACCAGTGGTGTATGTTAAACCCGGATGGCCTCAC 1139
||||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||
Sbjct 1074 AGCTCAAAATGTTCAGTACTTGCGAAACCAGTGGTGTATGTTCAACCCTAATGCCCTCAC 1133
Query 1140 TTTCAGTAACAACACTAACCAGCTCGGGGATAACGTAAACTACGCGTGTACCTTCTCTGA 1199
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1134 TTTCAGCAACAACACTAACCAGCTCGGGGATAACGTAAACTACGCATGTACCTTCTCCGA 1193
Query 1200 CTGCACAGCTTTGGGGTATGGTTCCTCTTGTGGTAATCTCGATGAGGTCGGGAATGCGTC 1259
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1194 CTGCACAGCTTTGGGCTATGGTTCCTCTTGTGGTAATCTTGATGAGGTCGGGAATGCCTC 1253
Query 1260 GTATGCATTCAACATGTATTTTCAGGTGCAGAATCAGAAGGCAGAGGCTTGTGACTTTGA 1319
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1254 GTATGCATTCAACATGTATTTTCAGGTACAGAATCAAAAGGCAGAGGCTTGTGACTTTGA 1313
Query 1320 GGGCCTTGCGATTATCACTACCCGGAATATTTCTCGAGAACAGTGTAATTTTCCTATTCA 1379
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1314 GGGCCTTGCAATTATCACTACCAGGAATATTTCTCGAGAACAGTGTAATTTTCCTATTCA 1373
Query 1380 AATCGGAGATCCAACATCGGGACATAGTGATCATAACCATAGGTTCATCGGCTTGGCTCT 1439
|||||||||||||||||| |||||||||||||||||||| |||| ||| |||| ||||
Sbjct 1374 AATCGGAGATCCAACATCCGGACATAGTGATCATAACCACCGGTTTATCAGCTTCTCTCT 1433
Query 1440 GGTGAGTATGTTGCTACTCTTTATGGCACTATGA 1473
||||||||||||||||||||||| |||||||||
Sbjct 1434 GGTGAGTATGTTGCTACTCTTTACAGCACTATGA 1467
> AT5G18210.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:6017865-6019993 FORWARD LENGTH=1908
Length=1908
Score = 1640 bits (888), Expect = 0.0
Identities = 1017/1081 (94%), Gaps = 2/1081 (0%)
Strand=Plus/Minus
Query 394 GGATCATTCCTTAACCTAACTTATCCAGCACTCTTCAACATCCAGAAAGCATTAAACGAA 453
||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1908 GGATCATTCATAAACTTAACTTATCCAGCACTCTTCAACATCCAAAAAGCATTAAACGAA 1849
Query 454 GCCGGAGTTGGAGATTTCATCAAAGCCACCGTACCTTTAAACGCTGACGTCTATAATTCT 513
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1848 GCTGGAGTTGGAGATTTCATCAAAGCCACCGTACCTTTAAACGCTGACGTCTATAATTCT 1789
Query 514 CCGCTGGAAAATCCAGTTCCTTCCGCCGGAAGTTTCCGACAAGACATCTTTGAAGAGATG 573
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1788 CCGCTGGAAAATCCAGTTCCTTCTGCCGGAAGTTTCCGTCAAGACATCTTTGAAGAGATG 1729
Query 574 AAACTCATAGTCAACTTCTTGGCTCATAACAAAGCTCCCTTCACTGTCAACATTTACCCT 633
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1728 AAACTAATAGTCAACTTCTTAGCTCATAACAAAGCTCCCTTCACTGTCAACATTTACCCT 1669
Query 634 TTCCTAAGTCTTTACCTCAGCAGCGACTTCCCTTTCGACTACGCCTTCTTTAATGGCCAG 693
||||||||||||||||| |||||||| |||||||| ||||| |||||||| ||||||||
Sbjct 1668 TTCCTAAGTCTTTACCTTAGCAGCGATTTCCCTTTTGACTATGCCTTCTTCAATGGCCAA 1609
Query 694 AACACCGTTAGTGATAATGGTGTTATCTACACAAACGTCTTT-GATGCCAATTTCGATAC 752
||||| || || ||||| || |||||||| ||||| || ||| || ||||||||||||||
Sbjct 1608 AACACTGTCAGCGATAACGGCGTTATCTATACAAATGT-TTTCGACGCCAATTTCGATAC 1550
Query 753 CCTATTGGCTTCGCTTAAAGCATTGGGTCATGGAGACATGTCAGTTATAGTTGGAGAAGT 812
||| |||||||| |||||||| |||||||||||||||||| | |||||||||||||||||
Sbjct 1549 CCTCTTGGCTTCACTTAAAGCTTTGGGTCATGGAGACATGACTGTTATAGTTGGAGAAGT 1490
Query 813 TGGTTGGCCAACGGATGGTGACAAGAACGCTAATATCCCAAACGCAGAACGCTTCTACAC 872
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1489 TGGTTGGCCAACGGATGGTGACAAGAATGCTAACATCCCAAACGCAGAACGCTTCTACAC 1430
Query 873 AGGTCTGCTTCCGAAGCTAGCAGCCAACAGAGGAACACCTATGCGTCCAGGTTACATTGA 932
|||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1429 AGGTTTGCTTCCAAAGCTAGCAGCCAACAGAGGAACACCTATGCGTCCGGGTTACATTGA 1370
Query 933 AGTTTATCTCTTCGGATTCATTGATGAAGATGCAAAGAGTATAGCTCCTGGTAACTTTGA 992
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1369 AGTTTATCTCTTTGGATTCATCGATGAAGATGCAAAGAGTATAGCTCCTGGTAACTTTGA 1310
Query 993 ACGTCACTGGGGGATATTCAAATACGATGGCCAGCCAAAATTTCCAGCGGATTTGTCAGG 1052
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1309 ACGTCACTGGGGGATATTCAAATACGATGGCCAACCGAAATTTCCAGCGGATTTGTCAGG 1250
Query 1053 GGCAGGTCAGAAGAAGATCTTAACCGGAGCTCAAAATGTTCAGTACTTGCAAAACCAGTG 1112
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1249 AGCAGGTCAGAAGAAGATCTTAACCGGAGCTCAAAATGTTCAGTACTTGCGAAACCAGTG 1190
Query 1113 GTGTATGTTAAACCCGGATGGCCTCACTTTCAGTAACAACACTAACCAGCTCGGGGATAA 1172
||||||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 1189 GTGTATGTTCAACCCTAATGCCCTCACTTTCAGCAACAACACTAACCAGCTCGGGGATAA 1130
Query 1173 CGTAAACTACGCGTGTACCTTCTCTGACTGCACAGCTTTGGGGTATGGTTCCTCTTGTGG 1232
|||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1129 CGTAAACTACGCATGTACCTTCTCCGACTGCACAGCTTTGGGCTATGGTTCCTCTTGTGG 1070
Query 1233 TAATCTCGATGAGGTCGGGAATGCGTCGTATGCATTCAACATGTATTTTCAGGTGCAGAA 1292
|||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1069 TAATCTTGATGAGGTCGGGAATGCCTCGTATGCATTCAACATGTATTTTCAGGTACAGAA 1010
Query 1293 TCAGAAGGCAGAGGCTTGTGACTTTGAGGGCCTTGCGATTATCACTACCCGGAATATTTC 1352
||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 1009 TCAAAAGGCAGAGGCTTGTGACTTTGAGGGCCTTGCAATTATCACTACCAGGAATATTTC 950
Query 1353 TCGAGAACAGTGTAATTTTCCTATTCAAATCGGAGATCCAACATCGGGACATAGTGATCA 1412
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 949 TCGAGAACAGTGTAATTTTCCTATTCAAATCGGAGATCCAACATCCGGACATAGTGATCA 890
Query 1413 TAACCATAGGTTCATCGGCTTGGCTCTGGTGAGTATGTTGCTACTCTTTATGGCACTATG 1472
|||||| |||| ||| |||| ||||||||||||||||||||||||||| ||||||||
Sbjct 889 TAACCACCGGTTTATCAGCTTCTCTCTGGTGAGTATGTTGCTACTCTTTACAGCACTATG 830
Query 1473 A 1473
|
Sbjct 829 A 829
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72640188615
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5