BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893788
Length=1110
Score E
Sequences producing significant alignments: (Bits) Value
AT5G18640.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1650 0.0
AT5G18630.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1352 0.0
> AT5G18640.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:6212802-6215782 FORWARD LENGTH=1724
Length=1724
Score = 1650 bits (893), Expect = 0.0
Identities = 1016/1077 (94%), Gaps = 2/1077 (0%)
Strand=Plus/Plus
Query 35 ATATGGGACAAAAGAGATGGTTCTTCTTGCTGGCATTTTTTGCTTGTCTTTTTTCATCTT 94
||||||||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||
Sbjct 361 ATATGGGACAAAAGAGATGGTTCTTCTTGTTGGCAATTTTTGTTTGTCTTGTTTCATCTT 420
Query 95 CATGTGGTAGAGTTCTCAAGTTGAAGAGTGATGATGATCGACCTGTTTACAACCACACGC 154
|||||||||||||||||||||| ||||| ||||||| ||||||||| ||||| || ||||
Sbjct 421 CATGTGGTAGAGTTCTCAAGTTTAAGAGCGATGATGGTCGACCTGTGTACAATCATACGC 480
Query 155 TTGCCATAACACTTGTGGAGTATACTTCTGCGGTCTATATGTCTGATTTGTCAGAACTCT 214
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TTGCCATCACACTTGTGGAGTATACTTCTGCGGTCTATATGTCTGATTTGTCAGAACTCT 540
Query 215 TCACTTGGACATGCGAAAGATGCAATGGTTTGACAAAGGGTTTCGAAGTAATAGAGATAA 274
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 541 TCACTTGGACATGCGAAAGATGCAATGGTTTGACAAAGGGTTTTGAGGTAATAGAGATAA 600
Query 275 TAGTTGACGTTGAGCACTGCTTACAGGCGTATGTTGGGGTGGCTAAGGATTTAAATGCTA 334
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 601 TAGTTGACGTTGAGCACTGCTTACAGGCATATGTTGGGGTGGCTAAGGATTTGAATGCTA 660
Query 335 TCATCATTGCATTTCGGGGAACTCAAGAACACAGCATACAAAATTGGGTCTCAGACTTGT 394
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TCATTATTGCATTTCGGGGAACTCAAGAACACAGCATACAAAATTGGGTCTCAGACTTGT 720
Query 395 TCTGGAAACAGCTCGATTTGAATTACCCTGATATGCCAGATGCAATGGTGCACCATGGAT 454
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
Sbjct 721 TCTGGAAACAGCTCGATCTAAATTACCCTGATATGCCAGATGCAATGGTGCACCATGGCT 780
Query 455 TTTATAGTGCTTATCACAACACAACTGTACGGCCTGCGGTTTTGGATGCAGTAAAACGAG 514
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 781 TTTATAGTGCTTATCACAATACAACTGTACGGCCTGCAGTTTTGGATGCAGTAAAACGAG 840
Query 515 CAAAGAAATCATATGGGGCGAATCTCAGCATCATGGTGACTGGTCATTCAATGGGAGGAG 574
||||| |||| |||||||| || |||| ||||||||||||||||||||||||||||||||
Sbjct 841 CAAAGGAATCCTATGGGGCCAACCTCAACATCATGGTGACTGGTCATTCAATGGGAGGAG 900
Query 575 CCATGGCTTCCTTTTGTGCGCTAGACCTAGTTGTAAATGAAG-ATGAAGAAAACGTACAG 633
|||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||
Sbjct 901 CCATGGCTTCCTTTTGTGCGCTAGACCTAGTTGTTAATGAAGGA-GAAGAAAACGTACAA 959
Query 634 GTTATGACATTTGGGCAACCCCGTGTTGGGAATGCTGCTTTTGCATCTTATTACAATTTG 693
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 960 GTTATGACATTTGGGCAACCTCGTGTTGGGAATGCTGCTTTTGCATCTTATTTCAATTTG 1019
Query 694 CTTGTGCCTAATACCTTCAGGATCATACATGACCATGATATAGTTCCTCATCTACCTCCT 753
|||||||||||||||||| ||||||||||||||| ||| |||||||||||||| ||||||
Sbjct 1020 CTTGTGCCTAATACCTTCCGGATCATACATGACCGTGACATAGTTCCTCATCTGCCTCCT 1079
Query 754 TACTATCATCTTTTCCCTCAAAAAACATACCATCACTTCCCAACAGAGGTGTGGGTGACA 813
||||||||||||||||||||||||||||| || |||||||| |||||||||||| |||||
Sbjct 1080 TACTATCATCTTTTCCCTCAAAAAACATATCACCACTTCCCCACAGAGGTGTGGTTGACA 1139
Query 814 GAACTTAGTGTTTTGAATATTGTTATTCGTGGTGTAGAGAAAGTTTGTGACAACACCGGT 873
||||| ||| |||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 1140 GAACTAAGTATTTTGAATATTGTTATCCGTGGTGTGGAAAAAGTTTGTGACAACACCGGT 1199
Query 874 GAAGATCCTACGTGCAGCAGATCGGTAATGGGAAGTAGCATATCCGACCATTTAACGTAC 933
||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1200 GAAGATCCTACATGCAGCAGATCGGTAATGGGAAATAGCATATCTGACCATTTAACGTAC 1259
Query 934 TTTGGAGTGGAGTTAATGGGTGAGACTTGGAGACAATGCAACATAGTGATGAGCCATGAG 993
|||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||||
Sbjct 1260 TTTGGAGTGGAGTTGATGGGTGAGACTTGGAGGCAATGTAACATAGTGATGGGCCATGAG 1319
Query 994 ATGGAGAATTACAGCAGGAAAGATTCAAAGGGTAACATATTCCTGTCGCGGACAGTTCCT 1053
||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1320 ATGGAGAGTTACAGTAGGAAAGATTCAAAGGGTAACATATTCCTTTCGCGGACAGTTCCT 1379
Query 1054 TCCACAGACGTAACCAAAACAAAAAGTATATTTAAAACCGGAATCTCTAGTCTATAG 1110
||||| || |||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1380 TCCACGGAGGTAATCAAAACAAAAAGTATATCCAAAACCGGAATCTCAAGTCTATAG 1436
> AT5G18630.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr5:6202633-6205737 FORWARD LENGTH=1585
Length=1585
Score = 1352 bits (732), Expect = 0.0
Identities = 976/1092 (89%), Gaps = 23/1092 (2%)
Strand=Plus/Plus
Query 32 AGAATATGGGACAAAAGAGATGGTTCTTCTTGCTGGCATTTTTTGCTTGTCTTTTTTCAT 91
|||| |||||||||||||||| ||| |||||||||||| ||||| ||| |||| ||||||
Sbjct 215 AGAACATGGGACAAAAGAGATTGTTGTTCTTGCTGGCAGTTTTTACTTTTCTTGTTTCAT 274
Query 92 CTTCATGTGGTAGA---GTTCTCAAGTTGAAGAGTGATGATGATCGACCTGTTTACAACC 148
|||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 275 CTTCATATGGTAGAGGTGTTCTCAAGTTGAAGAGCGATGATGATCGACCTGTTTACAACC 334
Query 149 ACACGCTTGCCATAACACTTGTGGAGTATACTTCTGCGGTCTAT-ATGTCTGATTTGTCA 207
| ||||||||| | || |||||||||||| | |||||||||||| | |||||||||| ||
Sbjct 335 ATACGCTTGCCGTCACGCTTGTGGAGTATGCCTCTGCGGTCTATGA-GTCTGATTTGACA 393
Query 208 GAACTCTTCACTTGGACATGCGAAAGATGCAATGGTTTGACAAAGGGTTTCGAAGTAATA 267
|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 394 AAACTCTTCACTTGGACGTGCGAAAGATGCAATGGTTTGACAAAGGATTTCGAAGTAATA 453
Query 268 GAGATAATAGTTGACGTTGAGCACTGCTTACAGGCGTATGTTGGGGTGGCTAAGGATTTA 327
||| | ||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 454 GAGGTCATATTTGACGTTGAACACTGCTTACAGGCGTATGTTGGGGTGGCTAAGGATTTG 513
Query 328 AATGCTATCATCATTGCATTTCGGGGAACTCAAGAACACAGCATACAAAATTGGGTCTCA 387
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 AATGCTATCATTATTGCATTTCGGGGAACTCAAGAACACAGCATACAAAATTGGGTCTCA 573
Query 388 GACTTGTTCTGGAAACAGCTCGATTTGAATTACCCTGATATGCCAGATGCAATGGTGCAC 447
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 574 GACTTGTTCTGGAAACAGCTCGATCTGAATTACCCTGACATGCCAGATGCAATGGTGCAC 633
Query 448 CATGGATTTTATAGTGCTTATCACAACACAACTGTACGGCCTGCGGTTTTGGATGCAGTA 507
||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct 634 CATGGCTTTTACAGTGCTTATCACAATACAACTTTACGGCCTGCGGTTTTGGATGCAATA 693
Query 508 AAACGAGC-AAAGAAA-TCATATGGGGCGAATC-TCAGCATCATGGTGACTGGTCATTCA 564
| ||||| ||| ||| || || |||||||| | ||| |||||| ||||| |||||||||
Sbjct 694 ACACGAGTGAAA-AAAGTC-TACGGGGCGAA-CATCAACATCATAGTGACCGGTCATTCA 750
Query 565 ATGGGAGGAGCCATGGCTTCCTTTTGTGCG-CTAGACCTAGTTGTAAATGAAGATGAAGA 623
|||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||
Sbjct 751 ATGGGAGGAGCCATGGCTTCCTTTTGTG-GTCTAGACCTAGTTGTAAATGAAGGTGAAGA 809
Query 624 AAACGTACAGGTTATGACATTTGGGCAACCCCGTGTTGGGAATGCTGCTTTTGCATCTTA 683
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 810 AAACGTACAGGTTATGACATTTGGGCAACCTCGTGTTGGGAATGCCGCTTTTGCATCTTA 869
Query 684 TTACAATTTGCTTGTGCCTAATACCTTCAGGATCATACATGACCATGATATAGTTCCTCA 743
||||| |||||||||||| ||||||||| |||||| ||||||| |||||| ||||||||
Sbjct 870 TTACAGTTTGCTTGTGCCCAATACCTTCCGGATCACGCATGACCGTGATATGGTTCCTCA 929
Query 744 TCTACCTCCTTACTATCATCTTTTCCCTCAAAAAACATACCATCACTTCCCAACAGAGGT 803
||| |||||||||||| | | ||||||||||||||||||||| |||||||||||||||||
Sbjct 930 TCTGCCTCCTTACTATTACCATTTCCCTCAAAAAACATACCACCACTTCCCAACAGAGGT 989
Query 804 GTGGGTGACAGAACTT-AGTGTTTT-GAATATTGTTATTCGTGGTGTAGAGAAAGTTTGT 861
|||||||| ||| || ||| |||| |||| ||||| || |||| | ||||||||||||
Sbjct 990 GTGGGTGAAAGAT-TTCAGT-TTTTCGAATTTTGTTCTTTTTGGTTTGGAGAAAGTTTGT 1047
Query 862 GACAACACCGGTGAAGATCCTACGTGCAGCAGATCGGTAATGGGAAGTAGCATATCCGAC 921
|||||||| |||||||||||||| |||||||||||||||| ||||| |||||| || |||
Sbjct 1048 GACAACACTGGTGAAGATCCTACTTGCAGCAGATCGGTAAGGGGAAATAGCATTTCTGAC 1107
Query 922 CATTTAACGTACTTTGGAGTGGAGTT-AATGGGTGAGACTTGGAGACAATGCAACATAGT 980
||||||| ||||||||| || ||||| || | |||||| ||||||||| |||| ||||||
Sbjct 1108 CATTTAAGGTACTTTGGGGTAGAGTTGAA-GTGTGAGAGTTGGAGACAGTGCAGCATAGT 1166
Query 981 GATGAGCCATGAGATGGAGAATTACAGCAGGAAAGATTCAAAGGGTAACATATTCCTGTC 1040
||||| || || |||||| |||||||||||||||||||| ||||||| ||||||| ||
Sbjct 1167 GATGAATCAAGATATGGAGCGTTACAGCAGGAAAGATTCAAGGGGTAACTTATTCCTCTC 1226
Query 1041 GCGGACAGTTCCTTCC-ACAG-ACGTAACCAAAACAAAAAGTATATTTAAAACCGGAATC 1098
||||||||||||| || | || ||||| |||||||| | ||| ||||||||||||
Sbjct 1227 GCGGACAGTTCCT-CCTA-AGGACGTAGTCAAAACAAGTTCTCTATCGAAAACCGGAATC 1284
Query 1099 TCTAGTCTATAG 1110
|||||||| |||
Sbjct 1285 TCTAGTCTGTAG 1296
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54417390780
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5