BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg893806
Length=2676
Score E
Sequences producing significant alignments: (Bits) Value
AT5G18860.1 | Symbols: | inosine-uridine preferring nucleoside... 4119 0.0
AT5G18890.1 | Symbols: | Inosine-uridine preferring nucleoside... 1818 0.0
AT5G18870.1 | Symbols: | Inosine-uridine preferring nucleoside... 132 2e-29
> AT5G18860.1 | Symbols: | inosine-uridine preferring nucleoside
hydrolase family protein | chr5:6290676-6295811 FORWARD LENGTH=3250
Length=3250
Score = 4119 bits (2230), Expect = 0.0
Identities = 2544/2692 (95%), Gaps = 36/2692 (1%)
Strand=Plus/Plus
Query 3 GATGTTGACGAGCCCAACTTTGAAGAGTTTATGGTTCTTGTTCACCACAGTAGTCACTAT 62
||||||||||||||| ||||||||||||||||||||| || || |||||||
Sbjct 347 GATGTTGACGAGCCCTACTTTGAAGAGTTTATGGTTC---TT-------GT--TCACTAT 394
Query 63 TCTTGGAATCTTAGGACAAAACCTCCCTTGTGTTTTGTCTACTCCACACCGTATTCTAGT 122
||||||| |||||||||||||||||||||||||| |||||| | ||||||||||||||||
Sbjct 395 TCTTGGACTCTTAGGACAAAACCTCCCTTGTGTTCTGTCTAGTTCACACCGTATTCTAGT 454
Query 123 GGATACAGATGTCGACACAGACGATTTATTCGCTATACTCTACCTCCTGAAACTCAACAA 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 GGATACAGATGTCGACACAGACGATTTATTCGCTATACTCTACCTCCTGAAACTCAACAA 514
Query 183 ATCAGAATTCGATCTAGTCGGGATTACATTGAGTGCGAATGCATGGACAAACGCAGGACA 242
||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 515 ATCAGAATTTGATCTAGTCGGGATTACACTGAGTGCAAATGCATGGACAAACGCAGGACA 574
Query 243 CGCCGTGAATCAAGTGTATGATTTATTGCACATGATGGGTCGTGACGATATCCCCGTTGG 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 575 CGCCGTGAATCAAGTGTATGATTTATTGCACATGATGGATCGTGACGATATCCCCGTTGG 634
Query 303 TGTCGGCGGCGAAGGTGGGATTCGCGACGACGGTACTATTCACTCTGACGTCGGTGGTTA 362
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 635 TGTCGGCGGCGAAGGTGGGATTAGCGACGACGGTACTATTCACTCTGACGTCGGTGGTTA 694
Query 363 TTTTCCGATCATCGAACAGGGGATGACGACAACAGGAGAATGTAGATACAGACAAGCCAT 422
|||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 695 TTTTCCCATCATCGAACAGGGGATGACAACAACAGGGGAATGTAGATACAGACAAGCCAT 754
Query 423 TCCTAAAGGTCTTGGAGGCCTTCTCGACATAGACTCCAATTATGGATTTCGTAAACAGTT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 TCCTAAAGGTCTTGGAGGCCTTCTCGACATAGACTCCAATTATGGATTTCGTAAACAGTT 814
Query 483 TCTTCCTCAGGGGAACAGAAGATACACTCCTCTCCGGCAACCAACGGCACAAAAAGTGAT 542
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 815 TCTTCCTCAGGGGAACAGAAGATACACTCCTCTCCAACAACCAACGGCACAAAAAGTGAT 874
Query 543 CGCCGACAAAATTTCCGAAGGTCCAACCACTGTGATCCTGATCGGATCCCACACCAATTT 602
|| ||||||||||||||||||||||||||| || ||||| |||||||||||||||||||
Sbjct 875 CGTCGACAAAATTTCCGAAGGTCCAACCACCGTAATCCTTCTCGGATCCCACACCAATTT 934
Query 603 CGCACTTTTCTTGATGTCAAACCCTCACTTGAAACACAACATCCAACACATCTACATCAT 662
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 935 TGCACTCTTCTTGATGTCAAATCCTCACTTGAAACACAACATCCAACACATCTACATCAT 994
Query 663 GGGCGGTGGTGTCCGGTCACAAAACCCCACCGGCTGCTGTCCGGCGAACTCCACTGCTG- 721
||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | ||
Sbjct 995 GGGCGGTGGTGTCCGATCACAAAACCCCACCGGCTGTTGTCCGGCGAACTCCACGG-TGG 1053
Query 722 CGGAATGTCAACCTCGACAGTGTGGGAACCGTGGAAACTTGTTCACAGATTATACAAGTA 781
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1054 CGGAATGTCAACCACGACAGTGCGGGAACCGTGGAAACTTGTTCACAGATTATACAAGTA 1113
Query 782 ATCCTTACGCTGAATTCAACATCTTCGCTGATCCTTTCGCTTCTTACCAGGTGTTTCATT 841
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1114 ATCCTTACTCTGAATTCAACATCTTCGCTGATCCTTTCGCTGCTTACCAGGTGTTTCATT 1173
Query 842 CAGGTGTTCCAGTGACTCTGGTTCCTCTAGATGCAACCAACACTATTCCGATCAACCAGA 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 CAGGTGTTCCAGTGACTCTGGTTCCTCTAGATGCAACCAACACTATTCCGATCAACCAGA 1233
Query 902 AGTTCTTCGAGACATTCGAGAAGAA---CCAGAGAACATACGAAGCTCAATACGTTTTCT 958
||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1234 AGTTCTTTGAGACATTCGAGAATAATTACCAGAGAACATACGAAGCTCAATACGTTTTCT 1293
Query 959 TATCTCTGAAAATCGCCAGAGACACTTGGTTCGACGATGAATTCTATAAGAGCTACTTCA 1018
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1294 TATCTCTGAAAATCGCCAGAGACACTTGGTTCGACGATGAATTCTACAAGAGCTACTTCA 1353
Query 1019 TGTGGGATTCTTTCACGGCTGGTGTTGCAGTCTCAATTATGAGAAACTCTGGTAA----- 1073
||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 1354 TGTGGGATTCTTTCACGGCTGGTGTTGCAGTCTCAATCATGAGAAACTCTGCTAATAAGA 1413
Query 1074 -CAACAAAAATGGTGAGAACGATTTCGCGGAGATGGAGTATATGAACATAACCGTTGTTA 1132
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 ACAACAAAAATGGTGAGAACGATTTCGCGGAGATGGAGTATATGAACATAACCGTTGTTA 1473
Query 1133 CTTCAAACAAACCTTATGGAAGATCCGACGGCTCAAATCCATTCTTTGATAATAGAAGAA 1192
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1474 CTTCAAACAAACCTTATGGAAGATCAGATGGCTCAAATCCATTCTTTGATAATAGAAGAA 1533
Query 1193 CTCCAAAGTTTAACCTAACCGTTGGAGGAGTTCATAGTGGTCATGTTCAGATGGGTTTGC 1252
||||||| ||||||||| || ||||||||||||| |||||||||||||||| ||||||||
Sbjct 1534 CTCCAAAATTTAACCTAGCCCTTGGAGGAGTTCACAGTGGTCATGTTCAGACGGGTTTGC 1593
Query 1253 GAGATCCAGCTTGCTTACCAAAAAGCGGAAAAGGAAGAGGAAAGTGTAAGGATGGTTACA 1312
|||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 1594 GAGATCCAACTTGCTTACCGAAAAGCGGAATAGGAAGAGGAAAGTGTAAGGATGGTTACA 1653
Query 1313 CACAAGAGATCTCTGGACCTGATTCTGTTCGTGTTCTTGTCGCGACACGAGCTAAACCCA 1372
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct 1654 CACAAGAGATCTCTGGTTCTGATTCTGTTCGTGTTCTTGTTGCGACACGAGCTAAACCCA 1713
Query 1373 ACATAAACATCAAAAGTAAACTTGACAGAGAGTTCTATGTTGATTTCCTGGAAGTTTTGA 1432
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1714 ACATAAACATCAAAAGTAAACTTGACAGAGAATTCTATGTTGATTTCCTGGAAGTTTTGA 1773
Query 1433 ATAGACCTGAAGAAACGGGGAGATTTAACTTTTCATCTCAGTTTCCATACTACAAAGAAG 1492
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 ATAGACCTGAAGAAACAGGGAGATTTAACTTTTCATCTCAGTTTCCATACTACAAAGAAG 1833
Query 1493 AACTGTTTAGACCAGATCTTAGCAAAACACGTCTCGGAAAGCCTGTTGTTTTCGATATGG 1552
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1834 AATTGTTTAGACCAGATCTTAGCAAAACACGTCCCGGAAAGCCTGTTGTTTTCGATATGG 1893
Query 1553 ACATGAGCGCCGGAGATTTCCTTTCTCTCTTCTACCTCCTCAAAGTTCCAGTGGA-AGAA 1611
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct 1894 ACATGAGCGCCGGAGATTTCCTCTCTCTCTTCTACCTCCTCAAAGTTCCGGTGGATA-AA 1952
Query 1612 ATCGATTTGAAGGCTATTATTGTGAGCCCAACTGGTTGGGCTAATGCAGCAACAATCGAC 1671
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1953 ATCGATTTGAAGGCTATTATTGTGAGCCCAACCGGTTGGGCTAATGCAGCAACAATAGAC 2012
Query 1672 GTGGTCTATGATCTGCTTCATATGATGGGTCGGGACGACATTCCAGTCGGTCT-GGGAGA 1730
|||||||||||||||||||||||||||||||||||||| |||||||| || || ||||||
Sbjct 2013 GTGGTCTATGATCTGCTTCATATGATGGGTCGGGACGATATTCCAGTGGG-CTTGGGAGA 2071
Query 1731 CATGTTGGCATTGAACCAATCCGACCCGATTTTCCCACCGGTTGGAGGTTGCAAATACGT 1790
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 2072 CATGTTGGCATTGAACCAATCCGACCCGATTTTTCCACCGGTTGGAGGTTGCAAGTACGT 2131
Query 1791 CAAGGCTGTTCCACGAGGCTGTGGCGGATTTCTGGATTCCGACACTCTCTACGGTCTTGC 1850
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2132 CAAGGCTATTCCACGAGGCTGTGGCGGATTTCTGGATTCCGACACTCTCTACGGTCTTGC 2191
Query 1851 TCGTGACCTTCCGAGAAGCCCACGCAGATACACTGCAGAGAATTCAGT-AGCAGATGGAG 1909
||||||||||||||||||||| |||||||||||||||||||||||||| | || ||||||
Sbjct 2192 TCGTGACCTTCCGAGAAGCCCTCGCAGATACACTGCAGAGAATTCAGTGA-CACATGGAG 2250
Query 1910 CTCCGAGGGACACTGATCGGCCTGAACTCCGACAACCTCTGGCTCTTGAAGTTTGGCAAA 1969
|||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 2251 CTCCCAGGGACACTGATAGGCCTGAACTCCGACAACCTCTGGCTATTGAAGTTTGGCAAA 2310
Query 1970 ATCTAACCAAATCTGGTAACGGAGTGTCTAATATCACTGTACTAACCAGTGGACCGTTGA 2029
|||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |
Sbjct 2311 ATCTGACCAAATCTGGTAATGGAGTGTCTAAGATCACTGTACTAACCAATGGACCGTTAA 2370
Query 2030 CTAGCTTAGCCAAGATTATCTCATCAGATAAAAAATCATCCTCAATAATCAAGGAAGTTT 2089
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2371 CTAACTTAGCCAAGATTATCTCATCAGATAAAAAATCATCCTCACTAATCAAGGAAGTTT 2430
Query 2090 ACATCGTGGGTGGACATATAAACCCTGAGAAATCAGACAAAGGGAATATATTCACGGTTC 2149
|||||||||||||||||||||||| ||||||||||||||||||||| || |||||| |||
Sbjct 2431 ACATCGTGGGTGGACATATAAACCGTGAGAAATCAGACAAAGGGAACATTTTCACGATTC 2490
Query 2150 CTTCGAATGCATATGCTGAATTCAATATGTTTCTTGATCCTTTAGCAGCTAAGACCGTTC 2209
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2491 CTTCAAATGCATATGCTGAATTCAATATGTTTCTTGATCCTTTAGCAGCTAAGACCGTTC 2550
Query 2210 TTGAATCCGGTCTAAACATCACACTCATCCCTCTAGCAACCCAACGCAAGTT---TTCTT 2266
||||||||| |||||||||||||||| ||||||||||||| |||| |||||| |||||
Sbjct 2551 TTGAATCCGCTCTAAACATCACACTCGTCCCTCTAGCAACACAACACAAGTTGAGTTCTT 2610
Query 2267 TCCAACCAATGCTTAATAGACTCAATCCCTC-AGCGAAAACACCCGAAGCTCGGTTTGTG 2325
||||| |||||||| |||||||| || |||| | |||||||||| |||||||||||||||
Sbjct 2611 TCCAAACAATGCTTGATAGACTCTATTCCTCGA-CGAAAACACCAGAAGCTCGGTTTGTG 2669
Query 2326 AGACGGCTGCTTGCAAGATTGCAAGCTCTTCATCAGAAACACAGGAGATACACGCACATG 2385
| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2670 AAACGGTTGCTTGTAAGATTGCAAGCTCTTCATCAGAAACACAGGAGATACACGCACATC 2729
Query 2386 GACATGTTCTTAGGGGAAATTATTGGAGCAGTT-TTCTTGGGAGGCGATCACGCTTCATT 2444
|||||||||||||||||| || ||||||||||| || |||||||||||| |||||||| |
Sbjct 2730 GACATGTTCTTAGGGGAAGTTCTTGGAGCAGTTCTT-TTGGGAGGCGATGACGCTTCACT 2788
Query 2445 GAAGCCGAAACTGAGAGCTGAGCACTTAAAAGTGATCGCTGAAGGGGACGAATCGATAGA 2504
|||||||||| ||||||| |||||| ||||||||||||| |||||||| ||||||| |||
Sbjct 2789 GAAGCCGAAAATGAGAGCCGAGCACATAAAAGTGATCGCGGAAGGGGATGAATCGAGAGA 2848
Query 2505 TGGTAAGATATTGATTGATAAACTGCGCGGCAAACAAATAAAGATACTCGAAATAGTAGA 2564
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2849 TGGTAAGATATTGATCGATAAACTGCGCGGCAAACAAATAAAGATACTCGAAAGAGTAGA 2908
Query 2565 TCTGAGAAGCTTCTCTGAGAGTTTTACTTCTAGACTCGATGATAAGAAACAATCAGCAGT 2624
|| | |||| |||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 2909 CCTAATAAGCATCTCTGAGAGTTTTGCTTCTAGACTCGATGATAAGAAACAATCTGCAGT 2968
Query 2625 CATAGGAAGCTTTGAAGAACAAAAGAAAAAATGGAGCACACCACCAAGCTGA 2676
|||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 2969 AATAGGAAGCTTTGAAGAACAAAAGAAGATATGGAGCACACCACCAAGCTGA 3020
> AT5G18890.1 | Symbols: | Inosine-uridine preferring nucleoside
hydrolase family protein | chr5:6301652-6304088 FORWARD LENGTH=1653
Length=1653
Score = 1818 bits (984), Expect = 0.0
Identities = 1407/1611 (87%), Gaps = 29/1611 (2%)
Strand=Plus/Plus
Query 1072 AACAACAA-AAATGGTGAGAACGATTTCGCGGAGATGGAGTATATGAACATAACCGTTGT 1130
|||||||| ||| ||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 28 AACAACAATAAA-GGTCAGAATGATTTCGCGGAGATGGAGTATATGAACATAACCGTTGT 86
Query 1131 TACTTCAAACAAACCTTATGGAAGATCCGACGGCTCAAATCCATTCTTTGATAATAGAAG 1190
|||||||||| ||||||||||| || |||| | ||||||||||||||| |||| |||||
Sbjct 87 TACTTCAAACGAACCTTATGGATTATTCGACAGTTCAAATCCATTCTTTTATAAAAGAAG 146
Query 1191 AACTCCAAAGTTTAACCTAACCGTTGGAGGAGTTCATAGTGGTCATGTTCAGATGGGTTT 1250
|||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||||||
Sbjct 147 AACTCCAAAGTTTAACCTAACCCTTGGAGGAGTTCACAGTGGCCATGTTCAGAGGGGTTT 206
Query 1251 GCGAGATCC-AGCTTGCTTACCAAAAAGCGGAAAAGGAAGAGGAAAGTGTAAGGATGGTT 1309
||| || || | | ||| || | | ||||| | || |||||| || | ||||||||
Sbjct 207 GCGCGACCCAATC-TGCATATCGACTAGCGG---A--AA-AGGAAACTGCAGGGATGGTT 259
Query 1310 ACACACAAGAGATCTCTGGACCTGATTCTGTTCGTGTTCTTGTCGCGACACGAGCTAAAC 1369
||||| |||||| ||| ||||||||||| |||||||| |||||||| |||||||||||||
Sbjct 260 ACACAAAAGAGACCTCCGGACCTGATTCAGTTCGTGTACTTGTCGCAACACGAGCTAAAC 319
Query 1370 CCAACATA-AACATCAAAAGTAAACTTGACAGAGAGTTCTATGTTGATTTCCTGGAAGTT 1428
| | || | ||| | || ||| |||| || ||||| || |||| | |||| ||||||||
Sbjct 320 CGAGCA-AGAACTTGAATAGTGAACTGGATAGAGAATTTTATGATCATTTTTTGGAAGTT 378
Query 1429 TTGAATAGACCTGAAGAAACGGGGAGATTTAACTTTTCATCTCAGTTTCCATACTACAAA 1488
|||||||| ||||||||||||||||| ||| |||||||| ||||||||| || |||| |
Sbjct 379 TTGAATAGGCCTGAAGAAACGGGGAGGTTTCACTTTTCAACTCAGTTTCTGTATTACAGA 438
Query 1489 GAAGAACTGTTTAGACCAGATCTTAGCAAAACACGTCT---CGGAAAGCCTGTTGTTTTC 1545
|||||| |||| | | |||| |||| || |||| || ||||||||||||||||||
Sbjct 439 GAAGAATTGTTCATAGCAGAACTTAATAACTCACGGCTGGGAGGAAAGCCTGTTGTTTTC 498
Query 1546 GATATGGACATGAGCGCCGGAGATTTCCTTTCTCTCTTCTACCTCCTCAAAGTTCCAGTG 1605
||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct 499 GATATGGACATGAGCGCCGGAGATTTCCTCTCTCTCTTTTATCTCCTTAAAGTTCCAGTG 558
Query 1606 GAAGA-AATCGATTTGAAGGCTATTATTGTGAGCCCAACTGGTTGGGCTAATGCAGCAAC 1664
||| | || ||||||||||| |||| ||||||||||| |||||||||||| |||| ||
Sbjct 559 GAA-ATCATAGATTTGAAGGCGGTTATCGTGAGCCCAACCGGTTGGGCTAATACAGCGAC 617
Query 1665 AATCGACGTGGTCTATGATCTGCTTCATATGATGGGTCGGGACGACATTCCAGTCGGTCT 1724
||| || |||||||| |||||||| ||||||||||| || || |||||||| |||||| |
Sbjct 618 AATTGATGTGGTCTACGATCTGCTGCATATGATGGGACGCGATGACATTCCGGTCGGTTT 677
Query 1725 GGGAGACATGTT-GGCATTGAACCAATCCGACCCGATTTTCCCACCGGTTGGAGGTTGCA 1783
||||| ||||| | |||| |||||||| || ||| |||| ||| | | ||| | ||||
Sbjct 678 AGGAGATATGTTCGCCATT-AACCAATCTGAACCGGTTTTTCCATCTGCTGGTGACTGCA 736
Query 1784 AATACGTCAAGGCTGTTCCACGAGGCTGTGGCGGATTTCTGGATTCCGACACTCTCTACG 1843
| |||| ||| || ||||||| ||| |||||||| ||||| ||||||||||||||||| |
Sbjct 737 AGTACGCCAAAGCGGTTCCACAAGGTTGTGGCGGTTTTCTTGATTCCGACACTCTCTATG 796
Query 1844 GTCTTGCTCGTGACCTTCCGAGAAGCCCACGCAGATACACTGCAGAGAATTCAGTAGCAG 1903
| |||||||||||||| || |||||||| ||||| | | | ||||| ||||| |||
Sbjct 797 GCCTTGCTCGTGACCTCCCAAGAAGCCCTCGCAGGT--A-T---GAGAACTCAGTGGCAC 850
Query 1904 ATGGAGCTCCGAGGGACACTGATCGGCCTGAACTCCGACAACCTCTGGCTCTTGAAGTTT 1963
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 851 ATGGAGCTCCGAGCGACACTGATCGGCCTGAACTCCGACAACCTCTGGCCCTTGAAGTTT 910
Query 1964 GGCAAAATCTAACCAAATCTGGTAACGGAGTGTCTAATATCACTGTACTAACCAGTGGAC 2023
|||||||||| |||||||||| | | | ||||||||| ||||| |||||||||| |||||
Sbjct 911 GGCAAAATCTGACCAAATCTGTTGATGAAGTGTCTAAGATCACCGTACTAACCAATGGAC 970
Query 2024 CGTTGACTAGCTTAGCCAAGATTATCTCATCAGATAAAAAATCATCCTCAATAATCAAGG 2083
| || |||||||||||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct 971 CATTAACTAGCTTAGCCAAAATCATCTCATCAGATAAAAACTCATCCTCAATAATCAAGG 1030
Query 2084 AAGTTTACATCGTGGGTGGACATATAAACCCT-GAGAAATCAGACAAAGGGAATATATTC 2142
||||||||||||||||||||||||||| || | || ||||||||||||||||| ||||||
Sbjct 1031 AAGTTTACATCGTGGGTGGACATATAAGCCGTGGA-AAATCAGACAAAGGGAACATATTC 1089
Query 2143 ACGGTTCCTTCGAATGCATATGCTGAATTCAATATGTTTCTTGATCCTTTAGCAGCTAAG 2202
|| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct 1090 ACAGTTCCTTCGAATTCCTACGCTGAATTCAATATGTTTCTTGATCCTTTAGCAGCTAAG 1149
Query 2203 ACCGTTCTTGAATCCGGTCTAAACATCACACTCATCCCTCTAGCAACCCAACGCAAGTTT 2262
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1150 ACTGTTCTTGAATCCGGTCTAAACATCACACTCATCCCTCTAGCAACCCAACGCGAGTTT 1209
Query 2263 TCTTTCCAACCAATGCTTAATAGACTCAATCCCTC-AGCGAAAACACCCGAAGCTCGGTT 2321
||||||||| ||||||||||||||||| || |||| | ||||||||||||||||||||||
Sbjct 1210 TCTTTCCAAGCAATGCTTAATAGACTCTATTCCTCGA-CGAAAACACCCGAAGCTCGGTT 1268
Query 2322 TGTGAGACGGCTGCTTGCAAGATTGCAAGCTCTTCATCAGAAACACAGGAGATACACGCA 2381
||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1269 TGTGAAACGGCTGCTTACAAGATTGCAAGCTCTTCATCAGAAACAGAGGAGATACATGCA 1328
Query 2382 CATGGACATGTTCTTAGGGGAAATTATTGGAGCAGTTTTCTTGGGAGGCGATCACGCTTC 2441
||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||
Sbjct 1329 CATGGACATGTTCTTAGGGGAAATTCTTGGAGCAATTTTCTTGGGAGGAGATCACGCTTT 1388
Query 2442 ATTGAAGCCGAAACTGAGAGCTGAGCACTTAAAAGTGATCGCTGAAGGGGACGAATCGAT 2501
||||||||||||| || || ||||| || ||||||||||||||||||| || |||||||
Sbjct 1389 ATTGAAGCCGAAAATGCGAACTGAGTACATAAAAGTGATCGCTGAAGGAGATGAATCGAA 1448
Query 2502 AGATGGTAAGATATTGATTGATAAACTGCGCGGCAAACAAATAAAGATACTCGAAATAGT 2561
|||||| | ||||||||||| ||||||||||| |||||||||||||||||||||| |||
Sbjct 1449 AGATGGCCACATATTGATTGACAAACTGCGCGGAAAACAAATAAAGATACTCGAAAGAGT 1508
Query 2562 AGATCTGAGAAGCTTCTCTGAGAGTTTTACTTCTAGACTCGATGATAAGAAACAATCAGC 2621
||| ||||| ||| || |||||||||| |||||||||||||||||||||||||||| ||
Sbjct 1509 GGATTTGAGAGGCTGCTATGAGAGTTTTGCTTCTAGACTCGATGATAAGAAACAATCTGC 1568
Query 2622 AGTCATAGGAAGCTTTGAAGAACAAAAGAAAAAATGGAGCACACCACCAAG 2672
|||||||||||||||||||||||||| || ||||||| ||||||||||||
Sbjct 1569 AGTCATAGGAAGCTTTGAAGAACAAAGGATGAAATGGAACACACCACCAAG 1619
> AT5G18870.1 | Symbols: | Inosine-uridine preferring nucleoside
hydrolase family protein | chr5:6298386-6300289 FORWARD LENGTH=777
Length=777
Score = 132 bits (71), Expect = 2e-29
Identities = 79/83 (95%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 754 GGAAACTTGTTCACAGATTATACAAGTAATCCTTACGCTGAATTCAACATCTTCGCTGAT 813
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 673 GGAAACTTGTTCACAGATTATACAAGTAATCCTTACGCTGAATTCAACATCTTCACCGAT 732
Query 814 CCTTTCGCTTCTTACCAGGTGTT 836
||||| ||| |||||||||||||
Sbjct 733 CCTTTTGCTGCTTACCAGGTGTT 755
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132892232007
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5